BAC Information

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BAC

Clone NameB6Ng01-214F15
Chromosome4 (Build37)
Map Location 146,339,774 - 146,363,662
singlet/doubletdoublet
Overlap genenone
Upstream gene1700029I01Rik, LOC236069, LOC384084, LOC666386, LOC666390, LOC100041433, LOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498
Downstream geneLOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214F15.bB6Ng01-214F15.g
ACCGA031622GA031623
length1,098769
definitionB6Ng01-214F15.b B6Ng01-214F15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(146,339,774 - 146,340,871)(146,362,894 - 146,363,662)
sequence
gaattcttttctttttgtagactctagagaccaggtttttttccatattg
tgtcgcagtctaatcttgtaggacatttgtctgagggaaatgcaaaggca
gatacagattaacacattctcttttccttgggaatgtcggcataaaggaa
gcacaaatgttttatgtaaacttccattaatatgcagcattgataaaatg
agtttcaataacaacaacaataaacagattccttaacagaggtggaatgc
tcctcatgtgcaaaatttaatatttgtaacccttgtgactcacgcagtac
tgttgcaaaatcatgttttgcacattagtaacactcacgaccctagtttg
agaggctgaagtatgctcatgtcattgtggacactttcagaacaattacc
cttatgtacattgatgcaaaatactcaataaaatactcaaatactgaatc
cagaaaacatcactaagaatctatccaaaatgatgaagattgttttctca
tccaatatatcttgaagagtttccattccctctactcttctcagttcctg
tccacttttcatttgttctggatcaaaccccttttatgtctctcaatagg
aaaacaaacaaacaaacaaacaatgaaacaaaaaaaatccatagactcac
taattgacaaatctgcccccaaaaagccaaggtaaaagttatatttcaaa
agaactggtgcaggcattagtatttgtacattagaaattctagtctcaaa
tttctggtatatatttggacaattttgtgtgaagcattttgctgggtgtt
gataaagtatatgataaagtatattttctatgggtcgttataagttaaga
tatcaaaaagctaaaatttcaaaggggtaagaaattttttggctcagctc
tgagttcattagtcagaatgaaagactatgattgatgtttactggttaga
tgacataaatgtgggtgtctctgcaaacactagttctgggtagagtaaca
atccatgagacaaaaaagaaatctagttctataccgctctgtattatttc
ggcacttattgtgggtgtgttgtgggttatagccaatgaaattcctac
gaattctctgatgcatagtaagattgaatttgtttttaaaacatttgtca
cattcactacatttgcaaattttctcttctgtatgaattccctgatgaat
actaagatggatctgatgggtaaagcatttgtcacttttactacttttgt
aaggtttctttccatgataaattctctgctgactttgtaggttttctctc
tgggtaagatatttgtgaaattcactacatttgtaagggttccccgcaat
attgtcttttttcaccatgactttatgtttagaaacaaaaatcttgtcta
attctgcatttcggttgtgttttttcttctgcatgttaattccttgattg
agactaatggtagaaaacaaacttaaactgtttacagagtcattgtattt
gcaaacttctttagtgttcctgggcttaagtcttttttggttcgagaatt
gaagagcatcagagctgtgattagttttgtaaggtgtacactggagggat
tcaagaatgacattgctaagcttgtcccatttagaagacttctcttgaat
attcatgtgttcatggacaatgtactggctgtcttgatccaataccttcc
cattctttccatgtatgcaatgattttctgaaaaaaaaagggggggcaat
tagaggtgacatgaattacttatataaggagtaagggactcaataatcag
tgagcttatggattcgtactctcaagaaaggtctctctctctctctctct
ctctctctctctctctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146339774_146340871
seq2: B6Ng01-214F15.b_43_1140

seq1  GAATTCTTTTCTTTTTGTAGACTCTAGAGACCAGGTTTTTTTCCATATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCTTTTTGTAGACTCTAGAGACCAGGTTTTTTTCCATATTG  50

