BAC Information

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BAC

Clone NameB6Ng01-214L03
Chromosome4 (Build37)
Map Location 61,945,774 - 62,093,576
singlet/doubletdoublet
Overlap geneSlc31a2, Fkbp15, Slc31a1, Cdc26, Prpf4, Rnf183
Upstream geneLOC100039116, LOC667242, LOC100039150, LOC100039019, LOC100039177, LOC621093, LOC100039206, LOC621127, LOC100039228, LOC384021, LOC100039247, LOC667278, Mup5, LOC435785, LOC667295, LOC100039305, LOC546832, OTTMUSG00000007485, Mup3, LOC100039345, OTTMUSG00000000231, Zfp37
Downstream geneWdr31, Bspry, Hdhd3, Alad, Pole3, 4933430I17Rik, Rgs3, Zfp618, Ambp, Kif12, Col27a1, Orm1, Orm-ps, Orm3, Orm2, Akna, Whrn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214L03.bB6Ng01-214L03.g
ACCGA031879GA031880
length6321,137
definitionB6Ng01-214L03.b B6Ng01-214L03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,092,945 - 62,093,576)(61,945,774 - 61,946,929)
sequence
gaattcaggacctctgcttgctctggccctgctcactctggtcaacccca
aagttaacattttcaagtaataaaattaaagacaaaagctgtagcaataa
tctaaatggatggttttgcccacattgataaccactgttgacatttagtt
ctttctaggagagctagcacacactattaagcctagaacttgggaagcag
aggagagctgatcactgagtttgaggccagcctggtctacatagtcaggg
cttgagaccctacctcaagcaagcaagcaagcaagcaagcaagcaaacaa
acaaacaacaaaaaacatttggttttttatcatccgggagatatttttcc
acagtgcagtgtgttttttaaagtagatgatgttgtgattgttttgtcac
tgaatctttaatacctaataacattatatcctagacacactccataataa
gaaatgttctatcacatcattttaaagactacagaatatctttcttacat
ccatcttctgtaacaatacaaaccaccttccagagaactgtatgtgcatg
tctgtctctgaaggtgtttttcatgccactctcattatttcttctctctc
tctctctctctctctctctctctctctctctc
gaattctgtatctgagtccagttccttttcctgggagccagggaaagggc
agtcagtctttggtggattatgagtaaccagctgctcttgaatacaggat
taaaagctgtaaccataatatccacaaggaagctagaactaagtgtgaag
gtcatcagattggggcaaagccaacgaaaaccttcgaatgaatgaggcta
agttgctaatctttccatgggtaataagggggaaggggcatgcattggca
caagagcctactcatggctgctactgtgggaggcataaagcaataaaaag
tagccccaaatttccaactccctccattgcttttgggttccagaggcttc
aaaaggcctagcccattagccactgaggttagatagatttttaccctcct
gtgagtcctgcagatatgttttctctgaggctgtacaactccccttagct
ttggccaaactctgtgtgaccctgagcttaaccttttgcaggtggctctc
tcacagggtggaaatatttgctgttaatcatgacaatggcttccatttat
cacacaaggctccactgccaggtttaatgctgagaattcaacctgtgttt
tcatctaagtctttcaacacctatgtgacatagactctagtatatattta
tttttaaatctgatcaggaagctgagccttagatgtataaagctgtttat
ctgaggcctcatggctaatactccagaactcaggatttgagctgagatgt
ccgactccagtctcagtgtctcagctaacccttggtcagagttctttgag
gggaacatatgggcagattggttggcaaaggattgccaagtgtgtttaag
aacgtatatgaaagattcttgatgttagggaaagaattaatgttaaaagt
tgatatatattcctgataaaattaaatcagtgagatgaaagacatacaca
cacacacacaccaaaaaaaaaaaaaatataataaaaaaaaaaaagcatgg
aaatactacgagagaaaaagtttatcacttagtagaaaacaaatacagct
agtgcgtgtggagggagaatggaaaaagcactccgtaagccgaagcaccc
ttgggggtaatgaatcgatcccgactttggacttcgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_62092945_62093576
seq2: B6Ng01-214L03.b_51_682 (reverse)

