BAC Information

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BAC

Clone NameB6Ng01-212O24
Chromosome4 (Build37)
Map Location 25,493,344 - 25,494,482
singlet/doubletsinglet
Overlap genenone
Upstream geneF730047E07Rik, Klhl32, 1110007M04Rik, C230012O17Rik, Gpr63, Fhl5, 1810074P20Rik, Prdx6-rs2, LOC665019, LOC625732
Downstream geneFut9, LOC100040780, Hn1-ps1, Manea, Bhmt-ps1, LOC665079, Gng2-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212O24.bB6Ng01-212O24.g
ACCGA030606GA030607
length1,155265
definitionB6Ng01-212O24.b B6Ng01-212O24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatctactctattattgaggacttcgttaggatgaccttcatat
attttatgatgttttcactctactgagttttcataacgcccctcaaatgt
tccttaattctagctgtctctcttcacattccctccatcaactttatctt
tctttcccttcttacctgatcctcttgttcccattctcccacccttactg
tgactattaaatctattctatttccccctcccagagagattcatgcaccc
ctctagtcccttatgctattcttaacctcgctgggtctgtagtttgtaga
ttgattattatttacttaacagataatatccacatataagtgaatgtata
ctatatttatatttcttggtcttgattacagcatccaggttatttttttc
taattccatccatttgcctgtgaatttcatgatgtaatatttcatttctt
ttttttttttgaataactttaagataaaaatattttattttagtgtaaaa
cattttcagtaagaaacttacttgacagaaaagatatcatggtcaaaaag
ctggttttcccagggttagacttacccatttcactcttgatgtaagaagc
cctgtgattttccccaaatgggaagctagactacataatgtgtggtaatg
agagactgtgtttatgctgttccctttattaacagaaaccaaaaattata
ttgttatgttaaatttatcattaaacagttaaagaacatgtctaactttt
tttttccattttttattaggtatttcgctcatttacatttgcaatgctat
accaaaagtcccccatagccacccaccccctctcccctaccccacccact
cccctttttatggccctggcgttccccctgtactgggggcatattaaagt
ttgcgtgtccaatgggccctctctttccagtgatggccgactaggccatc
cttttgatgcatatgcagctagagtcaagagctccgggtacctgtttagt
tcataatgttgttccacctataggttttgcagaatccctttagcttcttt
tggaactttctctagcttctccattgggggccatgtgaatcattccacat
agcgaacttgtgaagcaatccacttcttatgtttgctaggccaggccata
ctctg
tcagccgtgagaaagagaagagggaaatctcacccgagggaaagcacagg
agtagatctgagctcaagaaatcttctctgggaccatgcaaatggtcact
ctgaccagtggggatggggtcttaccagatctgagcgtggttgtggctga
gatgggatgcaaacctgcagagtttctggatccaagtcacagtacagcaa
tgtgtatataaaaagataaagagatattaatatatgttctaaggtggtgt
ggtgaggtgtggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_25493344_25494482
seq2: B6Ng01-212O24.b_47_1201 (reverse)

seq1  CAGAGTATGCCTGGGCCTAGCAAACAT-AGAAGTGGA-TGC-TCAC-AGT  46
      ||||||||| |  |||||||||||||| ||||||||| ||| |||| |||
seq2  CAGAGTATGGCCTGGCCTAGCAAACATAAGAAGTGGATTGCTTCACAAGT  50

seq1  CGGCTAT-TGG-ATGGATCACATGGCCCCCAATGAAGGAGCTAGAGAAAG  94
        ||||| ||| |||  ||||||||||||||||| || ||||||||||||
seq2  TCGCTATGTGGAATGATTCACATGGCCCCCAATGGAGAAGCTAGAGAAAG  100

seq1  TACC-AAAGAAGCTAAAGGGA-TCTGC-AACCCTATAGGTGGAACAACAT  141
      | || |||||||||||||||| ||||| || |||||||||||||||||||
seq2  TTCCAAAAGAAGCTAAAGGGATTCTGCAAAACCTATAGGTGGAACAACAT  150

seq1  TATGAACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGCATC  191
      |||||||||| |||   |||||||||||||||||||||||||||||||||
seq2  TATGAACTAAACAGGTACCCGGAGCTCTTGACTCTAGCTGCATATGCATC  200

seq1  AAAA-GATGGCCTAGTCGGCCATCACTGGAAAGAGA-GGCCCATTGGACA  239
      |||| ||||||||||||||||||||||||||||||| |||||||||||||
seq2  AAAAGGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGGCCCATTGGACA  250