seq1  TGTCGCAGTCTAATCTTGTAGGACATTTGTCTGAGGGAAATGCAAAGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCGCAGTCTAATCTTGTAGGACATTTGTCTGAGGGAAATGCAAAGGCA  100

seq1  GATACAGATTAACACATTCTCTTTTCCTTGGGAATGTCGGCATAAAGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAGATTAACACATTCTCTTTTCCTTGGGAATGTCGGCATAAAGGAA  150

seq1  GCACAAATGTTTTATGTAAACTTCCATTAATATGCAGCATTGATAAAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAAATGTTTTATGTAAACTTCCATTAATATGCAGCATTGATAAAATG  200

seq1  AGTTTCAATAACAACAACAATAAACAGATTCCTTAACAGAGGTGGAATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCAATAACAACAACAATAAACAGATTCCTTAACAGAGGTGGAATGC  250

seq1  TCCTCATGTGCAAAATTTAATATTTGTAACCCTTGTGACTCACGCAGTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCATGTGCAAAATTTAATATTTGTAACCCTTGTGACTCACGCAGTAC  300

seq1  TGTTGCAAAATCATGTTTTGCACATTAGTAACACTCACGACCCTAGTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCAAAATCATGTTTTGCACATTAGTAACACTCACGACCCTAGTTTG  350

seq1  AGAGGCTGAAGTATGCTCATGTCATTGTGGACACTTTCAGAACAATTACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCTGAAGTATGCTCATGTCATTGTGGACACTTTCAGAACAATTACC  400

seq1  CTTATGTACATTGATGCAAAATACTCAATAAAATACTCAAATACTGAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGTACATTGATGCAAAATACTCAATAAAATACTCAAATACTGAATC  450

seq1  CAGAAAACATCACTAAGAATCTATCCAAAATGATGAAGATTGTTTTCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAACATCACTAAGAATCTATCCAAAATGATGAAGATTGTTTTCTCA  500

seq1  TCCAATATATCTTGAAGAGTTTCCATTCCCTCTACTCTTCTCAGTTCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATATATCTTGAAGAGTTTCCATTCCCTCTACTCTTCTCAGTTCCTG  550

seq1  TCCACTTTTCATTTGTTCTGGATCAAACCCCTTTTATGTCTCTCAATAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTTTTCATTTGTTCTGGATCAAACCCCTTTTATGTCTCTCAATAGG  600

seq1  AAAACAAACAAACAAACAAACAATGAAACAAAAAAAATCCATAGACTCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAACAAACAAACAAACAATGAAACAAAAAAAATCCATAGACTCAC  650

seq1  TAATTGACAAATCTGCCCCCAAAAAGCCAAGGTAAAAGTTATATTTCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGACAAATCTGCCCCCAAAAAGCCAAGGTAAAAGTTATATTTCAAA  700

seq1  AGAACTGGTGCAGGCATTAGTATTTGTACATTAGAAATTCTAGTCTCAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGGTGCAGGCATTAGTATTTGTACATTAGAAATTCTAGTCTCAAA  750

seq1  TTTCTGGTATATATTTGGACAATTTTGTGTGAAGCATTTTGCTGGGTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGTATATATTTGGACAATTTTGTGTGAAGCATTTTGCTGGGTGTT  800

seq1  GATAAAGTATATGATAAAGTATATTTTCTATGGGTCGTTATAAGTTAAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAGTATATGATAAAGTATATTTTCTATGGGTCGTTATAAGTTAAGA  850

seq1  TATCAAAAAGCTAAAATTTCAAAGGGGTAAGAAATTTTTTGGCTCAGCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAAAAGCTAAAATTTCAAAGGGGTAAGAAATTTTTTGGCTCAGCTC  900

seq1  TGAGTTCATTAGTCAGAATGAAAGACTATGATTGATGTTTACTGGTTAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCATTAGTCAGAATGAAAGACTATGATTGATGTTTACTGGTTAGA  950

seq1  TGACATAAATGTGGGTGTCTCTGCAAACACTAGTTCT-GGTAGAGTAACA  999
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TGACATAAATGTGGGTGTCTCTGCAAACACTAGTTCTGGGTAGAGTAACA  1000

