BAC Information

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BAC

Clone NameB6Ng01-215H08
Chromosome4 (Build37)
Map Location 36,850,589 - 36,851,744
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100042132, LOC545600, LOC621458
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215H08.bB6Ng01-215H08.g
ACCGA032421GA032422
length1,1451,205
definitionB6Ng01-215H08.b B6Ng01-215H08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttcaaaagcaatgtctctccatctcttcatgtgtactacacag
tgccagaattcttgaaatgtaaaaaatacaattgattaatgaaatgttca
aagaaaaacatctgtcaaattacagactatagcatcaatttgatattatc
tcattatcattagataacttaaggaaaccacatttaaatatttaacttaa
tataaaatatgagaaagtaaccattatctttgttttgtccaagctttgaa
attaataacatggtagattttacagttcatctgtgaattttttacattgt
ctgagatagtattgaatgccatagttttcattcccttcctgggatttgtc
acttatcctctccaagacatatagataaatacaaagaaattttataccag
atggtattcttcatgaaaagcatattatggaatggcaaaataatctcttc
ttgaattaactgagagagtaattaaactagttctgattgttctcaaccat
tcctgttctatacttataaaactatatcacttaaagatagcatttttgtt
accttctatttactatgtacaaatcaatttttaaaaaactattcagttct
tcaactacattttaaaaagatacataatcttaaatacaattacatcccat
gtcttgaggaaactaacccaaactattatttattatgaataaaatttgag
tgttatggacatggctcaggagttagagtcacatacttctctttcagagt
tcacaattttgtttcctacagctatgtcaggcatatcaaattcacatgtg
gctctagacccagtatatctgaggccattttctggcttcttggggaccta
aatgcgtatttgcaaacatatagacagatcaatatgcatacatataatac
aagataaagtattttttaaaaagatagagcctaaaaatctactgaagtta
catatttttctgactatgactaaattcaataaatctgtttaaaaaaaaac
acatgagattaaggcagactgtggagtggcaggcagtgtactacacttca
aggtacacttttatactgtctacatgaatggcaaaacttttgcagtggag
cctgggagtgatcagcacttgctatacagaacagaactgagtctg

gaattcattggcacaagaaacaatttttgaacagaacatcaggctctaag
atcaacaattgatcattgggacctcatgaaatgtaaaagcttccataagg
caaaggacacacgctgtcatagcaaaatcagctacatacagattgagaaa
atatcttcactaaccttacacccaatggagggttaatgtccaaaataaat
aaagaatgcaagaagttagactccatcaaacaaataacacaatttaaaag
ggggtacagagctaaacagagaattctcaacagagggataaacaatggct
cagaagcacttaaagaaatattcaacatccttagtcataagggaaatgca
aaccaaaacaaccctgagattccacctttcaccagtcagcatggctaaaa
tcaaaactcaagtgacagcacatgttggcaaggatgcggagaaagagaaa
cactcctcaactggtggtactgcaaacttgtacaaccacactggaaatgg
aaatcaatctggtagtttctcacgaaattggaaatagtcctacctgaaga
cccagctataccattcctgggcatataaccaagaggctcaaccatgccaa
aggacatatgctccactgtgtttatagaaactttattcacaatagtcaca
gactgggcaaaagccatgtgtccctcaaatgaagagttgatacataaaat
gtgttcatttataaattaggatactattcagctattaaaaacaagatcat
caagaattttacaggcaaatggatagaactagaaaatatcatcctgggct
ggtgagatggctcagtgggtaagagcacccgactgctcttctgaaggtcc
agagttcaaatcccagcaaccacatggtggctcacaaccatccgtaacaa
gatctgactccctcttctggtgtgtctgagacagctacagtgtacttaca
tataataataaataaatctttaaaaaaggaaaagaattatcatcctgagt
gaggtaacccagaccccaaagaatattgcatgatatgtactccactgata
gtgaacatagcataaaatacaggaataccatgaattatcacagaccaagg
aggttaaacaaggaagagtcagtgaggatgcctgaattacttagagagga
cctaatagtcatagagttggcagaggaaggcttggaacccggtaggaatg
gacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_36850589_36851744
seq2: B6Ng01-215H08.b_48_1192

seq1  GAATTCTTTCAAAAGCAATGTCTCTCCATCTCTTCATGTGTACTACACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCAAAAGCAATGTCTCTCCATCTCTTCATGTGTACTACACAG  50

seq1  TGCCAGAATTCTTGAAATGTAAAAAATACAATTGATTAATGAAATGTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGAATTCTTGAAATGTAAAAAATACAATTGATTAATGAAATGTTCA  100

seq1  AAGAAAAACATCTGTCAAATTACAGACTATAGCATCAATTTGATATTATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAACATCTGTCAAATTACAGACTATAGCATCAATTTGATATTATC  150

