BAC Information

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BAC

Clone NameB6Ng01-213C05
Chromosome4 (Build37)
Map Location 32,695,878 - 32,840,881
singlet/doubletdoublet
Overlap geneCasp8ap2, Mdn1
Upstream geneMap3k7, LOC665218, LOC665228, LOC665232, Bach2, Gja10
Downstream geneLyrm2, Ankrd6, LOC665298, Rragd, 4933421O10Rik, Ube2j1, LOC100039142, Gabrr2, Gabrr1, Acy1l2, Srrp, Pnrc1, Rngtt
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-213C05.bB6Ng01-213C05.g
ACCGA030754GA030755
length621398
definitionB6Ng01-213C05.b B6Ng01-213C05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,840,261 - 32,840,881)(32,695,878 - 32,696,272)
sequence
gaattcactgtagctgtctttattcacatcagaattgggcattggaaccc
attacagacggttgcgagctaccatgtggttgctgagaattgaactctgg
aagacctctggaagagtagccagtgctcttaacagctgatctatttctcc
agcacctaaactcagtgctttcattaaaatctaaacctactactgaagtc
ctgtgtcacatccacaccaaaggtcagcaccattcagaaaggctggatga
ttcagacactcggcactcactttctttttttttttttttttaaagattta
tttattatatgcgaggacactgtagctgtcttcagatgtaccagatgagg
gcatccgatctcattacagatggtagtgagccaccatgtggttgctggga
tttgaactcaggacgtccggaagagcagttggtgctcttaaccgctgagc
catctctccagctcccggcactcactttcaaggtgtgtacagttttagaa
agctagctggaaatgcttaagtattttcctacttaactacactatcatta
ttttctaacattcatttatttctgtgtgtgtgtgtgtgtgtgtgtgtgta
tgaaggtagttgtgtatatgt
atcttgggagattcatggttacaggattcatggctgtgggatttatggct
gctagattcagggttcctggattaacggctgccaggttcagggatgcaga
attcatggttataggattcatggtttccagactcatggtgtctagattca
tggctaccaaactcagggttgccagactcacggtttctggattcatggtt
cccagattcccagctgacagatgtcctccagatgaagtggcagcacctgg
cactcccacccgatggagtttgatgttgccaagacgaagcaaccagatca
gtgggtgctggaccccaagctccagagtcaccaggaagaagaagaaaagg
aggagaaagggggaaaggagggaggagggggaagggaggataaagggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_32840261_32840881
seq2: B6Ng01-213C05.b_45_665 (reverse)

seq1  ACATATACACAACTACCTTCATACACACACACACACACACACACACACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATACACAACTACCTTCATACACACACACACACACACACACACACAG  50

seq1  AAATAAATGAATGTTAGAAAATAATGATAGTGTAGTTAAGTAGGAAAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATGAATGTTAGAAAATAATGATAGTGTAGTTAAGTAGGAAAATA  100

seq1  CTTAAGCATTTCCAGCTAGCTTTCTAAAACTGTACACACCTTGAAAGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGCATTTCCAGCTAGCTTTCTAAAACTGTACACACCTTGAAAGTGA  150

seq1  GTGCCGGGAGCTGGAGAGATGGCTCAGCGGTTAAGAGCACCAACTGCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCGGGAGCTGGAGAGATGGCTCAGCGGTTAAGAGCACCAACTGCTCT  200

seq1  TCCGGACGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACTACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGGACGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACTACC  250

seq1  ATCTGTAATGAGATCGGATGCCCTCATCTGGTACATCTGAAGACAGCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTAATGAGATCGGATGCCCTCATCTGGTACATCTGAAGACAGCTAC  300

seq1  AGTGTCCTCGCATATAATAAATAAATCTTTAAAAAAAAAAAAAAAAAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCCTCGCATATAATAAATAAATCTTTAAAAAAAAAAAAAAAAAGAA  350

seq1  AGTGAGTGCCGAGTGTCTGAATCATCCAGCCTTTCTGAATGGTGCTGACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGTGCCGAGTGTCTGAATCATCCAGCCTTTCTGAATGGTGCTGACC  400

seq1  TTTGGTGTGGATGTGACACAGGACTTCAGTAGTAGGTTTAGATTTTAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTGTGGATGTGACACAGGACTTCAGTAGTAGGTTTAGATTTTAATG  450

seq1  AAAGCACTGAGTTTAGGTGCTGGAGAAATAGATCAGCTGTTAAGAGCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCACTGAGTTTAGGTGCTGGAGAAATAGATCAGCTGTTAAGAGCACT  500

seq1  GGCTACTCTTCCAGAGGTCTTCCAGAGTTCAATTCTCAGCAACCACATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACTCTTCCAGAGGTCTTCCAGAGTTCAATTCTCAGCAACCACATGG  550

seq1  TAGCTCGCAACCGTCTGTAATGGGTTCCAATGCCCAATTCTGATGTGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCGCAACCGTCTGTAATGGGTTCCAATGCCCAATTCTGATGTGAAT  600

seq1  AAAGACAGCTACAGTGAATTC  621
      |||||||||||||||||||||
seq2  AAAGACAGCTACAGTGAATTC  621

seq1: chr4_32695878_32696272
seq2: B6Ng01-213C05.g_64_458

seq1  GAATTCATCTTGGGAGATTCATGGTTACAGGATTCATGGCTGTGGGATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTTGGGAGATTCATGGTTACAGGATTCATGGCTGTGGGATTT  50

seq1  ATGGCTGCTAGATTCAGGGTTCCTGGATTAACGGCTGCCAGGTTCAGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTGCTAGATTCAGGGTTCCTGGATTAACGGCTGCCAGGTTCAGGGA  100

seq1  TGCAGAATTCATGGTTATAGGATTCATGGTTTCCAGACTCATGGTGTCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAATTCATGGTTATAGGATTCATGGTTTCCAGACTCATGGTGTCTA  150

seq1  GATTCATGGCTACCAAACTCAGGGTTGCCAGACTCACGGTTTCTGGATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCATGGCTACCAAACTCAGGGTTGCCAGACTCACGGTTTCTGGATTC  200

seq1  ATGGTTCCCAGATTCCCAGCTGACAGATGTCCTCCAGATGAAGTGGCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTCCCAGATTCCCAGCTGACAGATGTCCTCCAGATGAAGTGGCAGC  250

seq1  ACCTGGCACTCCCACCCGATGGAGTTTGATGTTGCCAAGACGAAGCAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGCACTCCCACCCGATGGAGTTTGATGTTGCCAAGACGAAGCAACC  300

seq1  AGATCAGTGGGTGCTGGACCCCAAGCTCCAGAGTCACCAGGAAGAAGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAGTGGGTGCTGGACCCCAAGCTCCAGAGTCACCAGGAAGAAGAAG  350

seq1  AAAAGGAGGAGAAAGGGGGAAAGGAGGGAGGAGGGGGAAGGGAGG  395
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAGGAGAAAGGGGGAAAGGAGGGAGGAGGGGGAAGGGAGG  395