BAC Information

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BAC

Clone NameB6Ng01-216F11
Chromosome4 (Build37)
Map Location 91,572,692 - 91,711,503
singlet/doubletdoublet
Overlap gene4930577H14Rik
Upstream geneLOC664840, LOC664848, LOC100042274, Elavl2, LOC664864, LOC620016, LOC654475
Downstream geneLOC664886, 1700011H22Rik, LOC68280
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-216F11.bB6Ng01-216F11.g
ACCGA033057GA033058
length1,056719
definitionB6Ng01-216F11.b B6Ng01-216F11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,572,692 - 91,573,753)(91,710,784 - 91,711,503)
sequence
gaattcatgatggtcatagcgagcctttaaaaacccactaacaaaaagca
aaaagcaaatagtatgaaatgagattcggttatttcttctataaagagat
ttgtgctttggtctttttgttttctaaagtgtcatttacaggcaaaccaa
aactccacttccatttgacctgtatggctgtgggaagccgggtgactcac
tgctgatgggtggtgtcatgatgaatggcatctacctggatggagtcagt
gatcccaaactttataaagcccatgttgtattttaagaatgtatttgtct
gccccaaagaaagctgtgctcactggcaatcaaggactttttttgtattt
taaaagtcggttgtattaaattgtgcaacttgagctcaatcaagaattaa
tatattgtaaagctctttgcattaaatctccattatttgaagcctatttt
catacaataccctaaattatttttgaaagggaaaatgataaaaataacaa
acaaccccccaaaggaaagaaagatatttgaaatatgttgccctgaaaac
ctttcaagaacaatagatctgggcttgaatcttacagcttatgtggactt
gggcagaatacacaatgctctgaggccctctcactcactctggaaataca
tacaatattatttattccataaaagtttgatatgtcaaggcatgtttaag
tgccaaagcacgttgcaaaattaccatgtaaagtgtagttacattttccc
aggttgttttattttataatatatattgatgtaaaatagcccggaacatt
gctactgaagtgtggaaaatactgaggtgttataattcactgacgatgtt
tatcagtcatttcattctcttctctattaagaatttcacaggacacttgc
cttcctataggcatagataaaatctttcagagttcagatatactcgtgag
aatgcaaggtatgcatcagccccccctagtgctgaaggtactttgaactg
gaatatgtgccacataaccctattgtaaccccgggatagcaatacctaga
tgatat
gaattctatttgggtctttcagacgttttgaattctatatagcatttgtc
atgactactcattactttggtgttttcaaaatcaagaaatctcagttttg
ttttttttttaatgtgagtaatactatagaatgtgaggatagtttcagat
tattgtcagtctttaaacaacaataagctaagtctaaccttaaactcact
tctacttatattacaaagattaagaatattactagaaagtaatctactag
agaacggtttctttcctgtccttaaggctcttgctatttgcttccccttc
tttttaccctccattgtgtcattgaaaaactccaagaggaaaggtcttaa
cagatgcatctttgagagttttgaaaaaatttaactccttgataaacgaa
ttgtagtgagggttggaaactcggaacctgtatgaatatattttcaataa
taagacatgggtgagtgtgttttgaaaataaattgaaacaagaaatattt
ggaaaggtacatgaataatctcaggttacagagtagtagaaaaggagatg
agaaattaacttagatctccctgatagccaaacaaagaaaaagaaaaaga
aaaagaaaaagaaaaagaaaaagaaaagaaaaagaaaaagaaaaagaaaa
acaaaaacaaaaacaaaaacaaaaaagtgaagagaaaaggaaaggaaggg
gaggagaggagaggagagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_91572692_91573753
seq2: B6Ng01-216F11.b_43_1098

seq1  GAATTCAATGATGGTCATAGCAAGCCTTTAAAAACCCACTAACAAAAAGC  50
      |||||| |||||||||||||| ||||||||||||||||||||||||||||
seq2  GAATTC-ATGATGGTCATAGCGAGCCTTTAAAAACCCACTAACAAAAAGC  49

seq1  AAAAAGCAAATAGTATGAAATGAGATTCGGTTATTTCTTCTATAAAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGCAAATAGTATGAAATGAGATTCGGTTATTTCTTCTATAAAGAGA  99

