MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-214K11
Chromosome	4 (Build37)
Map Location	99,798,875 - 99,927,522
singlet/doublet	doublet
Overlap gene	Ror1
Upstream gene	LOC665193, Atg4c, LOC665212, LOC638890, LOC100042589, Foxd3, Alg6, Itgb3bp, BC020077, Pgm2
Downstream gene	Ube2u, LOC277707, LOC621573, Cachd1, LOC100039747, Raver2, Jak1
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC665193 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665193
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs

name	Atg4c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242557 MGI:2651854
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665212 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665212
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 19 Proteins pseudo : _no_value

name	LOC638890 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:638890
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC100042589 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042589
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Foxd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15221 MGI:1347473
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Alg6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320438 MGI:2444031
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Itgb3bp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67733 MGI:1914983
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC020077 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230500 MGI:2385199
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pgm2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72157 MGI:97565
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ror1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26563 MGI:1347520
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ube2u (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381534 MGI:3588216
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC277707 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:277707
definition	note : C3orf6 pseudogene pseudo : _no_value

name	LOC621573 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:621573
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Cachd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320508 MGI:2444177
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039747 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039747
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	Raver2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242570 MGI:2443623
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Jak1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16451 MGI:96628
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665193 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94372140 GeneID:665193
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs product : hypothetical LOC665193 transcript_id : XM_975196.1

name	Atg4c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254278 GeneID:242557 MGI:2651854
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : autophagy-related 4C (yeast) transcript_id : NM_175029.2

name	LOC638890 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252787 GeneID:638890
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to retinitis pigmentosa GTPase regulator interacting protein 1 transcript_id : XM_923553.3

name	LOC100042589 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252798 GeneID:100042589
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042589 transcript_id : XM_001479187.1

name	Foxd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112807214 GeneID:15221 MGI:1347473
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : forkhead box D3 transcript_id : NM_010425.3

name	Alg6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486912 GeneID:320438 MGI:2444031
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : asparagine-linked glycosylation 6 homolog (yeast, alpha-1,3,-glucosyltransferase) transcript_id : NM_001081264.1

name	Itgb3bp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142343818 GeneID:67733 MGI:1914983
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : integrin beta 3 binding protein (beta3-endonexin) transcript_id : NM_026348.3

name	BC020077 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21704081 GeneID:230500 MGI:2385199
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC020077 transcript_id : NM_145549.1

name	Pgm2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31980725 GeneID:72157 MGI:97565
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphoglucomutase 2 transcript_id : NM_028132.2

name	Ror1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142378635 GeneID:26563 MGI:1347520
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : receptor tyrosine kinase-like orphan receptor 1 transcript_id : NM_013845.3

name	Ube2u (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142357299 GeneID:381534 MGI:3588216
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin-conjugating enzyme E2U (putative) transcript_id : NM_001033773.2

name	Cachd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:39930562 GeneID:320508 MGI:2444177
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cache domain containing 1 transcript_id : NM_198037.1

name	LOC100039747 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252814 GeneID:100039747
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : hypothetical protein LOC100039747 transcript_id : XM_001473427.1

name	Raver2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33942105 GeneID:242570 MGI:2443623
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribonucleoprotein, PTB-binding 2 transcript_id : NM_183024.1

name	Jak1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111607495 GeneID:16451 MGI:96628
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Janus kinase 1 transcript_id : NM_146145.2

name	LOC665193 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94372141 GeneID:665193
definition	codon_start : 1 product : hypothetical protein protein_id : XP_980290.1

name	Atg4c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254279 CCDS:CCDS18382.1 GeneID:242557 MGI:2651854
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005829 - cytosol [Evidence ISS]; GO:0005875 - microtubule associated complex [Evidence ISS] GO_function : GO:0004197 - cysteine-type endopeptidase activity [Evidence ISS]; GO:0008234 - cysteine-type peptidase activity [Evidence ISS]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008017 - microtubule binding [Evidence ISS]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0000045 - autophagic vacuole formation [Evidence ISS]; GO:0006914 - autophagy [Evidence ISS]; GO:0006612 - protein targeting to membrane [Evidence ISS]; GO:0006623 - protein targeting to vacuole [Evidence ISS]; GO:0015031 - protein transport [Evidence IEA]; GO:0006508 - proteolysis [Evidence ISS]; GO:0006810 - transport [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 exception : mismatches in translation note : cysteine protease involved in autophagy; autophagin 3; autophagy-related 4C-like; AUT-like 1, cysteine endopeptidase; APG4 (ATG4) autophagy-related homolog C product : APG4 autophagy 4 homolog C protein_id : NP_778194.2

