BAC Information

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BAC

Clone NameB6Ng01-214M13
Chromosome4 (Build37)
Map Location 39,464,696 - 39,559,783
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC665520, LOC100039487, 1700009N14Rik
Downstream geneLOC435775, LOC329824, LOC621880, LOC384007, Aco1, Ddx58, Topors, Ndufb6, 4930509K18Rik, A930001M12Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214M13.bB6Ng01-214M13.g
ACCGA031939GA031940
length3971,000
definitionB6Ng01-214M13.b B6Ng01-214M13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(39,464,696 - 39,465,098)(39,558,836 - 39,559,783)
sequence
tccatcaaggaaaccaaattctagttaaacctgaaatagcctcaggaaga
atataaaatggaggaacctctgcactgtcttgccttatcatagtagcaga
ggaggttgctgaagtaaatactgacgtcttagggatattcgaaaaagtca
tatataaaactaccttctatttcatctatgtgtgtgtgtgttctcacatg
tgcatatgcacaaacatgcatgtgctcatattgaaggatttaattggaat
tctctacacaaagaattatactaatgccaaaagacataattgaaaaatta
aaagctcagtaccagtcccattggttgtgcaaatttatatgcctcagtac
aggggagcgccagggccaagaagtgggagtgggtgggtggggtagtg

gaattcaatgatcatctccaataaggcagccatggagaaggatttcttgt
gtgggtcaagaagacttaatgatatcattagctgagtcagatttcagatg
cagtcttaggataaaagaagaaacaaatctcccaggagtctgcctgtgct
aatggaagcactacactccaacgttgctatataaaaggtttcttttcaaa
atccatcctttgacttcctcctttcagagcatcccattgaaagatgatca
aagttcaagtttatatgaggagcttcacagggatttaagagaattaagag
gggagtaaggtgagcaaatcagaggtgtgtgaagtccaagatattactgg
actcaccaggaggtatacatgaatggtgtgtgtgctactgttgggcaagg
caagactctcctctaagccaaacttccactgtcttcatgagttcaactgt
taatgcttgcaaaatatcatcacagtggggtttttaactgctgatgtttc
ctcacagaaaaaaagcgatgaagagggttgttgcacctcactaataaggt
tgtagtctaccatgtctggatagctttcctaagctcagcacaaaatggaa
gaatcccttttctttttctttttttaaaaatttgtacaatttttttcatt
ttttattaggtattttcttcatttacaattcaaatgctatcccaaaaatc
ccttataccctccccccaccctgttccccaagccacccactccttcttcc
tggccctggtattcccctgtattagggcatataatctttgcaagaccaag
ggcctctcctcccaatgatggccaattaggccatcttctgctacacatgc
agctagagacacaagctcaggggtactggttagttcatattgctgttcct
cctatagggttatagacctcttcagctccttgggtactttctctagctcc
tccattgggggccatgtgttccatccaatagatgactgtgagcatccact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_39464696_39465098
seq2: B6Ng01-214M13.b_41_443

seq1  GAATTCTCCATCAAGGAAACCAAATTCTAGTTAAACCTGAAATAGCCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATCAAGGAAACCAAATTCTAGTTAAACCTGAAATAGCCTCA  50

seq1  GGAAGAATATAAAATGGAGGAACCTCTGCACTGTCTTGCCTTATCATAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAATATAAAATGGAGGAACCTCTGCACTGTCTTGCCTTATCATAGT  100

seq1  AGCAGAGGAGGTTGCTGAAGTAAATACTGACGTCTTAGGGATATTCGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGGAGGTTGCTGAAGTAAATACTGACGTCTTAGGGATATTCGAAA  150

seq1  AAGTCATATATAAAACTACCTTCTATTTCATCTATGTGTGTGTGTGTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCATATATAAAACTACCTTCTATTTCATCTATGTGTGTGTGTGTTCT  200

seq1  CACATGTGCATATGCACAAACATGCATGTGCTCATATTGAAGGATTTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGTGCATATGCACAAACATGCATGTGCTCATATTGAAGGATTTAAT  250

seq1  TGGAATTCTCTACACAAAGAATTATACTAATGCCAAAAGACATAATTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTCTCTACACAAAGAATTATACTAATGCCAAAAGACATAATTGAA  300

seq1  AAATTAAAAGCTCAGTACCAGTCCCATTGGTTGTGCAAATTTATATGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAAAAGCTCAGTACCAGTCCCATTGGTTGTGCAAATTTATATGCCT  350

