BAC Information

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BAC

Clone NameB6Ng01-222E18
Chromosome4 (Build37)
Map Location 147,095,906 - 147,097,108
singlet/doubletsinglet
Overlap genenone
Upstream geneOTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100
Downstream geneLOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1, Frap1, Angptl7, Exosc10, LOC100043151, Srm, Masp2, Tardbp, Gm572, LOC100041733
LinkOpen Mouse BAC browser

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BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222E18.bB6Ng01-222E18.g
ACCGA037354GA037355
length1,2251,193
definitionB6Ng01-222E18.b B6Ng01-222E18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcccctgtatgagttctctgatgccttctcagattgactttctc
agtaaagctttgtcacattcactacatttgtaaggtttctctcctgtatg
aattctctgatgaattatcagactgcatttttgaataaaacatttgtcac
attcactacatttgtaaggtttctctcctgtatgaaatctctgatgaatc
ctcaaactggattttttagtaaagcatttgtcacattcactacatttgta
aggtttctctcctgtatgaattctctgatgaattctcagacagccatttt
cagtaaaggatttgtcacattcactacatttgtaaggtttctcttctgta
tgaattatctgatgaatactaagatgtgattttcaggtaaagcatttgtc
acattcattacatttgtaaggtttctctcctgtatgaattctctgatgaa
ttctcagacagccattttcagtaaaggatttgtcacattcattacatttg
taaggtttctctcctgtatgaattatctgatgaatactaagatgtgattt
tcaggtaaagcatttgtcacattcattacatttgtaaggtgtctctcctg
tatgaattctctgatgccttctcagactgtgtttgtcactaaagcatttg
tcgcattcattgcatttgtaaggttctctcctgaatgaattttctgatga
atactaagatggcattgttgggtaaagcatttgtcacattcactgcattt
gtacagtttctctcctgtatgaattctctgatgaatactaagatgtgatt
ttcgggtaaagcatttgtcacattcactgcatttataaggtttctctcct
gtatgaattctctgatgccttctcagactgtttttctcagtaaaacattt
gtcacattcactacatttgtaaggtttctctcctgcatgaattctatgat
gaactctcagagagcctttgtgagtaaagcatttgtcacatttcactaca
tttgtaagtttctctcctgcatgaatctatgatgaactctcagatagcct
ttgtcagtaagcattgtcgcattcactacatttgtaagtttctcttcctg
catgattctattgatgaactctaggactggcttgtccagttagccagttg
tccacctcactgccatggtacgtttctccgtatagagtctctctgagagt
agaactcatctcctgaaacactgtc

gaattcttctgtttacagatgatgaaactgaggggtaaagctgatcttgg
tggtgcacgtctttaatcccagtgctcaggtggagggtgcatctttgagt
tcaaggccagcctggtatacagggtgaattcctggacagtcaggactaca
cagagaaatcatgtctcaaaaaacaaacgtttttatttatgtgtgatgtt
tctttgcatataagtcagtgtaccatatgcgtgcctgggactcacagagg
ctgaaagagagcatcagttccctaggaactgcagtcatagttggtggtca
tgagccactatgtgtgtacctgcgaacaacctttggttccctgaagagca
gccagtgctcttaaccaccaagccatctatccagatcctagttcttctct
ttaaaatgtggctggcaaaaagcatccttgcttcaagtggtggagaatta
aatacaactttttatttctaaagcatttggaaaagtgcctggcctttctt
cttgatgctaaggagcaaatgcagtattagctgtgaggtgggttctgatc
actgcatactgtacacagctggtggtttgtaaatcaaagctgggggcagt
gaccccagaatcctggaccacagtcattctttgcttcctttgtgtttcaa
gagagggtctcatgtagctcaggctggtcttcctcaaactgactatgtca
cagaggatgtgcctgactctttaatccttcggcttccacctcacaaattc
tgaggggactaaaagcgtgtaccatctcaacatgtgacatgggtctgagc
tctgaatgcaaggtttgtggtaccaggctagcacattcccagcctgagtt
actactttccttttaaacatttttcttattttattgaaaacatattattt
ttttgtataagggtgttttcgcctacatgtgtatctgtgctccatcacat
acatgcctggtgcccacagaggtcagagaggacattgtacttcctggaat
tggagtttcagttctgatccaccatggtggagtcctgggaattcaaccct
gctccacaagttgcagcagagtgtttttaattactggagctgcctcccag
cctctaaattcactccttattgcagggatgttattgactggcacaatatc
cttggcaacctcacttaaactgtgatatatagctctttaaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_147095906_147097108
seq2: B6Ng01-222E18.g_66_1258 (reverse)

seq1  CATTT--AGAGC--TATATCACAGTTTTAGTGAGGTTGCCAAGGATATGT  46
      |||||  |||||  ||||||||||||| ||||||||||||||||||||  
seq2  CATTTAAAGAGCTATATATCACAGTTTAAGTGAGGTTGCCAAGGATATTG  50

seq1  TGCCAGTTTATATACATTCCTGCATATTAAGAAGTG-ATTTAGAGGCTTG  95
      |||||||  ||| |||| |||||  | |||| |||| |||||||||||  
seq2  TGCCAGTCAATA-ACATCCCTGC--AATAAGGAGTGAATTTAGAGGCT--  95

seq1  GGGAGGCAGCT-CGGTAATTAAAAACACTCTGCTGC-ACTTGTGGAGCAG  143
      ||||||||||| | |||||||||||||||||||||| |||||||||||||
seq2  GGGAGGCAGCTCCAGTAATTAAAAACACTCTGCTGCAACTTGTGGAGCAG  145