name	LOC638890 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252788 GeneID:638890
definition	codon_start : 1 product : hypothetical protein protein_id : XP_928646.3

name	LOC100042589 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252799 GeneID:100042589
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479237.1

name	Foxd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112807215 CCDS:CCDS18383.1 GeneID:15221 MGI:1347473
definition	GO_component : GO:0005634 - nucleus [Evidence IC] [Evidence IEA] [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence TAS] [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IDA] [Evidence TAS] [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0001701 - embryonic development (sensu Mammalia) [Evidence IDA]; GO:0001892 - embryonic placenta development [Evidence IMP]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence TAS]; GO:0001829 - trophectodermal cell differentiation [Evidence IMP] codon_start : 1 note : HNF-3/forkhead homolog 2 product : forkhead box D3 protein_id : NP_034555.3

name	Alg6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486913 GeneID:320438 MGI:2444031
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0046527 - glucosyltransferase activity [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006487 - protein amino acid N-linked glycosylation [Evidence ISS] codon_start : 1 product : asparagine-linked glycosylation 6 homolog (yeast, alpha-1,3,-glucosyltransferase) protein_id : NP_001074733.1

name	Itgb3bp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385850 CCDS:CCDS18387.1 GeneID:67733 MGI:1914983
definition	codon_start : 1 note : beta3-endonexin product : integrin beta 3 binding protein protein_id : NP_080624.1

name	BC020077 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704082 GeneID:230500 MGI:2385199
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : hypothetical protein LOC230500 protein_id : NP_663524.1

name	Pgm2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980726 CCDS:CCDS18388.1 GeneID:72157 MGI:97565
definition	GO_function : GO:0004614 - phosphoglucomutase activity [Evidence IDA] codon_start : 1 exception : mismatches in translation note : phosphoglucomutase 1 product : phosphoglucomutase 2 protein_id : NP_082408.2

name	Ror1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560493 CCDS:CCDS18389.1 GeneID:26563 MGI:1347520
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0004714 - transmembrane receptor protein tyrosine kinase activity [Evidence TAS] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : neurotrophic tyrosine kinase, receptor related 1 product : receptor tyrosine kinase-like orphan receptor 1 protein_id : NP_038873.2

name	Ube2u (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702123 CCDS:CCDS18390.1 GeneID:381534 MGI:3588216
definition	codon_start : 1 product : ubiquitin-conjugating enzyme E2U (putative) protein_id : NP_001028945.1

name	Cachd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39930563 CCDS:CCDS18391.1 GeneID:320508 MGI:2444177
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : von Willebrand factor type A and cache domain containing 1 protein_id : NP_932154.1

name	LOC100039747 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252815 GeneID:100039747
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473477.1

name	Raver2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33942106 CCDS:CCDS18392.1 GeneID:242570 MGI:2443623
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 note : novel protein containing an RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) product : raver2 protein_id : NP_898845.1

name	Jak1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111607496 CCDS:CCDS18393.1 GeneID:16451 MGI:96628
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004718 - Janus kinase activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0018108 - peptidyl-tyrosine phosphorylation [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : Janus kinase 1 protein_id : NP_666257.2

name	LOC621573 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:621573
definition	number : 1 pseudo : _no_value

name	LOC621573 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:621573
definition	number : 2 pseudo : _no_value

name	LOC665212 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252786 GeneID:665212
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 19 Proteins product : similar to glyceraldehyde-3-phosphate dehydrogenase pseudo : _no_value transcript_id : XR_031097.1

