BAC Information

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BAC

Clone NameB6Ng01-221C14
Chromosome4 (Build37)
Map Location 15,640,980 - 15,642,133
singlet/doubletsinglet
Overlap geneLOC100040095
Upstream gene1700034K16Rik, Otud6b, LOC100040047, Tmem55a, OTTMUSG00000004551, Efcbp1, Tmem64
Downstream geneLOC633695, Calb1, Decr1, Nbn, Osgin2, Ripk2, LOC667150, LOC383994
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-221C14.bB6Ng01-221C14.g
ACCGA036526GA036527
length1,1581,052
definitionB6Ng01-221C14.b B6Ng01-221C14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgcctggggcacacgccagggctcacgttctcatccaaccttt
gctgcttgacttatttcgacataacgttgagctctttccaaagagcaggt
gcttgcgcggccatcagttcaccaataagggctgacctacagatgtcgga
aagggctcgtttcagcaaaagtcggaaaacagaagcattttttatgctaa
atttaaagctgcccttgctgtttgtaactgcaatgccaaaagtaaaaaac
ttgaaagctcatattgaattaagattcgaacagggaaggggagcagagaa
caccttctatttttttcttttcaaaataaataattattttcttttaacgg
tagaaggaaatgttttatgctccagtctctctgactgcttgaccttcatg
ttaggactctgataatcatcttactgctgcagaacaatggaatgtacaag
ttacaaagtgtattccccagactggtaagactcccagcagaaacactgag
taaccatagtgaaagaggtttgagtaaaaacgaatggaaagtcacaggag
atttagaaagtatgaaggaaagggactgtagactgaatcctttcattaat
atttcaatcattttccttttgatctcggaaagtaatgccattcagaaacg
cctaccttttcctcccatttataaacctctgagagtgtgatagacaagca
ctgaggacccgtgatcctcatgatatcagcgttgtggtcccctggtttac
actacaagaaatattcctgatgtataagcaactatcccaaggttgtacag
aaatccatgctgacctaacaaatatgatctcagagtcaccatgaacttct
tcttttagcctcaggtaccctcaaactcactcagagtgggggagtcaagc
agcttaagattgtttattgtaagacctgatttaacctttcaactatagct
tccatcctccggagaactgactcttgtctcaagttacacactctcctcat
tgcttcttcacttttctcactacacaaaaatgtgtgatgaggtaatagaa
acttctactaatcttcttgtttattagttcacacgggaaaaatgtatata
cgagtgttaaaaataggtatatgtgttatgggggttaccttaacagagac
tgcaaccc
gaattcagagcataccaagtgtggatagaattaaaaaaaaatggtgtgtg
gattaagatggtctatccgtgaagtcattcatcaactgtttcaatgaaca
atggttctgcttggagggcagcacagaccttaggtgagggtaagattctg
gttcattggctgtgatgattttgaaaaacattcatctcagaataagagta
acttataaagtcctcttcttcaaaattgatacaataatttaaaatatcta
gcaaagcctcactctttgctgttctcttacaagccacctcccaaattaat
tgtctccatttcttttggctgtataaatacttttgaaatatgtaagctat
tgtaaaaatggctatcttgccaaaagcaatctacagattcaatgcaatcc
ccatcaaaattccaactcaattcttcaatgatttagaaagagcaatctgc
aaattcatctggaataacaaaaaacctaggatagcaaaaactcttctcaa
ggataaaagtacctctggtggaatcaccatgcctgacctaaagctttact
acagagcaattgtgataaaaactgcatggtactggtatagtgacagacaa
gtagagcaatggaatagaattgaagacccagaaatgaacccacacaacta
tggtcacttgatttttgacaagggagctaaaatcatccagtggaaaaaag
acagcattttcaacaaatggtgctggcacaactggcagttatcatgtaga
agaatgcgaattgattcattcctatctccttgtactaaggtcaaatctaa
gtggattaaggaactccacataaaaccagagacactaaaacttatagagg
agaaagtagggaaaagccttggagatatgggcacagagggaaatttcctg
aatagaacagcatggccttgtgctgtaagatcgaggattgacaaattggg
acctcatgaaactgcaaagccttctgcaggcaaaagacaccgtcattaga
caaaaagaccaccaacagattgggaaggattctttacctagctaattcag
at
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_15640980_15642133
seq2: B6Ng01-221C14.b_44_1201

seq1  GAATTCCTGCCTGGGGCACACGCCAGGGCTCACGTTCTCATCCAACCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCCTGGGGCACACGCCAGGGCTCACGTTCTCATCCAACCTTT  50

seq1  GCTGCTTGACTTATTTCGACATAACGTTGAGCTCTTTCCAAAGAGCAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTTGACTTATTTCGACATAACGTTGAGCTCTTTCCAAAGAGCAGGT  100

seq1  GCTTGCGCGGCCATCAGTTCACCAATAAGGGCTGACCTACAGATGTCGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCGCGGCCATCAGTTCACCAATAAGGGCTGACCTACAGATGTCGGA  150

