BAC Information

Click to search

BAC

Clone NameB6Ng01-216E04
Chromosome4 (Build37)
Map Location 70,965,057 - 70,965,357
singlet/doubletsinglet
Overlap genenone
Upstream geneCdk5rap2, Megf9, LOC100039565
Downstream geneLOC100039979, LOC667638, EG667649, Tle1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-216E04.bB6Ng01-216E04.g
ACCGA032997GA032998
length3011,115
definitionB6Ng01-216E04.b B6Ng01-216E04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tcttctgtcaaaactacaatggtggctcactgttacatatcttgggttaa
ctgttgaagggagaaaatatccaggaaaatccctttggtgttgtagcaaa
tctgaggcagcactaaggaggtaataaagactgacttgccaaaactaagc
agccttctgaatattgagctgctccaagcactctgtgaggaaagctgaag
taattgttctccacgggcgtgcaagcagcatccatgaaataagatatata
ttctttacatgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
g

gaattcattgatacataaatctgacttgctagctttgtttctactgggta
aatgggtattgtggcagcagactgtggggtggacagtctttggtggggct
ggagtggcagcaaaaggaactcaggagctccaaccctgccagagagttgc
cgggcagagagtagctgacagtagtgcaggaaccttgccagtcattttta
atatttcccacaacaagtgtagaacctccatgtttggcaggaatccacta
gaaatttagtttagtagcctgacagttaaaggttaatttgctaagtgaga
gaaaggtggctctagataagtcacttttttgttttgtttttattgttttg
ctttgttttttgtttgtttgtttgtttgtttaggttttggtttttcgaga
caggatttctctgtatagccctggctgtcctggaactcactttgtagacc
aggctggccttgaactcagaaatctgcctgcctctgcctcccaagcgctg
gattaaaggcatgctccaccatgccccactttagttgaatcacttgactc
aagcatggggaattgaaacaaagcatcccttgaggttccctgctgtgggg
aattgcaggctgctctgagtcaggagaagaatgaaatctcctactattta
gggcagagggattgaactgtgaaactaaaattgggattatttgcttttag
gatagatttatatagagattctgtccgaatcaggtggggaataggcagtg
atgataattgcctgctatttacatatttacaggtattaaatattgtctgt
ggctcctgatatatatatatatattataacaggtattaataaaatatgtc
tgtggctccaggcagagagacaaacagaaaaatggtatacaagatgactg
ctctaggcagagagccgaaaaatagatgatatgaagattgctttatacgc
ttcacaggatactagaattctgtctaatgtggtctcaatggaatccttgg
gttttttttatctgtctgaaaaaatagacaggccttaagaaatagcacat
atggttattgtagttttaccttcactttgttttggggggtttggggaggg
atagtaatctttcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_70965057_70965357
seq2: B6Ng01-216E04.b_45_345 (reverse)

seq1  CACACACACACACACACACACACACACACACACACACACTCATGTAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACACTCATGTAAAGA  50

seq1  ATATATATCTTATTTCATGGATGCTGCTTGCACGCCCGTGGAGAACAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATCTTATTTCATGGATGCTGCTTGCACGCCCGTGGAGAACAATT  100

seq1  ACTTCAGCTTTCCTCACAGAGTGCTTGGAGCAGCTCAATATTCAGAAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAGCTTTCCTCACAGAGTGCTTGGAGCAGCTCAATATTCAGAAGGC  150

seq1  TGCTTAGTTTTGGCAAGTCAGTCTTTATTACCTCCTTAGTGCTGCCTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAGTTTTGGCAAGTCAGTCTTTATTACCTCCTTAGTGCTGCCTCAG  200

seq1  ATTTGCTACAACACCAAAGGGATTTTCCTGGATATTTTCTCCCTTCAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTACAACACCAAAGGGATTTTCCTGGATATTTTCTCCCTTCAACA  250

seq1  GTTAACCCAAGATATGTAACAGTGAGCCACCATTGTAGTTTTGACAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACCCAAGATATGTAACAGTGAGCCACCATTGTAGTTTTGACAGAAG  300

seq1  A  301
      |
seq2  A  301


| Home | SequenceCutter | Blast | Download |