BAC Information

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BAC

Clone NameB6Ng01-215M14
Chromosome4 (Build37)
Map Location 116,300,052 - 116,477,847
singlet/doubletdoublet
Overlap geneNasp, Akr1a4, Prdx1, Mmachc, 0610037D15Rik, Tesk2, Toe1
Upstream geneCyp4b1, LOC546843, 4732418C07Rik, 4930544O15Rik, Atpaf1, Mobkl2c, Mknk1, Kncn, 6430628N08Rik, Dmbx1, Faah, Nsun4, Uqcrh, Lrrc41, Rad54l, 1520402A15Rik, Pomgnt1, Tspan1, 1700042G07Rik, LOC433748, Pik3r3, Mast2, LOC631400, Ipp, Tmem69, Gpbp1l1, LOC622665
Downstream geneMutyh, Hpdl, LOC625336, LOC100041048, Zswim5, Urod, Hectd3, Eif2b3, Ptch2, 9530048O09Rik, LOC100041324, 4833401D15Rik, Plk3, Best4-ps, LOC625405, Rps8, Kif2c, Gm1661, Tmem53, 4931406I20Rik, LOC100041093, Prnpip1, Dmap1, LOC433749, Klf17
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215M14.bB6Ng01-215M14.g
ACCGA032653GA032654
length1,1421,175
definitionB6Ng01-215M14.b B6Ng01-215M14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(116,300,052 - 116,301,193)(116,476,679 - 116,477,847)
sequence
gaattccggacagcagagactcactcaggtagagaaaatggcagattgga
gaccccgcgcggttgaggccctcttatataccaggtcccttgtcccgccc
atccacttccggatcctcccccctcggatttaaaggactaggactcaaca
cctttctgtcacaaggacacagccctgtatcccttcccgtttgggtatct
tcccgccctagcccgtttttccttaaaaaaagaaaaaaagaaaaagaaag
taagatagaaaggaaaaagaaaacaaaaatcaaacaatttcctgcttctg
tggctagtcgtgatagaagcaaaatctcagtactacaacttctgaatggg
agccagcctagagattccacaattaagtggagccagtgagtctctgcgac
tgtggaaaaagtagtcccgaaggtgtctttctgacggggatacccgagaa
ggtgacaggtattccctatgtcctctcagtcttaacggatggaaacgcaa
gagctgagcacgagtacagcagcaacggctagaactgaccagacagacgc
gtggctctgggcctcagcaactactgacgaaacaagatgctgctctagga
ttggctacagataaaactatcgcgcttgattcaaaactcttagaggggca
aagggatgcgggtgtttagatccaccgcctttgactgatccaatccgttg
ctgccatcatcttactttacccacgtccaagttgttaagttaaatcctgt
acttaaaacactttaaatattttagctgtctctctttttttttctttcat
atatattaggtagggacttacagtctatccctggctagcctgaaacttgc
tatttagacccactgatctctaacccacagacatctgcctgcctgtgatt
gcgagggctgggattacaggtgagcagcaccacacacgccttcttttaca
accttttgtaactccagttcaagggcattcaaatcaatgccttcctgtga
ccaccagagccactaggcacacacatgggtacacatttatgttatgcaga
tacactcatacacattaaataaaaggtaatgtggctgggaaatttcgcta
ggaggtagagccttgttattcctgcaaaggattctgttcaat
gaattctgcagctatccatctagcatgagcgggcacattgactaccgctg
ctgtatgtcccctgggacctgccgtcgttctcgtaccactggcatctgtg
acaagttctcggtgagtaaatgtccatttcttggggagggaaggctctga
tgtatggagccccttcttacacttttccaacctccaggcctatggctggt
gtcctctgggaccacagtgtcctcagtcacacgatattgaccttataatt
gacactgatgaggctgtggcagaagataagcggcggagacggcgacgtaa
ggacaaacggaagaggtctttacagagccaaccagggacacagacccttg
cggaagctgaagatggtcctcccacaaaacaggtctgtgaagatagcctc
gagactgagaaaatggaacaaaaagtggcagaaggtgaggctggggatca
gcctggctccagggaaggtcacacaagtagcttggagatggcacatagga
ggacaagtgctgaaacagctgatgtggccacctcagagctgctggtgaac
caagccagcactaaccccgtgcctggggacggactgcatcgtgctggttt
tgacgcctttatgacaggctatgtgatggcctatgtgggcctgagccagg
gacttcaactctgcagctctgaaccttggcttcctgaatgtcacaacaag
gtatatctaagtggcaaaactgtacccctcacagtgaccaagagccagtt
ttcccgtccatccaaagcccacaaccagaaaatgaagctggcttggggca
gcagctgactccaacatctgcctggtaactaggcccagggaaagaagcga
agagtaagagaagagatgtttggcagagtgtagtggcttgtgttggtcat
tccaggaacctaagggctaaggcaggaggacttgttacagttcatggtct
tacatagtctcaagtcaccccagagcttatacagcaaattcatattttca
aaaataagtcatttgagtcttttatctaattatgtcaccatttactgcta
cagagtgtcgagcagttcttggcaacactgactacttcagtactgttctt
tctttttgcagactcgaaggccttgggtacaaataagcttaacttagcac
tgcaactcaacttttattatttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_116300052_116301193
seq2: B6Ng01-215M14.b_49_1190

