BAC Information

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BAC

Clone NameB6Ng01-220I06
Chromosome4 (Build37)
Map Location 70,965,358 - 70,966,477
singlet/doubletsinglet
Overlap genenone
Upstream geneCdk5rap2, Megf9, LOC100039565
Downstream geneLOC100039979, LOC667638, EG667649, Tle1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-220I06.bB6Ng01-220I06.g
ACCGA036054GA036055
length1,105774
definitionB6Ng01-220I06.b B6Ng01-220I06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatttagagaaaaatgtcaagaacataaaaaactcaattactaag
tgattacacacctgaaccttcatagtctcaaagaaatcctacattacacg
agagaacattctttttcaacatgtgtatgtgtttctgaaaaggtttacac
attctgacagtgacattacataattattgatacttagcaatgaataattt
cacacaaaatgtaagcgtaataacaataataaagaaaatagaccgtactg
taattttctaatggtttaacaagaacgtgatactggttggtgttgggaga
tgctcatgagttgcttatgaaagccagcttcctgttttcattaccttggt
tgttagagacactgaacaatagaaacattgtaataaattggaactaaaat
cttaaatgtccttcacattttcaggtttcaaatgcatggggctccaactt
ttggcactatcttagtggctgtggagtatttaggagaatgaggttaggag
atataagtcactagggtgaacctttgaagaccatagctgttcctggtact
ggtacttccctaaggctgagttcctgattggctgtcataactttatatca
gacctgttctccaccatgtcttccttgccataatagatgcaaatatctct
gaaaccatgagccaaaataaattttactacttttacatagttttttgttt
gtttgttttttgtacttaggtttcagcaacaggaaattacctaagagttg
ggaagaatatatctctctacatgtgcacatattatgtgcatttctctaac
aggatatatagtttggaaaatagagaagtttttttgagagttatggaact
attattgtctttctaaattaatgctgaagtttaatttccaaggcaatagt
atgatatgggaactccccatggtagttaggtcctcgttcctaaataggat
taaggtattatgaacaagagccatttccagttggatcctctctttgcaca
tgtctttctgcatgggagaaacctaagggattaattatgcaagtagtctt
gcactgtcacacttgccatatttatactcacattattagattatgaaagt
aagtt

gaattctcagagatagagagtacacatggtcaaactggcccacattagat
gcatttttctaacaactgggagttatactcaattagagttttatattatt
cttcaccattaaaaaaacagttgtaatttagcttctatcttttttttttc
tttccattttttattaggtatttagctcatttacatttccaatgctatac
caaaagtcccccatacccacccacccccactcccctacccgcccactccc
cctttttggccctggcgttcccctgttctggggcatataaagtttgtatg
tccaatgggcctctccagtgatggccgactaggccatcttttgatatata
tgcagctagagtcaagagctccggggtactggttagttcataatgttgat
ccacctatagggttgcagatccctttagctccttgggtactttctctagc
tcctccattgggagccctgtgatctatccattagctgactgtgagcatcc
acttctgtgtttgctaggccccggcatagtctcacaagagacagctacat
ctgggtcctttcgataaaatcttgctagtgtatgcaatggtgtcagcgtt
tggatgctgattatggggtagatccctggatatggcagtctctacatggt
ccatcctttcatctcagctccaaactttgtctctgtaactccttccaagg
gtgttttgttcccacttctaaggaggggcatagtgtccacacttcagtct
tcatttttcttgagtttcatgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_70965358_70966477
seq2: B6Ng01-220I06.b_44_1148

seq1  GAATTCATTTAGAGAAAAATGTCAAGAACATAAAAAACTCAATTACTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTAGAGAAAAATGTCAAGAACATAAAAAACTCAATTACTAAG  50

seq1  TGATTACACACCTGAACCTTCATAGTCTCAAAGAAATCCTACATTACACG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTACACACCTGAACCTTCATAGTCTCAAAGAAATCCTACATTACACG  100

seq1  AGAGAACATTCTTTTTCAACATGTGTATGTGTTTCTGAAAAGGTTTACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAACATTCTTTTTCAACATGTGTATGTGTTTCTGAAAAGGTTTACAC  150

seq1  ATTCTGACAGTGACATTACATAATTATTGATACTTAGCAATGAATAATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGACAGTGACATTACATAATTATTGATACTTAGCAATGAATAATTT  200

