BAC Information

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BAC

Clone NameB6Ng01-222P08
Chromosome4 (Build37)
Map Location 76,359,195 - 76,504,983
singlet/doubletdoublet
Overlap geneLOC667858, LOC667862
Upstream geneLOC100039884, LOC667845, Ptprd
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222P08.bB6Ng01-222P08.g
ACCGA037834GA037835
length1,1431,074
definitionB6Ng01-222P08.b B6Ng01-222P08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,503,850 - 76,504,983)(76,359,195 - 76,360,255)
sequence
gaattccagaaatgtggtatattaaaaagcaataaaaattaaattgaaga
tttcaggcatgtgagtaaatgtcttaaacaaataacatagggaatgacat
ctaatgaatcaaacaatattggttataatttagttgttttatatcattta
ttaagtacttgaataaaacatccttattttttggtgaattctatgaaatg
catgcatgagatttcattttgttttgctttctcagacagaatcttactgg
gtagctaggctggacttgttgcagtgacctcctacctctgcctcccaagt
gctaggattacaaacttcatcaccactttcttgatgctgtggttacatat
atcacatatactcaggaatgcctcagtgaaagttaatgcacaccagtctt
ataaatgtgcattatcctcacttactcttgataaaatatcttatcaatga
gaaaatgtttcatagctggctcaagattgaaaggaattaattattggcct
tttgtgaaagatttatgttaagaaacacacatgtcaggatgttagcaatt
ttggcagtttagtcaggattagtttgagaactcagaatggtagttccaaa
ttgtaggtaatttaaagtaatcaaacctgtctgaaacagccttcaaaggt
tggttaaacatcttataaaattcattagcaaatccatctggaccagggtc
ttctccagatgggaggcattcattactgttcttcattacttatcatttat
tataggtggagtttatttttggaggtttatgatagttctattcaataaat
aaactaagaaatcatttattactcattcgatatatatttctataatgacc
acataaaaacattagtggtatgtttttgacatatcccaattaacatacat
gatttatattacatgtgcatttaaaaattttttaaatgtaaaaaattgtg
actgtttttggaaaaaaaatgttacctctattgctattcttttaagtgaa
atgtaactttctgaaatatgttaagcccttcaataagcatcatcttcatt
gggagagcttaattcttataactgggcattttaagatatcatgctaaatt
aagtaaaaggaaaatatctcaaagcatatgaattaagtcataa

gaattctttgtttagctctgtattccatttttaaatagggtatatttgat
tatctggattttaacttcttgagttctttctatatattagatactagccc
tctatcggatgtagggttggtaaaggtcttttcccaatgtgttcgttgct
attttgtcttattgacaatgtcttttgccttacagaagctttgcaatttt
atgaggtcccatttgtcaattcttgatcttatagcataagctactggtgt
tctgttcaggacattttcccctgtgcccatttgcttgaggctcttcccca
ctttcttttcaattagtttcactgtatctggttttatgtggaggtccttg
atctacttggatgtgagctttgtaccaggagttaagaatggattgatttg
cattcttctacatgctaacctccagttgaaccagcaccatttgttgacaa
tgctgtcttttttccactgtatggttttagcttttaaaggtgggtttttt
tttttagctccgtcaacattttgttaatttttgtttttaatactttcaaa
tatcaccatttataattgcttataaattatgttggacacatcatcgtagt
tcaatatttaacattgaaagtatttggaacattggactagaaaaatattt
tatgtagatctctttagaacaatagttggtatgggcacatgatgcagaca
tttttaaaagatcatgtgtaatataatattaactgtgagtgttggtttta
tgttggtttaacacaatctatagtcatctgagaggagaggacttcaactg
agtgaagaaatgtcgtcataataccaagctgcaccatcttgcaaaaatat
tttctttaattagtgttttgatggtgggagagcctagtccatagaaaaca
tactgaagcatatccagttagtagagtggaatccatagcctctgtattag
ttcctgatttcagggtccttgtccagtttgagctcctggctgaattcata
aattgataccacatccgccagtgattatggaattgtaagccaaatatctg
cttttctctctccaatcggctttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_76503850_76504983
seq2: B6Ng01-222P08.b_49_1191 (reverse)

seq1  TAATGACTT-ATTCATATGCTTTTGAG-TATTTT-CTTTTACTATAATTT  47
      | ||||||| |||||||||| |||||| |||||| |||||||| ||||||
seq2  TTATGACTTAATTCATATGC-TTTGAGATATTTTCCTTTTACT-TAATTT  48

seq1  AGCATGAATATCTTAAAATG-CCAGTTTATAGAATTAAGCTTCTCCCTAT  96
      |||||| ||||||||||||| ||||||   |||||||||| |||||| ||
seq2  AGCATG-ATATCTTAAAATGCCCAGTTATAAGAATTAAGC-TCTCCCAAT  96

seq1  GAAGATGATGCTTA-TGAA-GGCTT-ACATA-TTCAGAAAGTTACATTTC  142
      |||||||||||||| |||| ||||| ||||| ||||||||||||||||||
seq2  GAAGATGATGCTTATTGAAGGGCTTAACATATTTCAGAAAGTTACATTTC  146

