BAC Information

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BAC

Clone NameB6Ng01-213A02
Chromosome4 (Build37)
Map Location 54,117,065 - 54,118,172
singlet/doubletsinglet
Overlap genenone
Upstream geneAbca1, 4930522O17Rik, AI427809, LOC100041197, Slc44a1, Fsd1l, LOC666483, Fcmd, Tal2, LOC435784, Tmem38b, LOC670124, LOC100041280
Downstream geneLOC666901, LOC100041303, LOC384018, EG666920, Zfp462
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-213A02.bB6Ng01-213A02.g
ACCGA030654GA030655
length8231,104
definitionB6Ng01-213A02.b B6Ng01-213A02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaaaggatttcctgtcactgacaaggacggatttgttaaaggtc
tctcaaggaaatggacaatagctaattaattgagctctccatgactgtct
gtcctgtcgtttttcatttatctgctctggtttcttacctcgcaggtcta
ccttctctctctctctctctctctctctctctctctctctctctctctct
ctccctctctcacacacacacacccccccccacagacagacagacacaca
cacctatctctctctcactcctgtttgtcctgtatgtgtgaaagggtata
tatatatacactctccatcttctcacactcactctctatttccttgtaca
aagaaagatgtaatattttgtgcggtatccaccactgtaagagtaaatgt
atatttccccccacagagaagagagaagagggagagagtctgctgagtgt
gtatgcgcacatatatatgtgagagagcaagtgtatgtctctgagagagt
tctataaatatatatactctgtgtgtggagagagagccacgcttctctct
acacgactcgctgtctgtgtgtgagtgtgtatctatatatacgtgacatc
atacactaccacacatctgtcagtgtgtgagagagagtagaggagagata
gagactgtagatgagagtatatactgtcagcgcgagagagagtgtgtaca
agagctactgtctacatcacagagacatctctctcaagtgcgtatactac
acatgatctcgcgagtctgcagacactctagagaggcgcgtgatcagaca
ctagcttccaatatgtatatcgc
gaattccaagcttaccaatacatctctacagaaggaaaattagtgggaaa
aataatgtatttcacattccagggaaggcataccagagaagtctgattca
attgcttattaatagcttcaagaaagaaatcccacaccaacgcagagaga
gacagaaagctgggcatataatccctccaacccaatagaacctggggtga
ccacatttccagcaagaaaagagcagtgtcaagagtactagatgtgtgta
aaatccatacttccgtaaatatatgtgagtggattactttgggacaggga
ctttttatctgcttttaaaacttaacgacaagccgacatacctccagtag
aggtataaactaattatagaaaaatgaaaaacagaacaagtttttatata
aagaaatgatagtgagtgctctggagatgctgggattacagtgcactgaa
tgacgtgcctgccattccaccgatccgggtttcccgatgctggcactgct
gcctgtggaagtggtgtggaatgagacagacctaaagttaacactgcctc
tcactctgttaagcagttagctcgtggtaacagaactcactggcctggtg
acactctagtgcctactaggcacatttctaaaaggaagcagggtggatgt
gcccaaaagtctccattatttggcatgtctcttccctcctgtcttctcct
ggaccagtctatatgtaggcatactctgctcttgctctacctttagtctc
cagagaaggcagagatcctccaggagacccttgtttggctgagaagaacc
caggattcctgccccacaccacacccccggctcttcaggagtcctccagc
ctttcctctgactggcaacaaagtaagcaaatggcgttgttcattctgga
cactttccgctgttttccattcttactggaacctaggaaaccctttcccc
agtgtcccacctagctattgtcagagaactgggcatttaagagaggagca
tttacgtgacattccccgatcactaataaaaatgattatttggaattctt
ttctgtttctatttcactctaggagactgagtactgtttctaggacccac
tcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_54117065_54118172
seq2: B6Ng01-213A02.g_64_1167 (reverse)

seq1  TAGAGTGGGTCCTAG--ACAGTTACTTCCTGTCTTCTAGGAAGTGAAATA  48
      |||||||||||||||  |||| ||||  | |||| ||||  |||||||||
seq2  TAGAGTGGGTCCTAGAAACAG-TACT--CAGTCTCCTAG--AGTGAAATA  45

seq1  GAAAACAGAAAAGGAATCCAAAT-ATCATTTTTATTAGTGATTCGGGGAA  97
      | ||||||||||| | ||||||| ||||||||||||||||| |||||| |
seq2  G-AAACAGAAAAGAATTCCAAATAATCATTTTTATTAGTGA-TCGGGG-A  92

seq1  ATGTCACGTAAATGCTCCTCTCTTAAATGCCAGGTTCTCTGACAATAGCT  147
      |||||||||||||||||||||||||||||||  |||||||||||||||||
seq2  ATGTCACGTAAATGCTCCTCTCTTAAATGCCCAGTTCTCTGACAATAGCT  142