clone name	MSMg01-266C22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-538P14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-531E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524L03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-514C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261F06
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-214K11.b	B6Ng01-214K11.g
ACC	GA031847	GA031848
length	1,100	1,079
definition	B6Ng01-214K11.b	B6Ng01-214K11.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(99,798,875 - 99,799,966)	(99,926,438 - 99,927,522)
sequence	gaattcctgccctgacttctctcagggatagactgtttcctggaatgtga gtgaaatacaccttttcccccaggagatgtttttagtcgtagtgttttat catagcaacaataaccctaaggccaggtgagttttaaggacgtggagaat tttcatttgcttggcaatatcgtttgtggtagaaaaatgcaagtaaaggc cgatttccctccctcccatgccagctggtaatgacaggaggcctacggag tgtgcttgagtgggaagggaacatatacttccctacctggtgttttgtgt gctgctttaaaaagctgattcagcagcaactaaattgtttagagaacatt tcagctctggtgttctgggcagcagctgggaaactgcctggagcaggcct ggggcagaaacactcacctagaggaatttggcctggagtcccagatggac ctaggcaccctgtgtacctctgggcaacaggaccggaaagcaagtcccgc acctacttcagaccaatgtgacaacttcagacaggttctccgcctttttc tcctactctgttgattggttgcctgtgttgtcagccctttgggctactga gggattgggtccgacctttccccggcctctcatgacttctgccttttgct ggaatgtgccccctgggctaggagtgtggaccccttcgcccagttcctgt ccctgcatgcccttcccctctcagaacttaattcgttctttcctacggct ttgatcttctttggacaaaagccccaagctctgggatatcattactggcc tctttgcgctccagtgctctctgattcacagttggtttttttggctaatt tgagaccacctggtcctcggaaagccagcgttcttccaggttgctctgtg ggagaaacatgctttgctcacattttaatcatgttggtgagtctcctgat ggcagaggcttcttggattgtgagaacggcagaggcagaagggttaccag ttatttatgctaatctgtgggcatttaatatctttcaaatattatgtatt tttgggggataagccaattttgccggtttttttgagggggatgtatgtca	gaattccatagacgcccctacaaaggcagatgtagggcactgagtgtgcc ctttaccattctcccttcccatggctgggatgctggatagtacttggcag acattatggtaacccgaagagtgaaaactacactggatgcagatgaagca gaaaggcaagaacatcccccaaatctcacagataccccagagtcccacac tgatccctgcatcccaacctttcctatgtaaaagaacaaaacgttaaatt gtgggagctactatatttgggtttataagaaatatttactctgtctgaaa atatgtttctttcccttgggactcagggtaagagaagaaaaaaaatatat gtcctgggaaatgtgagcttctcctgctattattgctgttccttcttcta aaactataaactctgggatctgttgtcaaaacaggaagacttgcaggtat gagagagggccagacagcagcagtggcattcatgagaaagttcttaactg gcatacggctgcttgatggcatgttcagtgatgagcaaagggatttgcac agatgaggaaacaaaacatgggcgggaatatgggatattccctgctatac ttgcataaccataagtagtctagtctatgtcaatcaatgagaaaatgagc aaagaaaactcaatacgtgctaccacagaattccttccagccatgaaaag gctcagggtactctggaaagctttgtgacagaaggcccgtcagagcaaat cacaaaaccctggagtctagcaagagtgatgacctaatgaatagtgagcc tgacagacttgtgtggtgggtatatcgtgaagacatgcatctgtgtgctg tcaaattcctgccaggcagtctttgacctttagaccctcagggggactag agcagaataggatgtaaggatgggtaaggatcctcactcacccttctgtg ccttgagaaaatgtgagcgggaggatggagacttgctggcaatcatgggt ctgcctccccagacaggctgatattctcaaactgagtgcaatgctaagaa gaagcagcgcgcgcttgcaaacgtgaata
quality values	Open. Hide. 52 28 35 41 58 62 62 47 49 62 62 62 62 49 37 42 62 62 62 62 62 62 47 39 62 62 49 43 39 62 59 59 59 49 49 46 59 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 59 62 62 59 59 59 59 62 62 62 62 62 59 59 59 62 62 62 62 62 59 62 62 62 62 62 59 62 62 59 40 54 56 43 59 62 62 62 59 62 59 62 62 62 62 62 54 49 49 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 59 62 59 62 62 54 59 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 59 54 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 54 47 47 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 54 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 56 62 56 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 47 47 62 62 62 62 62 62 62 62 62 58 50 58 58 58 58 42 54 41 53 54 58 54 54 48 54 54 58 54 54 54 42 36 54 58 58 23 58 58 42 35 58 58 58 54 