seq1  AC-TAAAAG-ATAGCAATAGAGGTAACATTTTTTTT-CAAAAACAGTCAC  189
      || |||||| |||||||||||||||||||||||||| |||||||||||||
seq2  ACTTAAAAGAATAGCAATAGAGGTAACATTTTTTTTCCAAAAACAGTCAC  196

seq1  AATTTTTTACATTT-AAAAATTTTTAAATGCACATGTAATATAAATCATG  238
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AATTTTTTACATTTAAAAAATTTTTAAATGCACATGTAATATAAATCATG  246

seq1  TATGTTAATTGGGATATGTCAAAAACATACCACTAATGTTTTTATGTGGT  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTAATTGGGATATGTCAAAAACATACCACTAATGTTTTTATGTGGT  296

seq1  CATTATAGAAATATATATCG-ATGAGTAATAAATGATTTCTTAGTTTATT  337
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CATTATAGAAATATATATCGAATGAGTAATAAATGATTTCTTAGTTTATT  346

seq1  TATTGAATAGAACTATCATAAACCTCCAAAAATAAACTCCACCTATAATA  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAATAGAACTATCATAAACCTCCAAAAATAAACTCCACCTATAATA  396

seq1  AATGATAAGTAATGAAGAACAGTAATGAATGCCTCCCATCTGGAGAAGAC  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATAAGTAATGAAGAACAGTAATGAATGCCTCCCATCTGGAGAAGAC  446

seq1  CCTGGTCCAGATGGATTTGCTAATGAATTTTATAAGATGTTTAACCAACC  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTCCAGATGGATTTGCTAATGAATTTTATAAGATGTTTAACCAACC  496

seq1  TTTGAAGGCTGTTTCAGACAGGTTTGATTACTTTAAATTACCTACAATTT  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGGCTGTTTCAGACAGGTTTGATTACTTTAAATTACCTACAATTT  546

seq1  GGAACTACCATTCTGAGTTCTCAAACTAATCCTGACTAAACTGCCAAAAT  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTACCATTCTGAGTTCTCAAACTAATCCTGACTAAACTGCCAAAAT  596

seq1  TGCTAACATCCTGACATGTGTGTTTCTTAACATAAATCTTTCACAAAAGG  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAACATCCTGACATGTGTGTTTCTTAACATAAATCTTTCACAAAAGG  646

seq1  CCAATAATTAATTCCTTTCAATCTTGAGCCAGCTATGAAACATTTTCTCA  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATAATTAATTCCTTTCAATCTTGAGCCAGCTATGAAACATTTTCTCA  696

seq1  TTGATAAGATATTTTATCAAGAGTAAGTGAGGATAATGCACATTTATAAG  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAAGATATTTTATCAAGAGTAAGTGAGGATAATGCACATTTATAAG  746

seq1  ACTGGTGTGCATTAACTTTCACTGAGGCATTCCTGAGTATATGTGATATA  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTGTGCATTAACTTTCACTGAGGCATTCCTGAGTATATGTGATATA  796

seq1  TGTAACCACAGCATCAAGAAAGTGGTGATGAAGTTTGTAATCCTAGCACT  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACCACAGCATCAAGAAAGTGGTGATGAAGTTTGTAATCCTAGCACT  846

seq1  TGGGAGGCAGAGGTAGGAGGTCACTGCAACAAGTCCAGCCTAGCTACCCA  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGCAGAGGTAGGAGGTCACTGCAACAAGTCCAGCCTAGCTACCCA  896

seq1  GTAAGATTCTGTCTGAGAAAGCAAAACAAAATGAAATCTCATGCATGCAT  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGATTCTGTCTGAGAAAGCAAAACAAAATGAAATCTCATGCATGCAT  946

seq1  TTCATAGAATTCACCAAAAAATAAGGATGTTTTATTCAAGTACTTAATAA  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAGAATTCACCAAAAAATAAGGATGTTTTATTCAAGTACTTAATAA  996

seq1  ATGATATAAAACAACTAAATTATAACCAATATTGTTTGATTCATTAGATG  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATATAAAACAACTAAATTATAACCAATATTGTTTGATTCATTAGATG  1046

seq1  TCATTCCCTATGTTATTTGTTTAAGACATTTACTCACATGCCTGAAATCT  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCCCTATGTTATTTGTTTAAGACATTTACTCACATGCCTGAAATCT  1096

seq1  TCAATTTAATTTTTATTGCTTTTTAATATACCACATTTCTGGAATTC  1134
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTTAATTTTTATTGCTTTTTAATATACCACATTTCTGGAATTC  1143


seq1: chr4_76359195_76360255
seq2: B6Ng01-222P08.g_70_1143

seq1  GAATTCTTTGTTTAGCTCTGTATTCCATTTTTAAATAGGGTATATTTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGCTCTGTATTCCATTTTTAAATAGGGTATATTTGAT  50

seq1  TATCTGGATTTTAACTTCTTGAGTTCTTTCTATATATTAGATACTAGCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGGATTTTAACTTCTTGAGTTCTTTCTATATATTAGATACTAGCCC  100

