BAC Information

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BAC

Clone NameB6Ng01-221J14
Chromosome4 (Build37)
Map Location 30,012,200 - 30,012,818
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040907, LOC100040811
Downstream geneLOC665185, LOC619906, LOC100040864
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-221J14.bB6Ng01-221J14.g
ACCGA036849GA036850
length1,165622
definitionB6Ng01-221J14.b B6Ng01-221J14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaggccaggcagtggtggcatatgcctttaatcccagcacatgg
gaggcagaggcaggtggatttctgaggtcgaggccagcctggtctacaga
gtgaatgtgagttctaggacagccagagctatacagagaaaccctgtctc
aaataaacaacaacaactagacaaacaaataaacaaaatcccttaaagat
agccaagaaagcaaaagcaagacacaacaaaacaaacaaacaagcagcaa
gtgaagaaagagaataataccagaaaagtgaactagaagcaataaaggaa
acaatctgagggaagcataaggatggatggcaaggaccagccccagatta
gagaagggtcctgaggaagggtgtttgacagctgtgaatggacaacgcaa
gaatctctgatggatgcaagctgacagctcagcactcctggagataacac
tctcttgcagaccaaaacccagactttcattttccataaactacttcatt
agaaattacatatcaattcaatcatttaacccaggttcccttttcattat
aacatgagtcagtattttgtgacccattagccactggctaaagctgcttg
ctggagctggaccatagctcccttgttctattgcattatcaccagttttt
tgctttccaactctttcactgtctacacatgaatgtcctagaacacatgt
gactgtcctggaacttgctctgtagacagacctttgaactcaagagattt
gtatgtctgttccttttaatgctgagatgaatgtcctgtacagaatcttt
tctttaactctctgtctcaggctggccttgaactcagaaaactgcttgcc
ttgtcttctgtgctgaatggtatgtaccaccatgcaggcccctaagcttt
tgcatgaccattattccccaagatcaggatcaaaaaccttttgtcttccc
acctgaagggtctagatcaccaaatgtgtcctccatttctggattgtagt
taattcctagacttaaagtaaaaacgattcctttcaatgttaacagaaac
cacctagcttagtggtgtgtgggtagatctctcctgagatcaccatctca
atcttctgcttcctcatctcagtactttttgaatgactggacctattaac
tctccgatgctctca
gaattcaatatctgtgtcatgtatatatcaaatggatttcaccatcatgg
ctaaaacatttatgcttctcagtatttttttgaatgagaccactttttga
tatttacgcagtcttgtattcacctttgaagttactacattctatgacct
tattttcagcactgaggaggctcagaggcctttcaggatgtgatcataag
ctctggatcttgataaaaaaaatgcacttgaaattgcctgaaacactgta
tagtgtcttccccacaattaagagttaatagaggtgaaatgacttccaat
gttatgtttttacataatccctgagtgtgtcagcaagaggatatctgtgt
taatgtattttcttgggtttttattttcctgtttctttcttttattcaat
tcctatgtgttaatttttgttttactttattatattttactactattacc
taggagattgcttattttctaatgagagaaagaaaaggggtggttcagat
ggaaggggaaatggggaggaactagttggaatggaggaaggtaagacaat
tatcaggatagactattttacggttaaaaaatctatttttcttaatagaa
aaatttgttctgaatctctttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_30012200_30012818
seq2: B6Ng01-221J14.g_67_688 (reverse)

seq1  CAAAGAGTTTCAGAAC-AATTTTTCTTTTATG-AAAATAGATTTTTTAAC  48
      ||||||| |||||||| ||||||||| ||| | |||||||||||||||||
seq2  CAAAGAGATTCAGAACAAATTTTTCTATTAAGAAAAATAGATTTTTTAAC  50

seq1  CGT-AAATAGTCTATCCTGATAATTGTCTTACCTTCCTCCATTCCAACTA  97
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAAAATAGTCTATCCTGATAATTGTCTTACCTTCCTCCATTCCAACTA  100

seq1  GTTCCTCCCCATTTCCCCTTCCATCTGAACCACCCCTTTTCTTTCTCTCA  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTCCCCATTTCCCCTTCCATCTGAACCACCCCTTTTCTTTCTCTCA  150

seq1  TTAGAAAATAAGCAATCTCCTAGGTAATAGTAGTAAAATATAATAAAGTA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAAATAAGCAATCTCCTAGGTAATAGTAGTAAAATATAATAAAGTA  200

seq1  AAACAAAAATTAACACATAGGAATTGAATAAAAGAAAGAAACAGGAAAAT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAATTAACACATAGGAATTGAATAAAAGAAAGAAACAGGAAAAT  250

seq1  AAAAACCCAAGAAAATACATTAACACAGATATCCTCTTGCTGACACACTC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCCAAGAAAATACATTAACACAGATATCCTCTTGCTGACACACTC  300

seq1  AGGGATTATGTAAAAACATAACATTGGAAGTCATTTCACCTCTATTAACT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATTATGTAAAAACATAACATTGGAAGTCATTTCACCTCTATTAACT  350

seq1  CTTAATTGTGGGGAAGACACTATACAGTGTTTCAGGCAATTTCAAGTGCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATTGTGGGGAAGACACTATACAGTGTTTCAGGCAATTTCAAGTGCA  400

seq1  TTTTTTTTATCAAGATCCAGAGCTTATGATCACATCCTGAAAGGCCTCTG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTATCAAGATCCAGAGCTTATGATCACATCCTGAAAGGCCTCTG  450

seq1  AGCCTCCTCAGTGCTGAAAATAAGGTCATAGAATGTAGTAACTTCAAAGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCCTCAGTGCTGAAAATAAGGTCATAGAATGTAGTAACTTCAAAGG  500

seq1  TGAATACAAGACTGCGTAAATATCAAAAAGTGGTCTCATTCAAAAAAATA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATACAAGACTGCGTAAATATCAAAAAGTGGTCTCATTCAAAAAAATA  550

seq1  CTGAGAAGCATAAATGTTTTAGCCATGATGGTGAAATCCATTTGATATAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAAGCATAAATGTTTTAGCCATGATGGTGAAATCCATTTGATATAT  600

seq1  ACATGACACAGATATTGAATTC  619
      ||||||||||||||||||||||
seq2  ACATGACACAGATATTGAATTC  622