seq1  AGGTGGGACACTGGGG-AAGGGTTTCCTAGGTTCCAGTAAGAATGGAAAA  196
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGGTGGGACACTGGGGAAAGGGTTTCCTAGGTTCCAGTAAGAATGGAAAA  192

seq1  CAGCGGAAAGTGTCCAGAATGAACAACGCCATTTGCTTACTTTGTTGCCA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGGAAAGTGTCCAGAATGAACAACGCCATTTGCTTACTTTGTTGCCA  242

seq1  GTCAGAGGAAAGGCTGGAGGACTCCTGAAGAGCCGGGGGTGTGGTGTGGG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAGGAAAGGCTGGAGGACTCCTGAAGAGCCGGGGGTGTGGTGTGGG  292

seq1  GCAGGAATCCTGGGTTCTTCTCAGCCAAACAAGGGTCTCCTGGAGGATCT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAATCCTGGGTTCTTCTCAGCCAAACAAGGGTCTCCTGGAGGATCT  342

seq1  CTGCCTTCTCTGGAGACTAAAGGTAGAGCAAGAGCAGAGTATGCCTACAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTCTCTGGAGACTAAAGGTAGAGCAAGAGCAGAGTATGCCTACAT  392

seq1  ATAGACTGGTCCAGGAGAAGACAGGAGGGAAGAGACATGCCAAATAATGG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACTGGTCCAGGAGAAGACAGGAGGGAAGAGACATGCCAAATAATGG  442

seq1  AGACTTTTGGGCACATCCACCCTGCTTCCTTTTAGAAATGTGCCTAGTAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTTGGGCACATCCACCCTGCTTCCTTTTAGAAATGTGCCTAGTAG  492

seq1  GCACTAGAGTGTCACCAGGCCAGTGAGTTCTGTTACCACGAGCTAACTGC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTAGAGTGTCACCAGGCCAGTGAGTTCTGTTACCACGAGCTAACTGC  542

seq1  TTAACAGAGTGAGAGGCAGTGTTAACTTTAGGTCTGTCTCATTCCACACC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAGAGTGAGAGGCAGTGTTAACTTTAGGTCTGTCTCATTCCACACC  592

seq1  ACTTCCACAGGCAGCAGTGCCAGCATCGGGAAACCCGGATCGGTGGAATG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCACAGGCAGCAGTGCCAGCATCGGGAAACCCGGATCGGTGGAATG  642

seq1  GCAGGCACGTCATTCAGTGCACTGTAATCCCAGCATCTCCAGAGCACTCA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCACGTCATTCAGTGCACTGTAATCCCAGCATCTCCAGAGCACTCA  692

seq1  CTATCATTTCTTTATATAAAAACTTGTTCTGTTTTTCATTTTTCTATAAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCATTTCTTTATATAAAAACTTGTTCTGTTTTTCATTTTTCTATAAT  742

seq1  TAGTTTATACCTCTACTGGAGGTATGTCGGCTTGTCGTTAAGTTTTAAAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTATACCTCTACTGGAGGTATGTCGGCTTGTCGTTAAGTTTTAAAA  792

seq1  GCAGATAAAAAGTCCCTGTCCCAAAGTAATCCACTCACATATATTTACGG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATAAAAAGTCCCTGTCCCAAAGTAATCCACTCACATATATTTACGG  842

seq1  AAGTATGGATTTTACACACATCTAGTACTCTTGACACTGCTCTTTTCTTG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATGGATTTTACACACATCTAGTACTCTTGACACTGCTCTTTTCTTG  892

seq1  CTGGAAATGTGGTCACCCCAGGTTCTATTGGGTTGGAGGGATTATATGCC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAATGTGGTCACCCCAGGTTCTATTGGGTTGGAGGGATTATATGCC  942

seq1  CAGCTTTCTGTCTCTCTCTGCGTTGGTGTGGGATTTCTTTCTTGAAGCTA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTTCTGTCTCTCTCTGCGTTGGTGTGGGATTTCTTTCTTGAAGCTA  992

seq1  TTAATAAGCAATTGAATCAGACTTCTCTGGTATGCCTTCCCTGGAATGTG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAAGCAATTGAATCAGACTTCTCTGGTATGCCTTCCCTGGAATGTG  1042

seq1  AAATACATTATTTTTCCCACTAATTTTCCTTCTGTAGAGATGTATTGGTA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACATTATTTTTCCCACTAATTTTCCTTCTGTAGAGATGTATTGGTA  1092

seq1  AGCTTGGAATTC  1108
      ||||||||||||
seq2  AGCTTGGAATTC  1104