BAC Information

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BAC

Clone NameB6Ng01-219A23
Chromosome4 (Build37)
Map Location 143,936,437 - 143,937,137
singlet/doubletsinglet
Overlap genenone
Upstream geneLrrc38, LOC621961, Pramel1, 4732496O08Rik, Oog4, LOC666015, LOC626700, OTTMUSG00000010207, LOC100040854, LOC100040861, BC080695, LOC666049, LOC279185, LOC277668, LOC100040924, OTTMUSG00000010333, LOC277666, OTTMUSG00000010009, OTTMUSG00000010328, OTTMUSG00000010433, LOC195555, LOC194224, LOC626889, LOC329984, LOC626922, LOC626943, LOC100041127, LOC436146, Pramel4, LOC100041077, LOC100041144, Oog3, Oog2, C87977, Pramel5, LOC666150, LOC626995
Downstream geneOTTMUSG00000010537, EG627009, Pramef12, D530049N12Rik, 1700012P22Rik, Aadacl3, 9430007A20Rik, LOC100041232, LOC666194, LOC627085, LOC666215, LOC435815, Gm436, LOC546849, Gm438, LOC666242, LOC676844, Dhrs3, Vps13d, Tnfrsf1b, Tnfrsf8
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219A23.bB6Ng01-219A23.g
ACCGA035013GA035014
length1,163704
definitionB6Ng01-219A23.b B6Ng01-219A23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccataaattcactgtttttaattgctgagtagtactctattgtgt
aaatgtaccacattttctgtatccattcctctgttgagggacatctgggt
ttttacagcttctggctattataaataaggctgctattaacatagtgggg
catgtgttcttattaccagttggaacttcttctggatacgtattgctaga
tcttctggtagtactatttccaattttctgcagaaccgcaagactgattt
ccagataggtggtataagcttgcaatcctaccagcaatggaggagtgttc
ctctttctccacatcctcgccagcatctgctgtcacctgaatttttgatc
ttagccattctgacttgttgggagctattaagacaacactattgtcctga
tctctaaattgggcctctccccccgagaagaaaagggggtcaaaagcagg
ccaccgacacaccggtccgagaacaaccacagaatgttccagccctaagt
cagcgccagatgtcctgacgacaccctgataccaagttcttgcttcccct
tgtagctgccaaaagaaaaatttccactgccccacccctcctgctgagaa
gtaattgtacttccccttttgcttgtgcatttaagccttgagcctttcta
aatacagtgacaccttgatgcttctcagactgtttacgtgtcttttcttg
cacttggtgtccatccttttcttccccctcatttggttcttaggagaagg
tcccctcgagaccctcgaaaaactggacctgctggatgggtcactgactg
gtgtgaggtagaatctcaaggttgttttgatttgcatttccctgatgatt
aaggatgttgaacattttttcaggtgcttctcacccattccataatcctc
agttgagaattcttgtttagctctgtaccccaatttttaatggggttttt
gatttttggagtccaccttcttgagtctttatatatattggatattagtc
ccctgtctaatttaggattggtaagatccttttccctgttctgatgatgg
ccctttttgccttattgacagagttccttttgcttaacacaaagcttggc
aattttaccgaggttcctattggtcaatcttccactctatagcgaaagcc
attgctggttcta

gaattcatgttgatgtgatcttagaataattatctagtagtcttttggct
gctctagcattctgatttgtcacctgagtaaacaaactcagactatcatg
gatgtgcccatgatttaggaaagctttgtgctagggacccaataaaggga
aaacctatctacagaggctgtgagaacttacaccataccttgcctcgtgc
catctctgtcctcaattctgtctgaacagtttcaatctgcctctaagtct
ccatgagtcaaagtctctttcagcatagggggggttgagtagactgaaaa
tgagtgacagtgattaaggatacaggggagccctgtgaacatgacagtct
atgtatgctatgaagataggattcagtgagcccagggttggaacagtgtc
ttagggttttactgctgtcaacagacaccatgaccaagacaactctttta
aggacaacatgtaattgggggtggcttacaggttcagaggtttagtccat
tatcatcaaggcaggaacatggcagcatctaggaaggcatggtttaggca
gagtggagaggttttgttgttgttcttcttcttgttttgggttttttgtt
ttgttttgttttgctttgttgctttttgggggacagggtttctctgtgta
gccctggctgtactggaacttcacttttgtagaccaggttggcctctaaa
ctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_143936437_143937137
seq2: B6Ng01-219A23.g_70_773 (reverse)

