BAC Information

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BAC

Clone NameB6Ng01-215E20
Chromosome4 (Build37)
Map Location 76,365,052 - 76,366,279
singlet/doubletsinglet
Overlap geneLOC667858
Upstream geneLOC100039884, LOC667845, Ptprd
Downstream geneLOC667862
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215E20.bB6Ng01-215E20.g
ACCGA032310GA032311
length1,2111,215
definitionB6Ng01-215E20.b B6Ng01-215E20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgagagcaggagaaagtttcatcctcaataaagagcataacaat
tggttatcctataataaatggtcaactctgaaacatatacaaataatata
cagactgggaatgttgtacttacttatatacatagtagtatatatgtata
tacatttatatgtagataacagtaattcatgaaagtccataaatttgaaa
gcacacagggagtgtatgggaaattttagaggaagaaaaggaaagggagg
aatgatgtaattgcattatgacctcaaaacacacacaaaatataattttc
aaagaatccaagtgtgtgtgtggctatgtaatattccaatgttggccaca
gtgagtctatatatttttatataatgcactatggatatactaaatttatc
tatattgttaaatagagatagtgttcttaggaaccactgtctatagaaag
agattttattatattggaagataacctttgtagaggtaatttcatattat
taagatgattataatttttctttgtcataagatatttattgtacagatgt
cagttgagtatgcttatcacttaagatacattacatttagatacctttgt
ataatcaaaatattcccacaactaccactgtcttctatatgaaaatgttc
ctgactcgataacaaatatggtaatttttggagtgaatctaaaaaggaag
tgatctgtagagaagtttgtcctgtcaattctaggctgtggaatattctg
gctttgttcctgtgtatcagagtcctggttaagtatatagactcgtagat
gcaacaactttcctttttcacatttataggatgttatggtgttggttaca
gcatcagtacctcaggaaataggtagtacaggataatggaccataacaat
tagctcctatccatggaaaggtaagttgcatgggaaatgcatcaacaagt
tgatcattttggacttcattcataagaccttctaaacactccttaaaacc
gtttgccaagtgaaactctatatatcagacctctatatggctagatgttc
atttatttgatgttttgattgttgttatgctaataggcctttaagccagc
tctttattgcattctaggcaatattcacatggagcctatgcctctcaggc
cataattagatcctaagccaatttactagtcaattccttgtgcctaacga
gaatattgatg

gaattctgtttagctctgtatcccatttttttttaattgtgttattctct
tttataaaatctaacctcttgaggtctttgtatatttcgggtattagccc
tctatttgattgtagagttaggaaagatcttttcccaatctgtaatgtcc
tttttgtcctattgaatatgtcctttgccttactgaagcttttcagtttc
aagagatcctgtttatcaattgttgatcttacagcctgacccattggaat
tctattgaggaaattttcccatgctaatgtatttggggctcttcctcact
ttctttcctattagtttcaagtgtatcttgttttatgtggaggtccttga
tccacttggacttcagctttgtacaaggagataaaaatggagcaatttcc
attctactacatgcagatcatcagggagaccagcacaatttgttgaagat
gctttattttatcaactgtatggtcttggcttctttgtgaaagatcaagt
gtctatatatgtgtgggtttatttctggaacttcaattctatttcattga
tcaagctatctgtctctgtattaatactatgaggtttttgaactatagct
tttggtcatgtgtggtgattctccctgaatttcttttcttattgagaatt
gtttttgctatttggtattgagatttttgttattccatatgaacttgaaa
attgttctttctatctctgtgaagaaatcctatactccaaaaaactggaa
aatctacatgaattggatgattttatttttttagacaaatatcacatacc
aaagttaagtcagtatcgcataaactatctaaccagtcccataaccccta
aagggaatagaggcagtcattaaaagtctcaaacgccccaccccaaaatc
ccaagtccatagtgttttagtgttttagtgcagaattttatcagaacttc
aaagaacatctaataaccaatacttcctcttactattccacaaaaacaga
aacagaaggaacactacctaatcatctatgaagagtaactctgataccta
aaccaaagatccaacaagaaaatcgaattccataccagtttgccttatga
atatgatggcaaagaatctcaataactctcaatccaatccaaagaacaat
tgaatggatactcgcagaatcagaggcctttatctccgaagatgcacggg
gattgtgtctaccat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_76365052_76366279
seq2: B6Ng01-215E20.b_45_1254

seq1  GAATTCTGAGAGCAGGAGAAAGTTTCATCCTCAATAAAGAGCATAACAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGAGCAGGAGAAAGTTTCATCCTCAATAAAGAGCATAACAAT  50

seq1  TGGTTATCCTATAATAAATGGTCAACTCTGAAACATATACAAATAATATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTATCCTATAATAAATGGTCAACTCTGAAACATATACAAATAATATA  100

seq1  CAGACTGGGAATGTTGTACTTACTTATATACATAGTAGTATATATGTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTGGGAATGTTGTACTTACTTATATACATAGTAGTATATATGTATA  150

seq1  TACATTTATATGTAGATAACAGTAATTCATGAAAGTCCATAAATTTGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTATATGTAGATAACAGTAATTCATGAAAGTCCATAAATTTGAAA  200