54 52 58 42 58 34 54 54 54 54 47 54 54 54 41 58 54 58 52 54 58 52 50 54 58 36 38 52 39 52 54 54 48 58 54 58 58 54 52 52 58 58 51 58 47 54 58 50 51 51 48 50 50 49 47 43 47 54 50 51 50 35 58 42 30 48 58 30 58 42 37 30 47 43 23 38 52 39 40 42 39 48 47 50 58 49 50 50 37 58 41 54 51 54 47 49 50 39 42 50 26 43 49 58 39 33 49 51 53 39 36 36 50 45 32 58 50 39 51 39 46 44 41 41 50 28 32 39 42 43 50 33 36 58 29 39 39 41 44 37 51 58 49 37 49 31 53 32 39 38 39 52 39 40 36 49 31 52 21 21 17 5 14 23 51 49 26 25 32 37 39 45 34 41 54 40 39 33 45 31 40 39 37 33 35 39 36 54 22 37 32 33 37 38 54 53 37 47 37 53 42 26 37 46 14 12 37 32 37 37 33 39 32 37 22 16 47 33 32 34 41 40 35 33 30 16 17 47 40 40 40 40 40 40 33 33 33 13 47 45 48 32 31 35 29 39 26 22 30 25 20 8 16 33 30 33 19 25 29 23 31 19 46 26 31 25 31 32 24 24 26 9 19 31 45 11 9 30 28 33 30 27 14 30 26 31 31 31 30 24 37 40 33 38 30 33 47 31 26 23 23 42 21 14 46 21 32 30 36 17 18 28 33 33 46 46 24 38 34 32 25 27 28 43 24 37 31 37 29 27 32 18 33 23 8 14 37 15 31 31 35 31 31 18 31 13 25 11 14 9 28 27 32 24 23 21 25 9 6 8 11 21 35 31 18 32 12 9 9 30 28 29 7 41 12 22 13 11 11 24 25 9 44 18 27 27 19 20 36 20 18 14 9 33 11 37 13 10 5 17 34 32 14 12 14 33 32 34 24 32 43 33 7 12 32 37 5 4 5 11 5 15 17 9 31 7 10 17 48 25 8 7 25 8 21 17 10 5 7 14 43 34 36 9 23 30 33 27 21 11 12 10 32 11 20 19 26 10 28 34 34 6 7 10 23 8 6 21 15 26 29 21 22 3 6 12 6 33 27 28 7 6 3 4 6 13 5 6 7 4 4	Open. Hide. 62 47 51 47 62 62 59 43 62 62 62 59 59 56 59 56 43 33 54 50 59 49 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 54 62 62 62 54 62 59 62 62 62 62 54 54 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 62 62 54 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 54 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 54 62 62 62 62 54 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 56 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 54 54 62 56 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 54 62 52 62 52 62 62 62 62 62 62 54 54 62 62 52 48 62 62 62 62 62 54 62 52 62 62 54 62 62 62 62 62 62 58 58 58 58 42 42 58 58 58 54 48 54 52 54 54 58 58 58 47 58 54 54 54 54 42 52 52 43 52 48 54 58 54 45 54 54 58 58 58 54 54 52 54 58 58 58 42 27 49 54 54 52 58 58 54 58 58 46 52 54 54 54 58 54 58 54 54 54 46 58 54 58 50 54 58 54 52 52 58 58 47 58 46 45 52 48 54 54 54 54 58 50 50 58 50 58 53 58 51 48 49 47 42 58 58 58 23 24 58 58 50 51 45 58 58 46 58 58 58 51 50 51 52 49 50 49 50 51 49 53 58 51 49 46 50 53 39 49 40 46 58 46 53 53 46 48 50 51 32 42 25 40 47 48 24 50 46 40 58 58 43 28 58 29 49 37 27 16 58 44 43 46 41 53 40 41 41 33 50 52 40 31 27 33 50 39 50 39 42 39 25 27 15 41 50 31 47 21 50 44 40 39 39 39 23 51 11 43 39 50 29 34 32 32 37 31 50 50 47 35 34 34 37 41 32 39 28 37 32 40 45 32 39 24 37 49 41 21 39 39 32 28 32 33 9 40 37 31 33 35 37 37 31 24 32 32 32 35 32 31 37 27 27 47 37 18 26 32 39 16 47 45 40 37 41 29 18 28 17 33 35 27 26 30 31 25 37 29 37 27 36 23 37 27 31 18 18 31 31 29 21 32 28 32 41 30 45 31 32 24 30 32 27 29 31 52 33 37 32 21 37 28 31 11 17 18 27 35 18 31 27 8 17 26 51 51 31 31 12 27 29 46 32 30 15 31 14 16 23 33 32 9 17 46 46 47 23 31 16 24 30 25 26 19 32 24 8 30 29 31 27 25 10 30 17 33 16 31 18 25 19 21 14 30 46 30 23 27 32 19 21 18 25 34 22 30 31 20 23 25 14 10 27 31 12 10 23 31 25 31 18 23 26 23 8 12 12 30 18 39 46 46 6 8 26 18 21 28 11 24 9 20 11 38 30 32 32 11 39 48 30 6 22 10 25 22 20 23 26 24 13 14 25 8 11 18 28 18 26 19 17 24 27 24 31 28 10 25 27 31 27 20 15 14 32 12 39 19 20 20 32 21 34 11 13 10 17 10 11 19 34 48 32 10 21 21 30 6 10 27 22 10 13 19 31 22 32 31 22 17 34 19 7 33 29 11 19 13 6 9 3 3 5 6 7 8 7 11 17 11 7 7 7 12 5 15 10 20 6 7 26