seq1  GGTTGAATTCCCAGGACTC--ACATGGTGGATCAGAACTGAAACTCCAAT  191
      |||||||||||||||||||   ||||||||||||||||||||||||||||
seq2  GGTTGAATTCCCAGGACTCCACCATGGTGGATCAGAACTGAAACTCCAAT  195

seq1  TCCAGGAAGTACAATGTCCTCTTCTGACCTCTGTGGGCACCAGGCATGTA  241
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TCCAGGAAGTACAATGTCCTC-TCTGACCTCTGTGGGCACCAGGCATGTA  244

seq1  TGTGATGGGGCACAGATACACATGTAGGCGAAAACACCCTTATACAAAAA  291
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGGAGCACAGATACACATGTAGGCGAAAACACCCTTATACAAAAA  294

seq1  AATAATATGTTTTCAATAAAATAAGAAAAATGTTTAAAAGGAAAGTAGTA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATATGTTTTCAATAAAATAAGAAAAATGTTTAAAAGGAAAGTAGTA  344

seq1  ACTCAGGCTGGGAATGTGCTAGCCTGGTACCACAAACCTTGCATTCAGAG  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGCTGGGAATGTGCTAGCCTGGTACCACAAACCTTGCATTCAGAG  394

seq1  CTCAGACCCATGTCACATGTTGAGATGGTACACGCTTTTAGTCCCCTCAG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGACCCATGTCACATGTTGAGATGGTACACGCTTTTAGTCCCCTCAG  444

seq1  AATTTGTGAGGTGGAAGCCAAAGGATTAAAGAGTCAGGCACATTCTCTGT  491
      ||||||||||||||||||| ||||||||||||||||||||||| ||||||
seq2  AATTTGTGAGGTGGAAGCCGAAGGATTAAAGAGTCAGGCACATCCTCTGT  494

seq1  GACATAGTCAGTTTGAGGAAAACCAGCCTGAGCTACATGAGACCCTCTCT  541
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GACATAGTCAGTTTGAGGAAGACCAGCCTGAGCTACATGAGACCCTCTCT  544

seq1  TGAAACACAAAGGAGGCAAAGAATGACTGTGGTCCAGGATTCTGGGGTCA  591
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TGAAACACAAAGGAAGCAAAGAATGACTGTGGTCCAGGATTCTGGGGTCA  594

seq1  CTGCCCCCAGCTTTGATTTACAAACCACCAGCTGTGTACAGTATGCAGTG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCCCAGCTTTGATTTACAAACCACCAGCTGTGTACAGTATGCAGTG  644

seq1  ATCAGAACCCACCTCACAGCTAATACTGCATTTGCTCCTGAGCATCAAGA  691
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATCAGAACCCACCTCACAGCTAATACTGCATTTGCTCCTTAGCATCAAGA  694

seq1  AGAAAGGCCAGGCACTTTTCCAAATGCTTTAGAAATAAAAAGTTGTATTT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGCCAGGCACTTTTCCAAATGCTTTAGAAATAAAAAGTTGTATTT  744

seq1  AATTCTCCACCACTTGAAGCAAGGATGCTTTTTGCCAGCCACATTTTAAA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTCCACCACTTGAAGCAAGGATGCTTTTTGCCAGCCACATTTTAAA  794

seq1  GAGAAGAACTAGGATCTGGATAGATGGCTTGGTGATTAAGAGCACTGGCT  841
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GAGAAGAACTAGGATCTGGATAGATGGCTTGGTGGTTAAGAGCACTGGCT  844

seq1  GCTCTTCAGGGAACCAAAGGTTGTTCTCAGGTACACACATAGTAGCTCAT  891
      |||||||||||||||||||||||||| |||||||||||||||| ||||||
seq2  GCTCTTCAGGGAACCAAAGGTTGTTCGCAGGTACACACATAGTGGCTCAT  894

seq1  GACCACCAACTATGACTGCAGTTCCTAGGGAACTGATGCTCTCTTTCAGC  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACCAACTATGACTGCAGTTCCTAGGGAACTGATGCTCTCTTTCAGC  944

seq1  CTCTGTGAGTCCCAGGCACGCATATGGTACACTGACTTATATGCAAAGAA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGAGTCCCAGGCACGCATATGGTACACTGACTTATATGCAAAGAA  994

seq1  ACATCACACATAAATAAAAACGAAGTATTTTTGTTTTGTTTTTTTGAGAC  1041
      ||||||||||||||||||||||            |||| |||||||||||
seq2  ACATCACACATAAATAAAAACG------------TTTG-TTTTTTGAGAC  1031

seq1  ATGATTTCTCTGTGTAGTCCTGACTGTCCAGGAATTCACCCTGTATACCA  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTCTCTGTGTAGTCCTGACTGTCCAGGAATTCACCCTGTATACCA  1081

seq1  GGCTGGCCTTGAACTCAAAGATGCACCCTCCACCTGAGCACTGGGATTAA  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGCCTTGAACTCAAAGATGCACCCTCCACCTGAGCACTGGGATTAA  1131

seq1  AGACGTGCACCACCAAGGTCAGCTTTACCCCTCAGTTTCATCATCTGTAA  1191
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGACGTGCACCACCAAGATCAGCTTTACCCCTCAGTTTCATCATCTGTAA  1181

seq1  ACAGAAGAATTC  1203
      ||||||||||||
seq2  ACAGAAGAATTC  1193


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