seq1  GAATTCCGGACAGCAGAGACTCACTCAGGTAGAGAAAATGGCAGATTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCGGACAGCAGAGACTCACTCAGGTAGAGAAAATGGCAGATTGGA  50

seq1  GACCCCGCGCGGTTGAGGCCCTCTTATATACCAGGTCCCTTGTCCCGCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCCGCGCGGTTGAGGCCCTCTTATATACCAGGTCCCTTGTCCCGCCC  100

seq1  ATCCACTTCCGGATCCTCCCCCCTCGGATTTAAAGGACTAGGACTCAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACTTCCGGATCCTCCCCCCTCGGATTTAAAGGACTAGGACTCAACA  150

seq1  CCTTTCTGTCACAAGGACACAGCCCTGTATCCCTTCCCGTTTGGGTATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTGTCACAAGGACACAGCCCTGTATCCCTTCCCGTTTGGGTATCT  200

seq1  TCCCGCCCTAGCCCGTTTTTCCTTAAAAAAAGAAAAAAAGAAAAAGAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGCCCTAGCCCGTTTTTCCTTAAAAAAAGAAAAAAAGAAAAAGAAAG  250

seq1  TAAGATAGAAAGGAAAAAGAAAACAAAAATCAAACAATTTCCTGCTTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATAGAAAGGAAAAAGAAAACAAAAATCAAACAATTTCCTGCTTCTG  300

seq1  TGGCTAGTCGTGATAGAAGCAAAATCTCAGTACTACAACTTCTGAATGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTAGTCGTGATAGAAGCAAAATCTCAGTACTACAACTTCTGAATGGG  350

seq1  AGCCAGCCTAGAGATTCCACAATTAAGTGGAGCCAGTGAGTCTCTGCGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGCCTAGAGATTCCACAATTAAGTGGAGCCAGTGAGTCTCTGCGAC  400

seq1  TGTGGAAAAAGTAGTCCCGAAGGTGTCTTTCTGACGGGGATACCCGAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAAAAAGTAGTCCCGAAGGTGTCTTTCTGACGGGGATACCCGAGAA  450

seq1  GGTGACAGGTATTCCCTATGTCCTCTCAGTCTTAACGGATGGAAACGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACAGGTATTCCCTATGTCCTCTCAGTCTTAACGGATGGAAACGCAA  500

seq1  GAGCTGAGCACGAGTACAGCAGCAACGGCTAGAACTGACCAGACAGACGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGAGCACGAGTACAGCAGCAACGGCTAGAACTGACCAGACAGACGC  550

seq1  GTGGCTCTGGGCCTCAGCAACTACTGACGAAACAAGATGCTGCTCTAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTCTGGGCCTCAGCAACTACTGACGAAACAAGATGCTGCTCTAGGA  600

seq1  TTGGCTACAGATAAAACTATCGCGCTTGATTCAAAACTCTTAGAGGGGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTACAGATAAAACTATCGCGCTTGATTCAAAACTCTTAGAGGGGCA  650

seq1  AAGGGATGCGGGTGTTTAGATCCACCGCCTTTGACTGATCCAATCCGTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGATGCGGGTGTTTAGATCCACCGCCTTTGACTGATCCAATCCGTTG  700