seq1  CACACAAAATGTAAGCGTAATAACAATAATAAAGAAAATAGACCGTACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAAAATGTAAGCGTAATAACAATAATAAAGAAAATAGACCGTACTG  250

seq1  TAATTTTCTAATGGTTTAACAAGAACGTGATACTGGTTGGTGTTGGGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTCTAATGGTTTAACAAGAACGTGATACTGGTTGGTGTTGGGAGA  300

seq1  TGCTCATGAGTTGCTTATGAAAGCCAGCTTCCTGTTTTCATTACCTTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCATGAGTTGCTTATGAAAGCCAGCTTCCTGTTTTCATTACCTTGGT  350

seq1  TGTTAGAGACACTGAACAATAGAAACATTGTAATAAATTGGAACTAAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGAGACACTGAACAATAGAAACATTGTAATAAATTGGAACTAAAAT  400

seq1  CTTAAATGTCCTTCACATTTTCAGGTTTCAAATGCATGGGGCTCCAACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAATGTCCTTCACATTTTCAGGTTTCAAATGCATGGGGCTCCAACTT  450

seq1  TTGGCACTATCTTAGTGGCTGTGGAGTATTTAGGAGAATGAGGTTAGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCACTATCTTAGTGGCTGTGGAGTATTTAGGAGAATGAGGTTAGGAG  500

seq1  ATATAAGTCACTAGGGTGAACCTTTGAAGACCATAGCTGTTCCTGGTACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGTCACTAGGGTGAACCTTTGAAGACCATAGCTGTTCCTGGTACT  550

seq1  GGTACTTCCCTAAGGCTGAGTTCCTGATTGGCTGTCATAACTTTATATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTTCCCTAAGGCTGAGTTCCTGATTGGCTGTCATAACTTTATATCA  600

seq1  GACCTGTTCTCCACCATGTCTTCCTTGCCATAATAGATGCAAATATCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGTTCTCCACCATGTCTTCCTTGCCATAATAGATGCAAATATCTCT  650

seq1  GAAACCATGAGCCAAAATAAATTTTACTACTTTTACATAGTTTTTTGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCATGAGCCAAAATAAATTTTACTACTTTTACATAGTTTTTTGTTT  700

seq1  GTTTGTTTTTTGTACTTAGGTTTCAGCAACAGGAAATTACCTAAGAGTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTTTTGTACTTAGGTTTCAGCAACAGGAAATTACCTAAGAGTTG  750

seq1  GGAAGAATATATCTCTCTACATGTGCACATATTATGTGCATTTCTCTAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAATATATCTCTCTACATGTGCACATATTATGTGCATTTCTCTAAC  800

seq1  AGGATATATAGTTTGGAAAATAGAGAAGTTTTTTTGAGAGTTATGGAACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATATATAGTTTGGAAAATAGAGAAGTTTTTTTGAGAGTTATGGAACT  850

seq1  ATTATTGTCTTTCTAAAATTAATGCTGAAGTTTAATTTCCAAGGCAATAG  900
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATTATTGTCTTTCT-AAATTAATGCTGAAGTTTAATTTCCAAGGCAATAG  899

seq1  TATGATATGGGAACTCCCCATGGTAGTTAGGTCCTCGTTCCTAAATAGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATATGGGAACTCCCCATGGTAGTTAGGTCCTCGTTCCTAAATAGGA  949

seq1  TTAAGGTATTTATGAAACAAGAGCCATTTCCAGTTTGGATCCTCTCTTTG  1000
      |||||||| ||||| |||||||||||||||||| ||||||||||||||||
seq2  TTAAGGTA-TTATG-AACAAGAGCCATTTCCAG-TTGGATCCTCTCTTTG  996

seq1  CCACATGTCTTTTCTGCAATGGGAAGAAACCTAAGGGATTTAATTATGCA  1050
       |||||||| ||||||| ||||| |||||||||||||| |||||||||| 
seq2  -CACATGTC-TTTCTGC-ATGGG-AGAAACCTAAGGGA-TTAATTATGC-  1040

seq1  AAGTAGTCTTGCACTGTTAAACACTTGCCATAATTTATACTTCACATAAA  1100
      |||||||||||||||||   ||||||||||| |||||||| |||||| | 
seq2  AAGTAGTCTTGCACTGT--CACACTTGCCAT-ATTTATAC-TCACATTA-  1085

seq1  TTTAGAATTATGAAA--AAGTT  1120
       |||| |||||||||  |||||
seq2  -TTAG-ATTATGAAAGTAAGTT  1105


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