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGAAATAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGAAATAATG  50

seq1  AGAGTGGCATGAAAAACACCTTCAGAGACAGACATGCACATACAGTTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGGCATGAAAAACACCTTCAGAGACAGACATGCACATACAGTTCTC  100

seq1  TGGAAGGTGGTTTGTATTGTTACAGAAGATGGATGTAAGAAAGATATTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGGTGGTTTGTATTGTTACAGAAGATGGATGTAAGAAAGATATTCT  150

seq1  GTAGTCTTTAAAATGATGTGATAGAACATTTCTTATTATGGAGTGTGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTCTTTAAAATGATGTGATAGAACATTTCTTATTATGGAGTGTGTCT  200

seq1  AGGATATAATGTTATTAGGTATTAAAGATTCAGTGACAAAACAATCACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATATAATGTTATTAGGTATTAAAGATTCAGTGACAAAACAATCACAA  250

seq1  CATCATCTACTTTAAAAAACACACTGCACTGTGGAAAAATATCTCCCGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATCTACTTTAAAAAACACACTGCACTGTGGAAAAATATCTCCCGGA  300

seq1  TGATAAAAAACCAAATGTTTTTTGTTGTTTGTTTGTTTGCTTGCTTGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAAAAACCAAATGTTTTTTGTTGTTTGTTTGTTTGCTTGCTTGCTT  350

seq1  GCTTGCTTGCTTGCTTGAGGTAGGGTCTCAAGCCCTGACTATGTAGACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCTTGCTTGCTTGAGGTAGGGTCTCAAGCCCTGACTATGTAGACCA  400

seq1  GGCTGGCCTCAAACTCAGTGATCAGCTCTCCTCTGCTTCCCAAGTTCTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGCCTCAAACTCAGTGATCAGCTCTCCTCTGCTTCCCAAGTTCTAG  450

seq1  GCTTAATAGTGTGTGCTAGCTCTCCTAGAAAGAACTAAATGTCAACAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAATAGTGTGTGCTAGCTCTCCTAGAAAGAACTAAATGTCAACAGTG  500

seq1  GTTATCAATGTGGGCAAAACCATCCATTTAGATTATTGCTACAGCTTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCAATGTGGGCAAAACCATCCATTTAGATTATTGCTACAGCTTTTG  550

seq1  TCTTTAATTTTATTACTTGAAAATGTTAACTTTGGGGTTGACCAGAGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAATTTTATTACTTGAAAATGTTAACTTTGGGGTTGACCAGAGTGA  600

seq1  GCAGGGCCAGAGCAAGCAGAGGTCCTGAATTC  632
      ||||||||||||||||||||||||||||||||
seq2  GCAGGGCCAGAGCAAGCAGAGGTCCTGAATTC  632

seq1: chr4_61945774_61946929
seq2: B6Ng01-214L03.g_66_1202

seq1  GAATTCTGTATCTGAGTCCAGTTCCTTTTCCTGGGAGCCAGGGAAAGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTATCTGAGTCCAGTTCCTTTTCCTGGGAGCCAGGGAAAGGGC  50

seq1  AGTCAGTCTTTGGTGGATTATGAGTAACCAGCTGCTCTTGAATACAGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGTCTTTGGTGGATTATGAGTAACCAGCTGCTCTTGAATACAGGAT  100

seq1  TAAAAGCTGTAACCATAATATCCACAAGGAAGCTAGAACTAAGTGTGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGCTGTAACCATAATATCCACAAGGAAGCTAGAACTAAGTGTGAAG  150

seq1  GTCATCAGATTGGGGCAAAGCCAACGAAAACCTTCGAATGAATGAGGCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCAGATTGGGGCAAAGCCAACGAAAACCTTCGAATGAATGAGGCTA  200

seq1  AGTTGCTAATCTTTCCATGGGTAATAAGGGGGAAGGGGCATGCATTGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCTAATCTTTCCATGGGTAATAAGGGGGAAGGGGCATGCATTGGCA  250

seq1  CAAGAGCCTACTCATGGCTGCTACTGTGGGAGGCATAAAGCAATAAAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGCCTACTCATGGCTGCTACTGTGGGAGGCATAAAGCAATAAAAAG  300

seq1  TAGCCCCAAATTTCCAACTCCCTCCATTGCTTTTGGGTTCCAGAGGCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCCAAATTTCCAACTCCCTCCATTGCTTTTGGGTTCCAGAGGCTTC  350