seq1  TCATTATCATTAGATAACTTAAGGAAACCACATTTAAATATTTAACTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATCATTAGATAACTTAAGGAAACCACATTTAAATATTTAACTTAA  200

seq1  TATAAAATATGAGAAAGTAACCATTATCTTTGTTTTGTCCAAGCTTTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAATATGAGAAAGTAACCATTATCTTTGTTTTGTCCAAGCTTTGAA  250

seq1  ATTAATAACATGGTAGATTTTACAGTTCATCTGTGAATTTTTTACATTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATAACATGGTAGATTTTACAGTTCATCTGTGAATTTTTTACATTGT  300

seq1  CTGAGATAGTATTGAATGCCATAGTTTTCATTCCCTTCCTGGGATTTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGATAGTATTGAATGCCATAGTTTTCATTCCCTTCCTGGGATTTGTC  350

seq1  ACTTATCCTCTCCAAGACATATAGATAAATACAAAGAAATTTTATACCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATCCTCTCCAAGACATATAGATAAATACAAAGAAATTTTATACCAG  400

seq1  ATGGTATTCTTCATGAAAAGCATATTATGGAATGGCAAAATAATCTCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTATTCTTCATGAAAAGCATATTATGGAATGGCAAAATAATCTCTTC  450

seq1  TTGAATTAACTGAGAGAGTAATTAAACTAGTTCTGATTGTTCTCAACCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTAACTGAGAGAGTAATTAAACTAGTTCTGATTGTTCTCAACCAT  500

seq1  TCCTGTTCTATACTTATAAAACTATATCACTTAAAGATAGCATTTTTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTTCTATACTTATAAAACTATATCACTTAAAGATAGCATTTTTGTT  550

seq1  ACCTTCTATTTACTATGTACAAATCAATTTTTAAAAAACTATTCAGTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCTATTTACTATGTACAAATCAATTTTTAAAAAACTATTCAGTTCT  600

seq1  TCAACTACATTTTAAAAAGATACATAATCTTAAATACAATTACATCCCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTACATTTTAAAAAGATACATAATCTTAAATACAATTACATCCCAT  650

seq1  GTCTTGAGGAAACTAACCCAAACTATTATTTATTATGAATAAAATTTGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGAGGAAACTAACCCAAACTATTATTTATTATGAATAAAATTTGAG  700

seq1  TGTTATGGACATGGCTCAGGAGTTAGAGTCACATACTTCTCTTTCAGAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATGGACATGGCTCAGGAGTTAGAGTCACATACTTCTCTTTCAGAGT  750

seq1  TCACAATTTTGTTTCCTACAGCTATGTCAGGCATATCAAATTCACATGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAATTTTGTTTCCTACAGCTATGTCAGGCATATCAAATTCACATGTG  800

seq1  GCTCTAGACCCAGTATATCTGAGGCCATTTTCTGGCTTCTTGGGGACCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTAGACCCAGTATATCTGAGGCCATTTTCTGGCTTCTTGGGGACCTA  850

seq1  AATGCGTATTTGCAAACATATAGACAGATCAATATGCATACATATAATAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCGTATTTGCAAACATATAGACAGATCAATATGCATACATATAATAC  900

seq1  AAGATAAAGTATTTTTTAAAAAGATAGAGCCTAAAAATCTACTGAAGTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAAAGTATTTTTTAAAAAGATAGAGCCTAAAAATCTACTGAAGTTA  950

seq1  CATATTTTTCTGACTATGACTAAATTCAATAAAATCTGTTTAAAAAAAAA  1000
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CATATTTTTCTGACTATGACTAAATTCAAT-AAATCTGTTTAAAAAAAAA  999

seq1  CACATGAAGATTAAGGCAGACTGTGGAGTGGCAGGCAGGTTGTAACTACA  1050
      |||||| |||||||||||||||||||||||||||||||  ||| ||||||
seq2  CACATG-AGATTAAGGCAGACTGTGGAGTGGCAGGCAG--TGT-ACTACA  1045

seq1  CTTCAAGGTACAC-TTTATACTGTCTACATGAATGGCAAAAACCTTTGCA  1099
      ||||||||||||| ||||||||||||||||||||||| ||||| ||||||
seq2  CTTCAAGGTACACTTTTATACTGTCTACATGAATGGC-AAAACTTTTGCA  1094

seq1  GTTGGAGCTGGGGAAGTGAATCAGCACTTGCTATACAGGAACAAGGGACT  1149
      | ||||||  ||| |||| |||||||||||||||||| |||||  | |||
seq2  G-TGGAGCCTGGG-AGTG-ATCAGCACTTGCTATACA-GAACA--GAACT  1138

seq1  GAGTCTG  1156
      |||||||
seq2  GAGTCTG  1145


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