Alignment Information

BAC End 1

BAC End 2

seq1: chr4_99798875_99799966
seq2: B6Ng01-214K11.b_49_1148

seq1  GAATTCCTGCCCTGACTTCTCTCAGGGATAGACTGTTTCCTGGAATGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCCCTGACTTCTCTCAGGGATAGACTGTTTCCTGGAATGTGA  50

seq1  GTGAAATACACCTTTTCCCCCAGGAGATGTTTTTAGTCGTAGTGTTTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAATACACCTTTTCCCCCAGGAGATGTTTTTAGTCGTAGTGTTTTAT  100

seq1  CATAGCAACAATAACCCTAAGGCCAGGTGAGTTTTAAGGACGTGGAGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCAACAATAACCCTAAGGCCAGGTGAGTTTTAAGGACGTGGAGAAT  150

seq1  TTTCATTTGCTTGGCAATATCGTTTGTGGTAGAAAAATGCAAGTAAAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTTGCTTGGCAATATCGTTTGTGGTAGAAAAATGCAAGTAAAGGC  200

seq1  CGATTTCCCTCCCTCCCATGCCAGCTGGTAATGACAGGAGGCCTACGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATTTCCCTCCCTCCCATGCCAGCTGGTAATGACAGGAGGCCTACGGAG  250

seq1  TGTGCTTGAGTGGGAAGGGAACATATACTTCCCTACCTGGTGTTTTGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTTGAGTGGGAAGGGAACATATACTTCCCTACCTGGTGTTTTGTGT  300

seq1  GCTGCTTTAAAAAGCTGATTCAGCAGCAACTAAATTGTTTAGAGAACATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTTTAAAAAGCTGATTCAGCAGCAACTAAATTGTTTAGAGAACATT  350

seq1  TCAGCTCTGGTGTTCTGGGCAGCAGCTGGGAAACTGCCTGGAGCAGGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTCTGGTGTTCTGGGCAGCAGCTGGGAAACTGCCTGGAGCAGGCCT  400

seq1  GGGGCAGAAACACTCACCTAGAGGAATTTGGCCTGGAGTCCCAGATGGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCAGAAACACTCACCTAGAGGAATTTGGCCTGGAGTCCCAGATGGAC  450

seq1  CTAGGCACCCTGTGTACCTCTGGGCAACAGGACCGGAAAGCAAGTCCCGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCACCCTGTGTACCTCTGGGCAACAGGACCGGAAAGCAAGTCCCGC  500

seq1  ACCTACTTCAGACCAATGTGACAACTTCAGACAGGTTCTCCGCCTTTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACTTCAGACCAATGTGACAACTTCAGACAGGTTCTCCGCCTTTTTC  550

