BAC Information

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BAC

Clone NameB6Ng01-216E01
Chromosome4 (Build37)
Map Location 33,432,530 - 33,433,765
singlet/doubletsinglet
Overlap geneRngtt
Upstream geneBach2, Gja10, Casp8ap2, Mdn1, Lyrm2, Ankrd6, LOC665298, Rragd, 4933421O10Rik, Ube2j1, LOC100039142, Gabrr2, Gabrr1, Acy1l2, Srrp, Pnrc1
Downstream geneLOC100041919, LOC100041924, Cnr1, Spaca1, LOC100039220, LOC665361, LOC665367
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-216E01.bB6Ng01-216E01.g
ACCGA032991GA032992
length1,2541,166
definitionB6Ng01-216E01.b B6Ng01-216E01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttgctatctggccctcatagttgccttttgaatctacgtatat
gtgatcattttctttttgttttctttagtgctatagacacttgtttttag
ctattagaatgatccatgcagaatgtcttatgcttgacacttttctgtca
gtatcaacaaagtagcactcagtttttaaaaagagattacttatgtgtta
cgtgtgcatatctgtgtaagcatacagtgtgtatggcgatgctgctggac
acagctagagtagagttacaatagtttaagctgctggatgcgagtgcggg
caactgaactcaggtcttttgcaagagcaacaagagaccactgagccttc
tctcctgcccgagaggagttgatttctagtagtgtaacccattaaacatt
tttcattgatgttaaagaaaagtgaaaatgaaggtcatagaatagctctg
tcccacggccaagtgcttataaccttgcaaaccaagcaaaagctgttctg
aattttcgaaagctctatctctgtgcataaaagagacacaaaacaagctt
cagtctttgtcagcatgattcagtgagatcaaaccagagttatggaggca
gattagattatgcagacctgctggcctggaaagaactcttcatgcttagc
agctagccatagaggtggtgagcagcttcacccttcaaattattgtctgc
tgccgtcactgtcagcccagccactgacctcttggtgtaacaggaaagtt
gtacaagttttcactcacctggttttgtttcattttattttttcctgtgt
gcataaactagaaccaagtatttcccactttttacttttaggcttagaag
attttgacatagggtctcctgtagcccaggtggccttgggctgtctgcat
cctcctcccaagtgctgggattacaggtgtgtgccagtgcacgcagtctt
ctcttttcacatgttcttaattatgtttcttagaaaataccatagttcca
tgatttgctcattcctaaattttttttttcttttgcaaagtaattggggg
aagttttattttaagcacagcaatggaaattgatcaggattcttgcaaga
tatcccatggttggaagattacctcaaggccttaccttcttgatttttta
acatattatattgcagggacctttcttctgtaattgctttattaaaatta
gtatgttaaagcaattcttaatttggttgggaattaggcttttttcaata
aaat

gaattctgtgcaggtgatagatacagatctattttcattcttctgcatgc
agctatcccatctaaccagaaccatttgttgaagatgatctattttctcc
cttatatatttctggcttctttgtttaaaaaaaaaaaaagcaggtatcca
taggtatacagaattatgcctgggtgttagatttgattccattgatctac
atatctggttttttccaatattatgttgtattttattattataaatctgt
aatatacaactgggtatctggagatgttcttttattattcaagactcttt
tggctatctttttttgcgtgacacatatctgtgtttccctgttaaagttt
ttttttccaatttctgtgaagaactatattggaatttttatggggactga
attgaatctctagaaatcttttagtagtagttaagacctaggctgggtct
gctctggaagggcagcctatgagggtggagtgagctttggcaggggcaag
acttggtcttgcagaagcagaggttgcttaatattaataatatttactct
ccttgattccaatggcttcaagagaattatcacctgttgtttagcagccc
tgggaataagtaaagaattaattgctagggctcctttctctcttgctagg
gagtctcacctctcattggccaggtaagagggaggctgggaacaattaac
ttttattgagccaagaaaataaaaagtcacgcatgcagaatgaagcactt
ttacacatgcaaatatgcacagaaacacatatacattcacacatacatat
ttttacatacatactttggccaggcccaactacatgtctcattaacttac
atactcacatctctacttacacattatgcatatttaatatacatattgca
tgcatacgcacatgtacacacgcacacacacacacaacaatttgatggct
gacacagaagcctgagcactgaaagaactcattctggatgaaaaatagca
ccaacctctattgcatagaagaaggaaaagtttctacctttttatttgag
tataaaaaaggccctgtactgtcagtgagaggaatctggattgtaaggag
atttcttgtgtcatttaaagagcagccactgctggttcttcggcgtattc
tcttggatctgggttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_33432530_33433765
seq2: B6Ng01-216E01.b_43_1296

seq1  GAATTCCTTGCTATCTGGCCCTCATAGTTGCCTTTTGAATCTACGTATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGCTATCTGGCCCTCATAGTTGCCTTTTGAATCTACGTATAT  50

seq1  GTGATCATTTTCTTTTTGTTTTCTTTAGTGCTATAGACACTTGTTTTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCATTTTCTTTTTGTTTTCTTTAGTGCTATAGACACTTGTTTTTAG  100

seq1  CTATTAGAATGATCCATGCAGAATGTCTTATGCTTGACACTTTTCTGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAGAATGATCCATGCAGAATGTCTTATGCTTGACACTTTTCTGTCA  150

seq1  GTATCAACAAAGTAGCACTCAGTTTTTAAAAAGAGATTACTTATGTGTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCAACAAAGTAGCACTCAGTTTTTAAAAAGAGATTACTTATGTGTTA  200