seq1  CTGCCATCATCTTACTTTACCCACGTCCAAGTTGTTAAGTTAAATCCTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCATCATCTTACTTTACCCACGTCCAAGTTGTTAAGTTAAATCCTGT  750

seq1  ACTTAAAACACTTTAAATATTTTAGCTGTCTCTCTTTTTTTTTCTTTCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAAACACTTTAAATATTTTAGCTGTCTCTCTTTTTTTTTCTTTCAT  800

seq1  ATATATTAGGTAGGGACTTACAGTCTATCCCTGGCTAGCCTGAAACTTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTAGGTAGGGACTTACAGTCTATCCCTGGCTAGCCTGAAACTTGC  850

seq1  TATTTAGACCCACTGATCTCTAACCCACAGACATCTGCCTGCCTGTGATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAGACCCACTGATCTCTAACCCACAGACATCTGCCTGCCTGTGATT  900

seq1  GCGAGGGCTGGGATTACAGGTGAGCAGCACCACACACGCCTTCTTTTACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAGGGCTGGGATTACAGGTGAGCAGCACCACACACGCCTTCTTTTACA  950

seq1  ACCTTTTGTAACTCCAGTTCAAGGGCATTC-AATCAATGCCTTCCTGTGA  999
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ACCTTTTGTAACTCCAGTTCAAGGGCATTCAAATCAATGCCTTCCTGTGA  1000

seq1  CCACCAGAGCCACTAGGCACACACAT-GGTACACATTTATG-TATGCAGA  1047
      |||||||||||||||||||||||||| |||||||||||||| ||||||||
seq2  CCACCAGAGCCACTAGGCACACACATGGGTACACATTTATGTTATGCAGA  1050

seq1  TACACTCATACACATTAAATAAAAGTAAATGTGGCT-GGAAAATTCGCTA  1096
      |||||||||||||||||||||||||  ||||||||| ||||| |||||||
seq2  TACACTCATACACATTAAATAAAAGGTAATGTGGCTGGGAAATTTCGCTA  1100

seq1  GGAGGTTAGGAGCACTTGTTATTCTTGCAAAGGATCCTGTTTCAAT  1142
      ||||||   |||| |||||||||| |||||||||| ||| ||||||
seq2  GGAGGT--AGAGC-CTTGTTATTCCTGCAAAGGATTCTG-TTCAAT  1142

seq1: chr4_116476679_116477847
seq2: B6Ng01-215M14.g_67_1241 (reverse)

seq1  AAAAAATAAT-AAAGTTGATGTTGCAGGTGCT-AGTTAGCCTTATTTGTA  48
      |||||||||| |||||||| |||||| ||||| |||||  ||||||||||
seq2  AAAAAATAATAAAAGTTGA-GTTGCA-GTGCTAAGTTAAGCTTATTTGTA  48

seq1  CCC-AGGCCTCTGAGTCTGC-AAAAGAA--GACAGTACTGAAGTAGTCAG  94
      ||| ||||||  |||||||| |||||||   |||||||||||||||||||
seq2  CCCAAGGCCTTCGAGTCTGCAAAAAGAAAGAACAGTACTGAAGTAGTCAG  98

seq1  TGTTTGCCAGGACCTGCTCGACAACTCTGTAGCAGTTAAATGTGACATAA  144
      || |||||| || ||||||||| ||||||||||||| ||  |||||||||
seq2  TG-TTGCCAAGAACTGCTCGAC-ACTCTGTAGCAGTAAATGGTGACATAA  146

seq1  TTAGATTAAAGACTCAAATGACTTATTTTTG-AAATATGATTTTGCTGTA  193
      |||||| |||||||||||||||||||||||| |||||||| |||||||||
seq2  TTAGATAAAAGACTCAAATGACTTATTTTTGAAAATATGAATTTGCTGTA  196

seq1  T-AGCTCT-GGGTGACTTGGGACTATGT-AGACCATGAACTTGTAAC-AG  239
      | |||||| |||||||||| |||||||| ||||||||||| |||||| ||
seq2  TAAGCTCTGGGGTGACTTGAGACTATGTAAGACCATGAAC-TGTAACAAG  245

seq1  TCCTCCTGCCTTAGCCCTTAGGTTCCTGGAATGACCAACACAAGCCACTA  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTGCCTTAGCCCTTAGGTTCCTGGAATGACCAACACAAGCCACTA  295