seq1  AAGGGCTCGTTTCAGCAAAAGTCGGAAAACAGAAGCATTTTTTATGCTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCTCGTTTCAGCAAAAGTCGGAAAACAGAAGCATTTTTTATGCTAA  200

seq1  ATTTAAAGCTGCCCTTGCTGTTTGTAACTGCAATGCCAAAAGTAAAAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAGCTGCCCTTGCTGTTTGTAACTGCAATGCCAAAAGTAAAAAAC  250

seq1  TTGAAAGCTCATATTGAATTAAGATTCGAACAGGGAAGGGGAGCAGAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGCTCATATTGAATTAAGATTCGAACAGGGAAGGGGAGCAGAGAA  300

seq1  CACCTTCTATTTTTTTCTTTTCAAAATAAATAATTATTTTCTTTTAACGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTCTATTTTTTTCTTTTCAAAATAAATAATTATTTTCTTTTAACGG  350

seq1  TAGAAGGAAATGTTTTATGCTCCAGTCTCTCTGACTGCTTGACCTTCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGGAAATGTTTTATGCTCCAGTCTCTCTGACTGCTTGACCTTCATG  400

seq1  TTAGGACTCTGATAATCATCTTACTGCTGCAGAACAATGGAATGTACAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGACTCTGATAATCATCTTACTGCTGCAGAACAATGGAATGTACAAG  450

seq1  TTACAAAGTGTATTCCCCAGACTGGTAAGACTCCCAGCAGAAACACTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAAGTGTATTCCCCAGACTGGTAAGACTCCCAGCAGAAACACTGAG  500

seq1  TAACCATAGTGAAAGAGGTTTGAGTAAAAACGAATGGAAAGTCACAGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCATAGTGAAAGAGGTTTGAGTAAAAACGAATGGAAAGTCACAGGAG  550

seq1  ATTTAGAAAGTATGAAGGAAAGGGACTGTAGACTGAATCCTTTCATTAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGAAAGTATGAAGGAAAGGGACTGTAGACTGAATCCTTTCATTAAT  600

seq1  ATTTCAATCATTTTCCTTTTGATCTCGGAAAGTAATGCCATTCAGAAACG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAATCATTTTCCTTTTGATCTCGGAAAGTAATGCCATTCAGAAACG  650

seq1  CCTACCTTTTCCTCCCATTTATAAACCTCTGAGAGTGTGATAGACAAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCTTTTCCTCCCATTTATAAACCTCTGAGAGTGTGATAGACAAGCA  700

seq1  CTGAGGACCCGTGATCCTCATGATATCAGCGTTGTGGTCCCCTGGTTTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGACCCGTGATCCTCATGATATCAGCGTTGTGGTCCCCTGGTTTAC  750

seq1  ACTACAAGAAATATTCCTGATGTATAAGCAACTATCCCAAGGTTGTACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAAGAAATATTCCTGATGTATAAGCAACTATCCCAAGGTTGTACAG  800

seq1  AAATCCATGCTGACCTAACAAATATGATCTCAGAGTCACCATGAACTTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCATGCTGACCTAACAAATATGATCTCAGAGTCACCATGAACTTCT  850

seq1  TCTTTTAGCCTCAGGTACCCTCAAACTCACTCAGAGTGGGGGAGTCAAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTAGCCTCAGGTACCCTCAAACTCACTCAGAGTGGGGGAGTCAAGC  900

seq1  AGCTTAAGATTGTTTATTGTAAGACCTGATTTAACC-TTCAACTATAGCT  949
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGCTTAAGATTGTTTATTGTAAGACCTGATTTAACCTTTCAACTATAGCT  950

seq1  TCCATCCTCCGGAGAACTGACTCTTGTCTCAAGTTACACACTCTCCTCAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCTCCGGAGAACTGACTCTTGTCTCAAGTTACACACTCTCCTCAT  1000

seq1  TGCTTCTTCACTTTTCTCACTACAACAAAAAATGTGTGATGAGGTAATAG  1049
      ||||||||||||||||||||||||   |||||||||||||||||||||||
seq2  TGCTTCTTCACTTTTCTCACTACA--CAAAAATGTGTGATGAGGTAATAG  1048

seq1  AAACTTCTAACTAATCTTC-TGTT--ATAGTCACCACGGAAAAAATGGTA  1096
      |||||||| |||||||||| ||||   ||||   ||||| |||||| |||
seq2  AAACTTCT-ACTAATCTTCTTGTTTATTAGTTCACACGGGAAAAAT-GTA  1096

seq1  TATACGAGTGTAAAAAAAAGTAATATGTG-TATGGGGG-TACCT--ACAG  1142
      ||||||||||| ||||| ||  ||||||| |||||||| |||||  ||||
seq2  TATACGAGTGTTAAAAATAGGTATATGTGTTATGGGGGTTACCTTAACAG  1146

seq1  AGACTGCAACCC  1154
      ||||||||||||
seq2  AGACTGCAACCC  1158