seq1  CGTGTGCATATCTGTGTAAGCATACAGTGTGTATGGCGATGCTGCTGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTGCATATCTGTGTAAGCATACAGTGTGTATGGCGATGCTGCTGGAC  250

seq1  ACAGCTAGAGTAGAGTTACAATAGTTTAAGCTGCTGGATGCGAGTGCGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTAGAGTAGAGTTACAATAGTTTAAGCTGCTGGATGCGAGTGCGGG  300

seq1  CAACTGAACTCAGGTCTTTTGCAAGAGCAACAAGAGACCACTGAGCCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGAACTCAGGTCTTTTGCAAGAGCAACAAGAGACCACTGAGCCTTC  350

seq1  TCTCCTGCCCGAGAGGAGTTGATTTCTAGTAGTGTAACCCATTAAACATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTGCCCGAGAGGAGTTGATTTCTAGTAGTGTAACCCATTAAACATT  400

seq1  TTTCATTGATGTTAAAGAAAAGTGAAAATGAAGGTCATAGAATAGCTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTGATGTTAAAGAAAAGTGAAAATGAAGGTCATAGAATAGCTCTG  450

seq1  TCCCACGGCCAAGTGCTTATAACCTTGCAAACCAAGCAAAAGCTGTTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACGGCCAAGTGCTTATAACCTTGCAAACCAAGCAAAAGCTGTTCTG  500

seq1  AATTTTCGAAAGCTCTATCTCTGTGCATAAAAGAGACACAAAACAAGCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCGAAAGCTCTATCTCTGTGCATAAAAGAGACACAAAACAAGCTT  550

seq1  CAGTCTTTGTCAGCATGATTCAGTGAGATCAAACCAGAGTTATGGAGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTTGTCAGCATGATTCAGTGAGATCAAACCAGAGTTATGGAGGCA  600

seq1  GATTAGATTATGCAGACCTGCTGGCCTGGAAAGAACTCTTCATGCTTAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAGATTATGCAGACCTGCTGGCCTGGAAAGAACTCTTCATGCTTAGC  650

seq1  AGCTAGCCATAGAGGTGGTGAGCAGCTTCACCCTTCAAATTATTGTCTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGCCATAGAGGTGGTGAGCAGCTTCACCCTTCAAATTATTGTCTGC  700

seq1  TGCCGTCACTGTCAGCCCAGCCACTGACCTCTTGGTGTAACAGGAAAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCGTCACTGTCAGCCCAGCCACTGACCTCTTGGTGTAACAGGAAAGTT  750

seq1  GTACAAGTTTTCACTCACCTGGTTTTGTTTCATTTTATTTTTTCCTGTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAGTTTTCACTCACCTGGTTTTGTTTCATTTTATTTTTTCCTGTGT  800

seq1  GCATAAACTAGAACCAAGTATTTCCCACTTTTTACTTTTAGGCTTAGAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAAACTAGAACCAAGTATTTCCCACTTTTTACTTTTAGGCTTAGAAG  850

seq1  ATTTTGACATAGGGTCTCCTGTAGCCCAGGTTGGCCTTGGGCTGTCTGCA  900
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ATTTTGACATAGGGTCTCCTGTAGCCCAGG-TGGCCTTGGGCTGTCTGCA  899

seq1  TCCTCCTCCCAAGTGCTGGGATTACAGGTGTGTGCCAGTGCACGCAGTCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTCCCAAGTGCTGGGATTACAGGTGTGTGCCAGTGCACGCAGTCT  949

seq1  TCTCTTTTCACATGTTCTTAATTATGTTTCTTAG-AAATACCATAGTTCC  999
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TCTCTTTTCACATGTTCTTAATTATGTTTCTTAGAAAATACCATAGTTCC  999

seq1  ATGATTTGCTCATTCCTAAA-TGTTTATTTCTTTTGCAAAGTAGT--GGG  1046
      |||||||||||||||||||| | ||| |||||||||||||||| |  |||
seq2  ATGATTTGCTCATTCCTAAATTTTTTTTTTCTTTTGCAAAGTAATTGGGG  1049

seq1  GAAG-TTTATTTAAAGCACAGCAGTGGAAA-TGATCAGAATTC-TGCAAG  1093
      |||| ||||||| |||||||||| |||||| ||||||| |||| ||||||
seq2  GAAGTTTTATTTTAAGCACAGCAATGGAAATTGATCAGGATTCTTGCAAG  1099

seq1  -TATCCCATG--TGG-AGAT--ACTCAAAGGCTTAGCTTC-TGAATTTAT  1136
       |||||||||  ||| ||||   ||||| | |||| |||| ||| ||| |
seq2  ATATCCCATGGTTGGAAGATTACCTCAAGGCCTTACCTTCTTGATTTTTT  1149

seq1  AACA---TATAATGCA-GGACATTTCT--CGTAAAATGTTTATATAATAT  1180
      ||||   |||| |||| |||| |||||   ||||    |||||  ||  |
seq2  AACATATTATATTGCAGGGACCTTTCTTCTGTAATTGCTTTATTAAAATT  1199

seq1  AGTATGTTAGAGGCAATATCTTAATTTTGTTGTAGATTAGG-TATTTTCA  1229
      ||||||||| | ||||| ||||||||| ||||   |||||| | ||||||
seq2  AGTATGTTA-AAGCAAT-TCTTAATTTGGTTGGGAATTAGGCTTTTTTCA  1247

seq1  ATAAAAT  1236
      |||||||
seq2  ATAAAAT  1254


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