seq1  GCACACAGGGAGTGTATGGGAAATTTTAGAGGAAGAAAAGGAAAGGGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACAGGGAGTGTATGGGAAATTTTAGAGGAAGAAAAGGAAAGGGAGG  250

seq1  AATGATGTAATTGCATTATGACCTCAAAACACACACAAAATATAATTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATGTAATTGCATTATGACCTCAAAACACACACAAAATATAATTTTC  300

seq1  AAAGAATCCAAGTGTGTGTGTGGCTATGTAATATTCCAATGTTGGCCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATCCAAGTGTGTGTGTGGCTATGTAATATTCCAATGTTGGCCACA  350

seq1  GTGAGTCTATATATTTTTATATAATGCACTATGGATATACTAAATTTATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTCTATATATTTTTATATAATGCACTATGGATATACTAAATTTATC  400

seq1  TATATTGTTAAATAGAGATAGTGTTCTTAGGAACCACTGTCTATAGAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTGTTAAATAGAGATAGTGTTCTTAGGAACCACTGTCTATAGAAAG  450

seq1  AGATTTTATTATATTGGAAGATAACCTTTGTAGAGGTAATTTCATATTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTATTATATTGGAAGATAACCTTTGTAGAGGTAATTTCATATTAT  500

seq1  TAAGATGATTATAATTTTTCTTTGTCATAAGATATTTATTGTACAGATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATGATTATAATTTTTCTTTGTCATAAGATATTTATTGTACAGATGT  550

seq1  CAGTTGAGTATGCTTATCACTTAAGATACATTACATTTAGATACCTTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGAGTATGCTTATCACTTAAGATACATTACATTTAGATACCTTTGT  600

seq1  ATAATCAAAATATTCCCACAACTACCACTGTCTTCTATATGAAAATGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCAAAATATTCCCACAACTACCACTGTCTTCTATATGAAAATGTTC  650

seq1  CTGACTCGATAACAAATATGGTAATTTTTGGAGTGAATCTAAAAAGGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTCGATAACAAATATGGTAATTTTTGGAGTGAATCTAAAAAGGAAG  700

seq1  TGATCTGTAGAGAAGTTTGTCCTGTCAATTCTAGGCTGTGGAATATTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTGTAGAGAAGTTTGTCCTGTCAATTCTAGGCTGTGGAATATTCTG  750

seq1  GCTTTGTTCCTGTGTATCAGAGTCCTGGTTAAGTATATAGACTCGTAGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGTTCCTGTGTATCAGAGTCCTGGTTAAGTATATAGACTCGTAGAT  800

seq1  GCAACAACTTTCCTTTTTCACATTTATAGGATGTTATGGTGTTGGTTACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACAACTTTCCTTTTTCACATTTATAGGATGTTATGGTGTTGGTTACA  850

seq1  GCATCAGTACCTCAGGAAATAGGTAGTACAGGATAATGGACCATAACAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAGTACCTCAGGAAATAGGTAGTACAGGATAATGGACCATAACAAT  900

seq1  TAGCTCCTATCCATGGAAAGGTAAGTTGCATGGG-AATGCATCAACAAGT  949
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TAGCTCCTATCCATGGAAAGGTAAGTTGCATGGGAAATGCATCAACAAGT  950

seq1  TGATCATTTTGGACTTCATTCATAAGACCTTCTAAACACTCCTTTAAAAA  999
      ||||||||||||||||||||||||||||||||||||||||||||  ||||
seq2  TGATCATTTTGGACTTCATTCATAAGACCTTCTAAACACTCCTT--AAAA  998

seq1  CCGTTTGCCAAGTGAAACTCTATTATATCAGACCTCTATATGGCTTAGAA  1049
      |||||||||||||||||||||| ||||||||||||||||||||| ||| |
seq2  CCGTTTGCCAAGTGAAACTCTA-TATATCAGACCTCTATATGGC-TAG-A  1045

seq1  TGTTTCATTTATTTGATTGTTTTTGTTTTGTTTTGTTTTATGCTAATAGG  1099
      || |||||||||||||       ||||||| ||  | ||||||||||| |
seq2  TG-TTCATTTATTTGA-------TGTTTTGATTGTTGTTATGCTAATA-G  1086

seq1  GCTTTTAAGCCCAGCTCTT--ATGCATTCTAGGCAAATATTCAAACAT-G  1146
      || |||||| |||||||||   |||||||||||| |||||||  |||| |
seq2  GCCTTTAAG-CCAGCTCTTTATTGCATTCTAGGC-AATATTC--ACATGG  1132

seq1  AG-CTATG-CTCTCAGGCCTTAATATAGGGATTTCCTAAGCAATTTTTAC  1194
      || ||||| |||||||||| |||| |||     |||||||| |  |||||
seq2  AGCCTATGCCTCTCAGGCCATAAT-TAG----ATCCTAAGCCA-ATTTAC  1176

seq1  TAGTCAAAATTCCTTGTGCTAAAC--GGATATTGAT  1228
      |||||  ||||||||||||  |||  | ||||||||
seq2  TAGTC--AATTCCTTGTGCCTAACGAGAATATTGAT  1210


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