seq1  CACTCTGCCAAACATCTCTTCTCCTACTCTTCGCTTCTTTCCCTGGGCCT  339
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CACTCTGCCAAACATCTCTTCTCTTACTCTTCGCTTCTTTCCCTGGGCCT  345

seq1  AGTTACCAGGCAGATGTTGGAGTCAGCTGCTGCCCCAAGCCAGCTTCATT  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACCAGGCAGATGTTGGAGTCAGCTGCTGCCCCAAGCCAGCTTCATT  395

seq1  TTCTGGTTGTGGGCTTTGGATGGACGGGAAAACTGGCTCTTGGTCACTGT  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGTTGTGGGCTTTGGATGGACGGGAAAACTGGCTCTTGGTCACTGT  445

seq1  GAGGGGTACAGTTTTGCCACTTAGATATACCTTGTTGTGACATTCAGGAA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGTACAGTTTTGCCACTTAGATATACCTTGTTGTGACATTCAGGAA  495

seq1  GCCAAGGTTCAGAGCTGCAGAGTTGAAGTCCCTGGCTCAGGCCCACATAG  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGGTTCAGAGCTGCAGAGTTGAAGTCCCTGGCTCAGGCCCACATAG  545

seq1  GCCATCACATAGCCTGTCATAAAGGCGTCAAAACCAGCACGATGCAGTCC  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCACATAGCCTGTCATAAAGGCGTCAAAACCAGCACGATGCAGTCC  595

seq1  GTCCCCAGGCACGGGGTTAGTGCTGGCTTGGTTCACCAGCAGCTCTGAGG  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCAGGCACGGGGTTAGTGCTGGCTTGGTTCACCAGCAGCTCTGAGG  645

seq1  TGGCCACATCAGCTGTTTCAGCACTTGTCCTCCTATGTGCCATCTCCAAG  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCACATCAGCTGTTTCAGCACTTGTCCTCCTATGTGCCATCTCCAAG  695

seq1  CTACTTGTGTGACCTTCCCTGGAGCCAGGCTGATCCCCAGCCTCACCTTC  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTGTGTGACCTTCCCTGGAGCCAGGCTGATCCCCAGCCTCACCTTC  745

seq1  TGCCACTTTTTGTTCCATTTTCTCAGTCTCGAGGCTATCTTCACAGACCT  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACTTTTTGTTCCATTTTCTCAGTCTCGAGGCTATCTTCACAGACCT  795

seq1  GTTTTGTGGGAGGACCATCTTCAGCTTCCGCAAGGGTCTGTGTCCCTGGT  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTGGGAGGACCATCTTCAGCTTCCGCAAGGGTCTGTGTCCCTGGT  845

seq1  TGGCTCTGTAAAGACCTCTTCCGTTTGTCCTTACGTCGCCGTCTCCGCCG  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCTGTAAAGACCTCTTCCGTTTGTCCTTACGTCGCCGTCTCCGCCG  895

seq1  CTTATCTTCTGCCACAGCCTCATCAGTGTCAATTATAAGGTCAATATCGT  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCTTCTGCCACAGCCTCATCAGTGTCAATTATAAGGTCAATATCGT  945

seq1  GTGACTGAGGACACTGTGGTCCCAGAGGACACCAGCCATAGGCCTGGAGG  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTGAGGACACTGTGGTCCCAGAGGACACCAGCCATAGGCCTGGAGG  995

seq1  TTGGAAAAGTGTAAGAAGGGGCTCCATACATCAGAGCCTTCCCTCCCCAA  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAAAGTGTAAGAAGGGGCTCCATACATCAGAGCCTTCCCTCCCCAA  1045

seq1  GAAATGGACATTTACTCACCGAGAACTTGTCACAGATGCCAGTGGTACGA  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGGACATTTACTCACCGAGAACTTGTCACAGATGCCAGTGGTACGA  1095

seq1  GAACGACGGCAGGTCCCAGGGGACATACAGCAGCGGTAGTCAATGTGCCC  1139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACGACGGCAGGTCCCAGGGGACATACAGCAGCGGTAGTCAATGTGCCC  1145

seq1  GCTCATGCTAGATGGATAGCTGCAGAATTC  1169
      ||||||||||||||||||||||||||||||
seq2  GCTCATGCTAGATGGATAGCTGCAGAATTC  1175