seq1  ATCCATGAGACAAAAAAGAAATCTAGTTCTATACCGCTCTGTAATTATTT  1049
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATCCATGAGACAAAAAAGAAATCTAGTTCTATACCGCTCTGT-ATTATTT  1049

seq1  CCGCACTGGTTGTGGGTGTGTTGTGGGTTATAGCCAATGAAATTCCTAC  1098
      | |||||  ||||||||||||||||||||||||||||||||||||||||
seq2  CGGCACTTATTGTGGGTGTGTTGTGGGTTATAGCCAATGAAATTCCTAC  1098

seq1: chr4_146362894_146363662
seq2: B6Ng01-214F15.g_64_832 (reverse)

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACCTTTCTTGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACCTTTCTTGAGA  50

seq1  GTACGAATCCATAAGCTCACTGATTATTGAGTCCCTTACTCCTTATATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACGAATCCATAAGCTCACTGATTATTGAGTCCCTTACTCCTTATATAA  100

seq1  GTAATTCATGTCACCTCTAATTGCCCCCCCTTTTTTTTTCAGAAAATCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTCATGTCACCTCTAATTGCCCCCCCTTTTTTTTTCAGAAAATCAT  150

seq1  TGCATACATGGAAAGAATGGGAAGGTATTGGATCAAGACAGCCAGTACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATACATGGAAAGAATGGGAAGGTATTGGATCAAGACAGCCAGTACAT  200

seq1  TGTCCATGAACACATGAATATTCAAGAGAAGTCTTCTAAATGGGACAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCATGAACACATGAATATTCAAGAGAAGTCTTCTAAATGGGACAAGC  250

seq1  TTAGCAATGTCATTCTTGAATCCCTCCAGTGTACACCTTACAAAACTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAATGTCATTCTTGAATCCCTCCAGTGTACACCTTACAAAACTAAT  300

seq1  CACAGCTCTGATGCTCTTCAATTCTCGAACCAAAAAAGACTTAAGCCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCTCTGATGCTCTTCAATTCTCGAACCAAAAAAGACTTAAGCCCAG  350

seq1  GAACACTAAAGAAGTTTGCAAATACAATGACTCTGTAAACAGTTTAAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACTAAAGAAGTTTGCAAATACAATGACTCTGTAAACAGTTTAAGTT  400

seq1  TGTTTTCTACCATTAGTCTCAATCAAGGAATTAACATGCAGAAGAAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCTACCATTAGTCTCAATCAAGGAATTAACATGCAGAAGAAAAAA  450

seq1  CACAACCGAAATGCAGAATTAGACAAGATTTTTGTTTCTAAACATAAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACCGAAATGCAGAATTAGACAAGATTTTTGTTTCTAAACATAAAGT  500

seq1  CATGGTGAAAAAAGACAATATTGCGGGGAACCCTTACAAATGTAGTGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTGAAAAAAGACAATATTGCGGGGAACCCTTACAAATGTAGTGAAT  550

seq1  TTCACAAATATCTTACCCAGAGAGAAAACCTACAAAGTCAGCAGAGAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAAATATCTTACCCAGAGAGAAAACCTACAAAGTCAGCAGAGAATT  600

seq1  TATCATGGAAAGAAACCTTACAAAAGTAGTAAAAGTGACAAATGCTTTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATGGAAAGAAACCTTACAAAAGTAGTAAAAGTGACAAATGCTTTAC  650

seq1  CCATCAGATCCATCTTAGTATTCATCAGGGAATTCATACAGAAGAGAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAGATCCATCTTAGTATTCATCAGGGAATTCATACAGAAGAGAAAA  700

seq1  TTTGCAAATGTAGTGAATGTGACAAATGTTTTAAAAACAAATTCAATCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAAATGTAGTGAATGTGACAAATGTTTTAAAAACAAATTCAATCTT  750

seq1  ACTATGCATCAGAGAATTC  769
      |||||||||||||||||||
seq2  ACTATGCATCAGAGAATTC  769