seq1  CAGTACAGGGGAGCGCCAGGGCCAAGAAGTGGGAGTGGGTGGGTGGGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACAGGGGAGCGCCAGGGCCAAGAAGTGGGAGTGGGTGGGTGGGGTA  400

seq1  GTG  403
      |||
seq2  GTG  403


seq1: chr4_39558836_39559783
seq2: B6Ng01-214M13.g_65_1011 (reverse)

seq1  GCTAGAGAAAGTACCCAAGGAGCTGAAGAGGTCTATAACCCTATAGGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAGAAAGTACCCAAGGAGCTGAAGAGGTCTATAACCCTATAGGAGG  50

seq1  AACAGCAATATGAACTAACCAGTACCCCCTGAGCTTGTGTCTCTAGCTGC  100
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AACAGCAATATGAACTAACCAGTA-CCCCTGAGCTTGTGTCTCTAGCTGC  99

seq1  ATGTGTAGCAGAAGATGGCCTAATTGGCCATCATTGGGAGGAGAGGCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTAGCAGAAGATGGCCTAATTGGCCATCATTGGGAGGAGAGGCCCT  149

seq1  TGGTCTTGCAAAGATTATATGCCCTAATACAGGGGAATACCAGGGCCAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTTGCAAAGATTATATGCCCTAATACAGGGGAATACCAGGGCCAGG  199

seq1  AAGAAGGAGTGGGTGGCTTGGGGAACAGGGTGGGGGGAGGGTATAAGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGGAGTGGGTGGCTTGGGGAACAGGGTGGGGGGAGGGTATAAGGGA  249

seq1  TTTTTGGGATAGCATTTGAATTGTAAATGAAGAAAATACCTAATAAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGGATAGCATTTGAATTGTAAATGAAGAAAATACCTAATAAAAAA  299

seq1  TGAAAAAAATTGTACAAATTTTTAAAAAAAGAAAAAGAAAAGGGATTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAAAATTGTACAAATTTTTAAAAAAAGAAAAAGAAAAGGGATTCTT  349

seq1  CCATTTTGTGCTGAGCTTAGGAAAGCTATCCAGACATGGTAGACTACAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTGTGCTGAGCTTAGGAAAGCTATCCAGACATGGTAGACTACAAC  399

seq1  CTTATTAGTGAGGTGCAACAACCCTCTTCATCGCTTTTTTTCTGTGAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTAGTGAGGTGCAACAACCCTCTTCATCGCTTTTTTTCTGTGAGGA  449

seq1  AACATCAGCAGTTAAAAACCCCACTGTGATGATATTTTGCAAGCATTAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCAGCAGTTAAAAACCCCACTGTGATGATATTTTGCAAGCATTAAC  499

seq1  AGTTGAACTCATGAAGACAGTGGAAGTTTGGCTTAGAGGAGAGTCTTGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGAACTCATGAAGACAGTGGAAGTTTGGCTTAGAGGAGAGTCTTGCC  549

seq1  TTGCCCAACAGTAGCACACACACCATTCATGTATACCTCCTGGTGAGTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCAACAGTAGCACACACACCATTCATGTATACCTCCTGGTGAGTCC  599

seq1  AGTAATATCTTGGACTTCACACACCTCTGATTTGCTCACCTTACTCCCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATATCTTGGACTTCACACACCTCTGATTTGCTCACCTTACTCCCCT  649

seq1  CTTAATTCTCTTAAATCCCTGTGAAGCTCCTCATATAAACTTGAACTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATTCTCTTAAATCCCTGTGAAGCTCCTCATATAAACTTGAACTTTG  699

seq1  ATCATCTTTCAATGGGATGCTCTGAAAGGAGGAAGTCAAAGGATGGATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCTTTCAATGGGATGCTCTGAAAGGAGGAAGTCAAAGGATGGATTT  749

seq1  TGAAAAGAAACCTTTTATATAGCAACGTTGGAGTGTAGTGCTTCCATTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAGAAACCTTTTATATAGCAACGTTGGAGTGTAGTGCTTCCATTAG  799

seq1  CACAGGCAGACTCCTGGGAGATTTGTTTCTTCTTTTATCCTAAGACTGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGCAGACTCCTGGGAGATTTGTTTCTTCTTTTATCCTAAGACTGCA  849

seq1  TCTGAAATCTGACTCAGCTAATGATATCATTAAGTCTTCTTGACCCACAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAATCTGACTCAGCTAATGATATCATTAAGTCTTCTTGACCCACAC  899

seq1  AAGAAATCCTTCTCCATGGCTGCCTTATTGGAGATGATCATTGAATTC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATCCTTCTCCATGGCTGCCTTATTGGAGATGATCATTGAATTC  947


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