seq1  TCCTACTCTGTTGATTGGTTGCCTGTGTTGTCAGCCCTTTGGGCTACTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACTCTGTTGATTGGTTGCCTGTGTTGTCAGCCCTTTGGGCTACTGA  600

seq1  GGGATTGGGTCCGACCTTTCCCCGGCCTCTCATGACTTCTGCCTTTTGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTGGGTCCGACCTTTCCCCGGCCTCTCATGACTTCTGCCTTTTGCT  650

seq1  GGAATGTGCCCCCTGGGCTAGGAGTGTGGACCCCTTCGCCCAGTTCCTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGTGCCCCCTGGGCTAGGAGTGTGGACCCCTTCGCCCAGTTCCTGT  700

seq1  CCCTGCATGCCCTTCCCCTCTCAGAACTTAATTCGTTCTTTCCTACGGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCATGCCCTTCCCCTCTCAGAACTTAATTCGTTCTTTCCTACGGCT  750

seq1  TTGATCTTCTTTGGACAAAAGCCCCAAGCTCTGGGATATCATTACTGGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCTTCTTTGGACAAAAGCCCCAAGCTCTGGGATATCATTACTGGCC  800

seq1  TCTTTGCGCTCCAAGTGCTCTCTGATTCACAGTTGGTTTTTTTGGCTAAT  850
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCGCTCC-AGTGCTCTCTGATTCACAGTTGGTTTTTTTGGCTAAT  849

seq1  TTGAGACCACCTGGTCCTCGG-AAGCCAGCGTTCTTCCAGGTTGCTCTGT  899
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTGAGACCACCTGGTCCTCGGAAAGCCAGCGTTCTTCCAGGTTGCTCTGT  899

seq1  GGGAGAAACATGCTTTGCTCACATTTTAATCATGTTGGTGAGTCTCCTGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAAACATGCTTTGCTCACATTTTAATCATGTTGGTGAGTCTCCTGA  949

seq1  TGGCAGAGGCTTCTTGGATGTGGAGAACGGCAGAGGCAGAA-GGTTACCA  998
      |||||||||||||||||||   ||||||||||||||||||| ||||||||
seq2  TGGCAGAGGCTTCTTGGATTGTGAGAACGGCAGAGGCAGAAGGGTTACCA  999

seq1  G-TAATTATGCTAATCTGTGGGCATT--ATATC-TTCAAATATTATGTA-  1043
      | || |||||||||||||||||||||  ||||| ||||||||||||||| 
seq2  GTTATTTATGCTAATCTGTGGGCATTTAATATCTTTCAAATATTATGTAT  1049

seq1  TTTTGGGGGATAAG-CAATTTTGCCGTTTTTTTTGA-GGGGATGTATGTC  1091
      |||||||||||||| ||||||||||| ||||||||| |||||||||||||
seq2  TTTTGGGGGATAAGCCAATTTTGCCGGTTTTTTTGAGGGGGATGTATGTC  1099

seq1  A  1092
      |
seq2  A  1100

seq1: chr4_99926438_99927522
seq2: B6Ng01-214K11.g_64_1142 (reverse)

seq1  TATTCACG-TTGCAAGCGCGCGCTGCTTTCTTCTTAGCATTTGCACTTCA  49
      |||||||| ||||||||||||||||| |||||||||||| |||||| |||
seq2  TATTCACGTTTGCAAGCGCGCGCTGC-TTCTTCTTAGCA-TTGCAC-TCA  47

seq1  GTTTTGAGAATATCAGCCTTGTCTGGGGAGGCAGACCCATGA-TGCCAGC  98
      | |||||||||||||||| ||||||||||||||||||||||| |||||||
seq2  G-TTTGAGAATATCAGCC-TGTCTGGGGAGGCAGACCCATGATTGCCAGC  95

seq1  AAGTCTCCCATCCTCCCGCTCACATTTTCTCAAAGGCACAGAAGGGTGAG  148
      |||||| |||||||||||||||||||||||| ||||||||||||||||||
seq2  AAGTCT-CCATCCTCCCGCTCACATTTTCTC-AAGGCACAGAAGGGTGAG  143

seq1  TGAGGATCCTTACCCATCCTTACATCCTATTCTGCTCTAGTCCCCCCTGA  198
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGAGGATCCTTACCCATCCTTACATCCTATTCTGCTCTAGT-CCCCCTGA  192