seq1  TGAG-TTCGAGGCCAGCCTGGTCTAC-AAAGTG-AGTTCCAGTACAGCCA  47
      |||| || ||||||| |||||||||| |||||| ||||||||||||||||
seq2  TGAGTTTAGAGGCCAACCTGGTCTACAAAAGTGAAGTTCCAGTACAGCCA  50

seq1  GGGCTACACAGAGAAACCCTGTCCCCCAAAAAGCAACAAAGCAAAACAAA  97
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTACACAGAGAAACCCTGTCCCCCAAAAAGCAACAAAGCAAAACAAA  100

seq1  ACAAAACAAAAAACCCAAAACAAGAAGAAGAACAACAACAAAACCTCTCC  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACAAAAAACCCAAAACAAGAAGAAGAACAACAACAAAACCTCTCC  150

seq1  ACTCTGCCTAAACCATGCCTTCCTAGATGCTGCCATGTTCCTGCCTTGAT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGCCTAAACCATGCCTTCCTAGATGCTGCCATGTTCCTGCCTTGAT  200

seq1  GATAATGGACTAAACCTCTGAACCTGTAAGCCACCCCCAATTACATGTTG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATGGACTAAACCTCTGAACCTGTAAGCCACCCCCAATTACATGTTG  250

seq1  TCCTTAAAAGAGTTGTCTTGGTCATGGTGTCTGTTGACAGCAGTAAAACC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAAAAGAGTTGTCTTGGTCATGGTGTCTGTTGACAGCAGTAAAACC  300

seq1  CTAAGACACTGTTCCAACCCTGGGCTCACTGAATCCTATCTTCATAGCAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGACACTGTTCCAACCCTGGGCTCACTGAATCCTATCTTCATAGCAT  350

seq1  ACATAGACTGTCATGTTCACAGGGCTCCCCTGTATCCTTAATCACTGTCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGACTGTCATGTTCACAGGGCTCCCCTGTATCCTTAATCACTGTCA  400

seq1  CTCATTTTCAGTCTACTCAACCCCCCCTATGCTGAAAGAGACTTTGACTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTTCAGTCTACTCAACCCCCCCTATGCTGAAAGAGACTTTGACTC  450

seq1  ATGGAGACTTAGAGGCAGATTGAAACTGTTCAGACAGAATTGAGGACAGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGACTTAGAGGCAGATTGAAACTGTTCAGACAGAATTGAGGACAGA  500

seq1  GATGGCACGAGGCAAGGTATGGTGTAAGTTCTCACAGCCTCTGTAGATAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCACGAGGCAAGGTATGGTGTAAGTTCTCACAGCCTCTGTAGATAG  550

seq1  GTTTTCCCTTTATTGGGTCCCTAGCACAAAGCTTTCCTAAATCATGGGCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCCCTTTATTGGGTCCCTAGCACAAAGCTTTCCTAAATCATGGGCA  600

seq1  CATCCATGATAGTCTGAGTTTGTTTACTCAGGTGACAAATCAGAATGCTA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCATGATAGTCTGAGTTTGTTTACTCAGGTGACAAATCAGAATGCTA  650

seq1  GAGCAGCCAAAAGACTACTAGATAATTATTCTAAGATCACATCAACATGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGCCAAAAGACTACTAGATAATTATTCTAAGATCACATCAACATGA  700

seq1  ATTC  701
      ||||
seq2  ATTC  704


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