seq1  TCTATCGGATGTAGGGTTGGTAAAGGTCTTTTCCCAATGTGTTCGTTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCGGATGTAGGGTTGGTAAAGGTCTTTTCCCAATGTGTTCGTTGCT  150

seq1  ATTTTGTCTTATTGACAATGTCTTTTGCCTTACAGAAGCTTTGCAATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTCTTATTGACAATGTCTTTTGCCTTACAGAAGCTTTGCAATTTT  200

seq1  ATGAGGTCCCATTTGTCAATTCTTGATCTTATAGCATAAGCTACTGGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGTCCCATTTGTCAATTCTTGATCTTATAGCATAAGCTACTGGTGT  250

seq1  TCTGTTCAGGACATTTTCCCCTGTGCCCATTTGCTTGAGGCTCTTCCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCAGGACATTTTCCCCTGTGCCCATTTGCTTGAGGCTCTTCCCCA  300

seq1  CTTTCTTTTCAATTAGTTTCACTGTATCTGGTTTTATGTGGAGGTCCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTTCAATTAGTTTCACTGTATCTGGTTTTATGTGGAGGTCCTTG  350

seq1  ATCTACTTGGATGTGAGCTTTGTACCAGGAGTTAAGAATGGATTGATTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACTTGGATGTGAGCTTTGTACCAGGAGTTAAGAATGGATTGATTTG  400

seq1  CATTCTTCTACATGCTAACCTCCAGTTGAACCAGCACCATTTGTTGACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTCTACATGCTAACCTCCAGTTGAACCAGCACCATTTGTTGACAA  450

seq1  TGCTGTCTTTTTTCCACTGTATGGTTTTAGCTTTTAAAGGTGGGTTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTCTTTTTTCCACTGTATGGTTTTAGCTTTTAAAGGTGGGTTTTTT  500

seq1  TTTTTAGCTCCGTCAACATTTTGTTAATTTTTGTTTTTAATACTTTCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGCTCCGTCAACATTTTGTTAATTTTTGTTTTTAATACTTTCAAA  550

seq1  TATCACCATTTATAATTGCTTATAAATTATGTTGGACACATCATCGTAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACCATTTATAATTGCTTATAAATTATGTTGGACACATCATCGTAGT  600

seq1  TCAATATTTAACATTGAAAGTATTTGGAACATTGGACTAGAAAAATATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATATTTAACATTGAAAGTATTTGGAACATTGGACTAGAAAAATATTT  650

seq1  TATGTAGATCTCTTTAGAACAATAGTTGGTATGGGCACATGATGCAGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAGATCTCTTTAGAACAATAGTTGGTATGGGCACATGATGCAGACA  700

seq1  TTTTT-AAAGATCATGTGTAATATAATATTAACTGTGAGTGTTGGTTTTA  749
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAAAGATCATGTGTAATATAATATTAACTGTGAGTGTTGGTTTTA  750

seq1  TGTTGGTTTAACACAATCTATAGTCATCTGAGAGGAGAGGACTTCAACTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGTTTAACACAATCTATAGTCATCTGAGAGGAGAGGACTTCAACTG  800

seq1  AGTGAAGAAATGTCGTCATAATACCAAGCTGCACCAATCTTGC-AGAATA  848
      ||||||||||||||||||||||||||||||||||| ||||||| | ||||
seq2  AGTGAAGAAATGTCGTCATAATACCAAGCTGCACC-ATCTTGCAAAAATA  849

seq1  TTTTC-TTAATTAGTG-TTTGAT-GTTGGAGAGCCTAGTCCATAGAAAAC  895
      ||||| |||||||||| |||||| || |||||||||||||||||||||||
seq2  TTTTCTTTAATTAGTGTTTTGATGGTGGGAGAGCCTAGTCCATAGAAAAC  899

seq1  ATACTG-AGCA-ATCCAGTAAGTAGAGT-GCATCCATAGCCTCTGTATCA  942
      |||||| |||| ||||||| |||||||| | ||||||||||||||||| |
seq2  ATACTGAAGCATATCCAGTTAGTAGAGTGGAATCCATAGCCTCTGTATTA  949

seq1  GTTCCTGATTCCAGGTTCC-TGTCCAGTTTGAGCTCCTGCCTGAATTCAT  991
      |||||||||| |||| ||| ||||||||||||||||||| ||||||||||
seq2  GTTCCTGATTTCAGGGTCCTTGTCCAGTTTGAGCTCCTGGCTGAATTCAT  999

seq1  TAAATGAT-CAACATCCG-CAGTGA-TATGGAATTGTAAGCCAAATAAGC  1038
       || |||| | ||||||| |||||| |||||||||||||||||||||   
seq2  AAATTGATACCACATCCGCCAGTGATTATGGAATTGTAAGCCAAATATCT  1049

seq1  GCTTTTCTCTC-CAAATC-GCTTTT  1061
      ||||||||||| | |||| ||||||
seq2  GCTTTTCTCTCTCCAATCGGCTTTT  1074


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