seq1  CGCAAACTTT-ATATG-CCCCAGTACA-GGGGAACGCCAGGGCCAT-AAA  285
      |||||||||| ||||| |||||||||| |||||||||||||||||| |||
seq2  CGCAAACTTTAATATGCCCCCAGTACAGGGGGAACGCCAGGGCCATAAAA  300

seq1  AGGGGAGTGGGT-GGGTAGGGGAGAGGGGGTGGGTGGCTATGGGGGACTT  334
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGGGGAGTGGGTGGGGTAGGGGAGAGGGGGTGGGTGGCTATGGGGGACTT  350

seq1  TTGGTATAGCATTGCAAATGTAAATGAGCGAAATACCTAATAAAAAATGG  384
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTATAGCATTGCAAATGTAAATGAGCGAAATACCTAATAAAAAATGG  400

seq1  AAAAAAAAAGTTAGACATGTTCTTTAACTGTTTAATGATAAATTTAACAT  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAGTTAGACATGTTCTTTAACTGTTTAATGATAAATTTAACAT  450

seq1  AACAATATAATTTTTGGTTTCTGTTAATAAAGGGAACAGCATAAACACAG  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATATAATTTTTGGTTTCTGTTAATAAAGGGAACAGCATAAACACAG  500

seq1  TCTCTCATTACCACACATTATGTAGTCTAGCTTCCCATTTGGGGAAAATC  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCATTACCACACATTATGTAGTCTAGCTTCCCATTTGGGGAAAATC  550

seq1  ACAGGGCTTCTTACATCAAGAGTGAAATGGGTAAGTCTAACCCTGGGAAA  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGCTTCTTACATCAAGAGTGAAATGGGTAAGTCTAACCCTGGGAAA  600

seq1  ACCAGCTTTTTGACCATGATATCTTTTCTGTCAAGTAAGTTTCTTACTGA  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCTTTTTGACCATGATATCTTTTCTGTCAAGTAAGTTTCTTACTGA  650

seq1  AAATGTTTTACACTAAAATAAAATATTTTTATCTTAAAGTTATTCAAAAA  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTTTACACTAAAATAAAATATTTTTATCTTAAAGTTATTCAAAAA  700

seq1  AAAAAAAGAAATGAAATATTACATCATGAAATTCACAGGCAAATGGATGG  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAGAAATGAAATATTACATCATGAAATTCACAGGCAAATGGATGG  750

seq1  AATTAGAAAAAAATAACCTGGATGCTGTAATCAAGACCAAGAAATATAAA  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGAAAAAAATAACCTGGATGCTGTAATCAAGACCAAGAAATATAAA  800

seq1  TATAGTATACATTCACTTATATGTGGATATTATCTGTTAAGTAAATAATA  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTATACATTCACTTATATGTGGATATTATCTGTTAAGTAAATAATA  850

seq1  ATCAATCTACAAACTACAGACCCAGCGAGGTTAAGAATAGCATAAGGGAC  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATCTACAAACTACAGACCCAGCGAGGTTAAGAATAGCATAAGGGAC  900

seq1  TAGAGGGGTGCATGAATCTCTCTGGGAGGGGGAAATAGAATAGATTTAAT  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGGGTGCATGAATCTCTCTGGGAGGGGGAAATAGAATAGATTTAAT  950

seq1  AGTCACAGTAAGGGTGGGAGAATGGGAACAAGAGGATCAGGTAAGAAGGG  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACAGTAAGGGTGGGAGAATGGGAACAAGAGGATCAGGTAAGAAGGG  1000

seq1  AAAGAAAGATAAAGTTGATGGAGGGAATGTGAAGAGAGACAGCTAGAATT  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGATAAAGTTGATGGAGGGAATGTGAAGAGAGACAGCTAGAATT  1050

seq1  AAGGAACATTTGAGGGGCGTTATGAAAACTCAGTAGAGTGAAAACATCAT  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAACATTTGAGGGGCGTTATGAAAACTCAGTAGAGTGAAAACATCAT  1100

seq1  AAAATATATGAAGGTCATCCTAACGAAGTCCTCAATAATAGAGTAGATGG  1134
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATATGAAGGTCATCCTAACGAAGTCCTCAATAATAGAGTAGATGG  1150

seq1  AATTC  1139
      |||||
seq2  AATTC  1155