seq1  AAAAGGCCTAGCCCATTAGCCACTGAGGTTAGATAGATTTTTACCCTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGCCTAGCCCATTAGCCACTGAGGTTAGATAGATTTTTACCCTCCT  400

seq1  GTGAGTCCTGCAGATATGTTTTCTCTGAGGCTGTACAACTCCCCTTAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTCCTGCAGATATGTTTTCTCTGAGGCTGTACAACTCCCCTTAGCT  450

seq1  TTGGCCAAACTCTGTGTGACCCTGAGCTTAACCTTTTGCAGGTGGCTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCAAACTCTGTGTGACCCTGAGCTTAACCTTTTGCAGGTGGCTCTC  500

seq1  TCACAGGGTGGAAATATTTGCTGTTAATCATGACAATGGCTTCCATTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGGGTGGAAATATTTGCTGTTAATCATGACAATGGCTTCCATTTAT  550

seq1  CACACAAGGCTCCACTGCCAGGTTTAATGCTGAGAATTCAACCTGTGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAAGGCTCCACTGCCAGGTTTAATGCTGAGAATTCAACCTGTGTTT  600

seq1  TCATCTAAGTCTTTCAACACCTATGTGACATAGACTCTAGTATATATTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTAAGTCTTTCAACACCTATGTGACATAGACTCTAGTATATATTTA  650

seq1  TTTTTAAATCTGATCAGGAAGCTGAGCCTTAGATGTATAAAGCTGTTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAATCTGATCAGGAAGCTGAGCCTTAGATGTATAAAGCTGTTTAT  700

seq1  CTGAGGCCTCATGGCTAATACTCCAGAACTCAGGATTTGAGCTGAGATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGCCTCATGGCTAATACTCCAGAACTCAGGATTTGAGCTGAGATGT  750

seq1  CCGACTCCAGTCTCAGTGTCTCAGCTAACCCTTGGTCAGAGTTCTTTGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGACTCCAGTCTCAGTGTCTCAGCTAACCCTTGGTCAGAGTTCTTTGAG  800

seq1  GGGAACATATGGGCAGATTGGTTGGCAAAGGATTGCCAAGTGTGTTTAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACATATGGGCAGATTGGTTGGCAAAGGATTGCCAAGTGTGTTTAAG  850

seq1  AACGTATATGAAAGATTCTTGATGTTAGGGAAAGAATTAATGTTAAAAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AACGTATATGAAAGATTCTTGATGTTAGGGAAAGAATTAATGTTAAAAG-  899

seq1  TTGATATATATTCCTGATAAAATTAAATCAGTGAGATGAAAAGACAATAC  950
      |||||||||||||||||||||||||||||||||||||| |||||| ||||
seq2  TTGATATATATTCCTGATAAAATTAAATCAGTGAGATG-AAAGAC-ATAC  947

seq1  ACACACACACACACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA  1000
      |||||||||||||||     |||||||||||||| | || ||||||||||
seq2  ACACACACACACACC-----AAAAAAAAAAAAAATATAATAAAAAAAAAA  992

seq1  AAGCAATGGAAATACTAACGAGAGAAAAAGTTTATCAACCTAGTAAGAAA  1050
      |||| ||||||||||| ||||||||||||||||||| || |||| |||||
seq2  AAGC-ATGGAAATACT-ACGAGAGAAAAAGTTTATC-ACTTAGT-AGAAA  1038

seq1  ACAAATACAGCCTAGTGCGTGT-GAGGGAGAATGAGAAAAAAGCAGTCCG  1099
      |||||||||| ||||||||||| ||||||||||  | |||||||| ||||
seq2  ACAAATACAG-CTAGTGCGTGTGGAGGGAGAAT--GGAAAAAGCACTCCG  1085

seq1  TAAGCCGAAAGCAGCCCTGGGGTGTAATGGAATCTGAGCCCCGACCTTGG  1149
      ||||||| ||||| |||| ||| ||||| ||||| ||  |||||| ||||
seq2  TAAGCCG-AAGCA-CCCTTGGGGGTAAT-GAATC-GA-TCCCGACTTTGG  1130

seq1  ACTTCGG  1156
      |||||||
seq2  ACTTCGG  1137