seq1  TTTGTGCTTTGGTCTTTTTGTTTTCTAAAGTGTCATTTACAGGCAAACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGCTTTGGTCTTTTTGTTTTCTAAAGTGTCATTTACAGGCAAACCA  149

seq1  AAACTCCACTTCCATTTGACCTGTATGGCTGTGGGAAGCCGGGTGACTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCCACTTCCATTTGACCTGTATGGCTGTGGGAAGCCGGGTGACTCA  199

seq1  CTGCTGATGGGTGGTGTCATGATGAGTGGCATCTACATGGATGGAGTCAG  250
      ||||||||||||||||||||||||| |||||||||| |||||||||||||
seq2  CTGCTGATGGGTGGTGTCATGATGAATGGCATCTACCTGGATGGAGTCAG  249

seq1  TGATCCCAAACTTTATAAAGCCCATGTTGTATTTTAAGAATGTATTTGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCCAAACTTTATAAAGCCCATGTTGTATTTTAAGAATGTATTTGTC  299

seq1  TGCCCCAAAGAAAGCTGTGCTCAGTGGCAATCAAGGACTTTTTTTGTATT  350
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGCCCCAAAGAAAGCTGTGCTCACTGGCAATCAAGGACTTTTTTTGTATT  349

seq1  TTAAAAGTCGGTTGTATTAAATTGTGCAACTTGAGCTCAATCAAGAATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGTCGGTTGTATTAAATTGTGCAACTTGAGCTCAATCAAGAATTA  399

seq1  ATATATTGTAAAGCTCTTTGCATTAAATCTCCATTATTTGAAGCCTATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTGTAAAGCTCTTTGCATTAAATCTCCATTATTTGAAGCCTATTT  449

seq1  TCATACAATACCCTAAATTATTTTTGAAAGGGAAAATGATAAAAATAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACAATACCCTAAATTATTTTTGAAAGGGAAAATGATAAAAATAACA  499

seq1  AACAACCCCCCAAAGGAAAGAAAGATATTTGAAATATGTTGCCCTGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACCCCCCAAAGGAAAGAAAGATATTTGAAATATGTTGCCCTGAAAA  549

seq1  CCTTTCAAGAGCAATAGATCTGGGCTTGAATCTTACAGCTTATGTGGACT  600
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCAAGAACAATAGATCTGGGCTTGAATCTTACAGCTTATGTGGACT  599

seq1  TGGGCAGAATACACAATGCTCTGAGGCCCTCTCACTCACTCTGGAAATAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAGAATACACAATGCTCTGAGGCCCTCTCACTCACTCTGGAAATAC  649

seq1  ATACAATATTATTTATTCCATAAAAGTTTGATATGTCAAGGGATGTTTAA  700
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATACAATATTATTTATTCCATAAAAGTTTGATATGTCAAGGCATGTTTAA  699

seq1  GTGCCAAAGCAGGTTGCAAAATTAGCATGTAAAGTGTAGTTACATTTTCC  750
      ||||||||||| |||||||||||| |||||||||||||||||||||||||
seq2  GTGCCAAAGCACGTTGCAAAATTACCATGTAAAGTGTAGTTACATTTTCC  749

seq1  CAGGTTGTTTTATTTTATAATATATATTGATGTAAAATAGGCCAGGAACA  800
      ||||||||||||||||||||||||||||||||||||||| ||| ||||||
seq2  CAGGTTGTTTTATTTTATAATATATATTGATGTAAAATA-GCCCGGAACA  798

seq1  TTGCTACTGAAGTGTGGAAAATACTGATGTGTAAGAATTCAATAAAGATG  850
      ||||||||||||||||||||||||||| |||| | |||||| | | ||||
seq2  TTGCTACTGAAGTGTGGAAAATACTGAGGTGTTATAATTCACTGACGATG  848

seq1  TTTATCATTCATTTCATACTCTTCTCTATTAAGAATTTCACAAGACACTT  900
      ||||||| ||||||||| |||||||||||||||||||||||| |||||||
seq2  TTTATCAGTCATTTCATTCTCTTCTCTATTAAGAATTTCACAGGACACTT  898

seq1  -CCTTCCTAATAAGCATAGATTAAAATCATTTAAGAGTTTCAGATATATA  949
       ||||||| ||| ||||||| ||||||| ||| |||| ||||||||||  
seq2  GCCTTCCT-ATAGGCATAGA-TAAAATC-TTTCAGAG-TTCAGATATACT  944