seq1  GGGTCTAAAGGTCAAAGGCTGCCTGGCAGGAATTTGACAGCACACAGATG  248
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GGGTCTAAAGGTCAAAGACTGCCTGGCAGGAATTTGACAGCACACAGATG  242

seq1  CATGTCTTCACGATATACCCACCACACAAGTCTGTCAGGCTCACTATTCA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCTTCACGATATACCCACCACACAAGTCTGTCAGGCTCACTATTCA  292

seq1  TTAGGTCATCACTCTTGCTAGACTCCAGGGTTTTGTGATTTGCTCTGACG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTCATCACTCTTGCTAGACTCCAGGGTTTTGTGATTTGCTCTGACG  342

seq1  GGCCTTCTGTCACAAAGCTTTCCAGAGTACCCTGAGCCTTTTCATGGCTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTCTGTCACAAAGCTTTCCAGAGTACCCTGAGCCTTTTCATGGCTG  392

seq1  GAAGGAATTCTGTGGTAGCACGTATTGAGTTTTCTTTGCTCATTTTCTCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAATTCTGTGGTAGCACGTATTGAGTTTTCTTTGCTCATTTTCTCA  442

seq1  TTGATTGACATAGACTAGACTACTTATGGTTATGCAAGTATAGCAGGGAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTGACATAGACTAGACTACTTATGGTTATGCAAGTATAGCAGGGAA  492

seq1  TATCCCATATTCCCGCCCATGTTTTGTTTCCTCATCTGTGCAAATCCCTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCATATTCCCGCCCATGTTTTGTTTCCTCATCTGTGCAAATCCCTT  542

seq1  TGCTCATCACTGAACATGCCATCAAGCAGCCGTATGCCAGTTAAGAACTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCATCACTGAACATGCCATCAAGCAGCCGTATGCCAGTTAAGAACTT  592

seq1  TCTCATGAATGCCACTGCTGCTGTCTGGCCCTCTCTCATACCTGCAAGTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATGAATGCCACTGCTGCTGTCTGGCCCTCTCTCATACCTGCAAGTC  642

seq1  TTCCTGTTTTGACAACAGATCCCAGAGTTTATAGTTTTAGAAGAAGGAAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTTTTGACAACAGATCCCAGAGTTTATAGTTTTAGAAGAAGGAAC  692

seq1  AGCAATAATAGCAGGAGAAGCTCACATTTCCCAGGACATATATTTTTTTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATAATAGCAGGAGAAGCTCACATTTCCCAGGACATATATTTTTTTT  742

seq1  CTTCTCTTACCCTGAGTCCCAAGGGAAAGAAACATATTTTCAGACAGAGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTTACCCTGAGTCCCAAGGGAAAGAAACATATTTTCAGACAGAGT  792

seq1  AAATATTTCTTATAAACCCAAATATAGTAGCTCCCACAATTTAACGTTTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTCTTATAAACCCAAATATAGTAGCTCCCACAATTTAACGTTTT  842

seq1  GTTCTTTTACATAGGAAAGGTTGGGATGCAGGGATCAGTGTGGGACTCTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTTACATAGGAAAGGTTGGGATGCAGGGATCAGTGTGGGACTCTG  892

seq1  GGGTATCTGTGAGATTTGGGGGATGTTCTTGCCTTTCTGCTTCATCTGCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATCTGTGAGATTTGGGGGATGTTCTTGCCTTTCTGCTTCATCTGCA  942

seq1  TCCAGTGTAGTTTTCACTCTTCGGGTTACCATAATGTCTGCCAAGTACTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTGTAGTTTTCACTCTTCGGGTTACCATAATGTCTGCCAAGTACTA  992

seq1  TCCAGCATCCCAGCCATGGGAAGGGAGAATGGTAAAGGGCACACTCAGTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCATCCCAGCCATGGGAAGGGAGAATGGTAAAGGGCACACTCAGTG  1042

seq1  CCCTACATCTGCCTTTGTAGGGGCGTCTATGGAATTC  1085
      |||||||||||||||||||||||||||||||||||||
seq2  CCCTACATCTGCCTTTGTAGGGGCGTCTATGGAATTC  1079

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