seq1  GTTGAGAAATGCAAGGTATGCATCAGCCCACCCTAGTGCTGAAGGTACTT  999
        |||| |||||||||||||||||||||| ||||||||||||||||||||
seq2  CGTGAG-AATGCAAGGTATGCATCAGCCCCCCCTAGTGCTGAAGGTACTT  993

seq1  TGAACTGGAATATTGTG-CACATAACCATATTGTAACCCCGGGATAGC-A  1047
      |||||||||||| |||| ||||||||| |||||||||||||||||||| |
seq2  TGAACTGGAATA-TGTGCCACATAACCCTATTGTAACCCCGGGATAGCAA  1042

seq1  TAGCTAAGATGATAT  1062
      || || |||||||||
seq2  TACCT-AGATGATAT  1056

seq1: chr4_91710784_91711503
seq2: B6Ng01-216F11.g_65_783 (reverse)

seq1  CCTCTCCTCTCCTCTCCTCCCCTTCCTTTCCTTTTCTCTTCACTTTTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCTCTCCTCTCCTCCCCTTCCTTTCCTTTTCTCTTCACTTTTTTG  50

seq1  TTTTTGTTTTTGTTTTTGTTTTTCTTTTTCTTTTTCTTTTTCTTTTTCTT  100
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTTTTGTTTTTGTTTTTGTTTTTCTTTTTCTTTTTCTTTTTC-TTTTCTT  99

seq1  TTTCTTTTTCTTTTTCTTTTTCTTTTTCTTTTTCTTTGTTTGGCTATCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTTCTTTTTCTTTTTCTTTTTCTTTTTCTTTGTTTGGCTATCAG  149

seq1  GGAGATCTAAGTTAATTTCTCATCTCCTTTTCTACTACTCTGTAACCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATCTAAGTTAATTTCTCATCTCCTTTTCTACTACTCTGTAACCTGA  199

seq1  GATTATTCATGTACCTTTCCAAATATTTCTTGTTTCAATTTATTTTCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATTCATGTACCTTTCCAAATATTTCTTGTTTCAATTTATTTTCAAA  249

seq1  ACACACTCACCCATGTCTTATTATTGAAAATATATTCATACAGGTTCCGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACTCACCCATGTCTTATTATTGAAAATATATTCATACAGGTTCCGA  299

seq1  GTTTCCAACCCTCACTACAATTCGTTTATCAAGGAGTTAAATTTTTTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCAACCCTCACTACAATTCGTTTATCAAGGAGTTAAATTTTTTCAA  349

seq1  AACTCTCAAAGATGCATCTGTTAAGACCTTTCCTCTTGGAGTTTTTCAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTCAAAGATGCATCTGTTAAGACCTTTCCTCTTGGAGTTTTTCAAT  399

seq1  GACACAATGGAGGGTAAAAAGAAGGGGAAGCAAATAGCAAGAGCCTTAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAATGGAGGGTAAAAAGAAGGGGAAGCAAATAGCAAGAGCCTTAAG  449

seq1  GACAGGAAAGAAACCGTTCTCTAGTAGATTACTTTCTAGTAATATTCTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGAAAGAAACCGTTCTCTAGTAGATTACTTTCTAGTAATATTCTTA  499

seq1  ATCTTTGTAATATAAGTAGAAGTGAGTTTAAGGTTAGACTTAGCTTATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTGTAATATAAGTAGAAGTGAGTTTAAGGTTAGACTTAGCTTATTG  549

seq1  TTGTTTAAAGACTGACAATAATCTGAAACTATCCTCACATTCTATAGTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTAAAGACTGACAATAATCTGAAACTATCCTCACATTCTATAGTAT  599

seq1  TACTCACATTAAAAAAAAAACAAAACTGAGATTTCTTGATTTTGAAAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCACATTAAAAAAAAAACAAAACTGAGATTTCTTGATTTTGAAAACA  649

seq1  CCAAAGTAATGAGTAGTCATGACAAATGCTATATAGAATTCAAAACGTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGTAATGAGTAGTCATGACAAATGCTATATAGAATTCAAAACGTCT  699

seq1  GAAAGACCCAAATAGAATTC  720
      ||||||||||||||||||||
seq2  GAAAGACCCAAATAGAATTC  719