BAC Information

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BAC

Clone NameB6Ng01-223D11
Chromosome4 (Build37)
Map Location 37,541,256 - 37,542,068
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042132, LOC545600, LOC621458
Downstream geneLOC277771, LOC100039448
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-223D11.bB6Ng01-223D11.g
ACCGA038023GA038024
length1,1591,190
definitionB6Ng01-223D11.b B6Ng01-223D11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagatatgcaatttacattttccttcctcacttgaatttgaacac
ctggccttatatctggatttgtatcaaataaaatgctgtagtctttcctt
ttcatcttaatccattgacagggcactaggtacacattcattagaagatc
catctttcctcccacctgggaagccttttagcatgctgtcctttaagtct
gtttcagattcctttccatcaattcccaatacacaaaaatagattttact
ctgggcaactagtagccataattggcagggtatcagaagcactttcaaac
aggcaacatttagtcactttactctctctctctctctctctctctctctt
ttaattaggtattttcttcatttacatttccagtgctatctgaaaagccc
ctcactacctcccccaccactctcctacccacccactcccacttcttgga
cctggtgttcccctatactgaggcaaatgaagattgcacgaccaaaaggc
ctctctttccactgatggccgactaggccatctgctgctacatatgcagc
tagagacacgagctcctgggggtactggttagttcatattgttgttccac
ctatagtgttgcagaccccattagctccttgggtactttctctagctcct
aaattgggggccctgtgatccaaccaatagctgactgtgagcatccactt
ctgtgtttgctaggccccagcatagtttcacaagagacaactttatcagg
gtcctttcagcaaaatcttgctagtgtatgcaatggtgtcagcgtttgga
ggctaattatgggatggatccctggatatggcagtctctagatgggagtc
tctagatggtccatcctctgagccccaattttaatgggggttatttgatt
ttctggagtccaccttcttgagttctttatacatattggatattagtccc
ctatctgatttaggataggtaaagatacgtttcccaatctgttggtggcc
tttttgtcttattgacagtgtctcttgccttacagaagctttgcaatttt
tatgagtccattgtcattttgatcttacagcacagcaatgctgttctcct
caaggattttttcccctggtggcccatgttctttccgagcatttctccac
attctcctc

gaattcctgaattttccaagacttttatcatgaatgggtgttggatcttg
tcgaatactttttctgcatctaacgagatgatcatgtggtttttgtcctt
gagtttgtttatataacggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatctatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atctatattcacaagggaaattggtctgaagtactctatctttgttggat
ctttctgtggtttaggtgtcagagtaatcgtggcttcatagaatgagttg
ggtagagttccctctacttctattttgtggaatagtttgtgcagaactgg
aattagatcttctttaaaggtctggtagaactctgcactaaacccatctg
gtcctgggctttttttggctgggagactattaatgactgcttctatttct
ttaagagatatgggactgtttagatggttaacttgatcctgatttaactt
tggtacctggtatctgtctagaaatttgtccattttgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggttttttggata
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggatgttgtccctgtgccctctagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttatttctttga
atagtttttcttgtttccacttggttgatttcaccctggagtttgattat
ttcctgtgtctactcctcttggttgaattttcttccttcttttctagagc
tttttagatatgtgtcaaggctgctagtgtgtgtttctttttagtttctt
cttggaggcactcagagctatgagtttccctcttagaattgcttcattgt
gttccattaggttggggtatgatgtgcccttcatttcatttaaactctta
aaagctctttaattttcttctttaattcctcttgacaagggtatcattga
taagagagctggttcaagttcatgtgatggtgccttcacttatttatgtg
tatatgtgaagagacatcacgaccctcttgagcgcaatcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_37541256_37542068
seq2: B6Ng01-223D11.b_388_1200

seq1  TCTTTTAATTAGGTATTTTCTTCATTTACATTTCCAGTGCTATCTGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTAATTAGGTATTTTCTTCATTTACATTTCCAGTGCTATCTGAAAA  50

seq1  GCCCCTCACTACCTCCCCCACCACTCTCCTACCCACCCACTCCCACTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTCACTACCTCCCCCACCACTCTCCTACCCACCCACTCCCACTTCT  100

seq1  TGGACCTGGTGTTCCCCTATACTGAGGCAAATGAAGATTGCACGACCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCTGGTGTTCCCCTATACTGAGGCAAATGAAGATTGCACGACCAAA  150

seq1  AGGCCTCTCTTTCCACTGATGGCCGACTAGGCCATCTGCTGCTACATATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTCTCTTTCCACTGATGGCCGACTAGGCCATCTGCTGCTACATATG  200

seq1  CAGCTAGAGACACGAGCTCCTGGGGGTACTGGTTAGTTCATATTGTTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAGAGACACGAGCTCCTGGGGGTACTGGTTAGTTCATATTGTTGTT  250

seq1  CCACCTATAGTGTTGCAGACCCCATTAGCTCCTTGGGTACTTTCTCTAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTATAGTGTTGCAGACCCCATTAGCTCCTTGGGTACTTTCTCTAGC  300

seq1  TCCTAAATTGGGGGCCCTGTGATCCAACCAATAGCTGACTGTGAGCATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAATTGGGGGCCCTGTGATCCAACCAATAGCTGACTGTGAGCATCC  350

seq1  ACTTCTGTGTTTGCTAGGCCCCAGCATAGTTTCACAAGAGACAACTTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTGTGTTTGCTAGGCCCCAGCATAGTTTCACAAGAGACAACTTTAT  400

seq1  CAGGGTCCTTTCAGCAAAATCTTGCTAGTGTATGCAATGGTGTCAGCGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTCCTTTCAGCAAAATCTTGCTAGTGTATGCAATGGTGTCAGCGTT  450

seq1  TGGAGGCTAATTATGGGATGGATCCCTGGATATGGCAGTCTCTAGATGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGCTAATTATGGGATGGATCCCTGGATATGGCAGTCTCTAGATGGG  500

seq1  AGTCTCTAGATGGTCCATCCTCTGAGCCCCAATTTTAAT-GGGGTTATTT  549
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AGTCTCTAGATGGTCCATCCTCTGAGCCCCAATTTTAATGGGGGTTATTT  550

seq1  GATTTTCTGGAGTCCACCTTCTTGAGTTCTTTATACATATTGGATATTAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTCTGGAGTCCACCTTCTTGAGTTCTTTATACATATTGGATATTAG  600

seq1  TCCCCTATCTGATTTAGGATAGGTAAAGATACG-TTCCCAATCTGTTGGT  648
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCCCCTATCTGATTTAGGATAGGTAAAGATACGTTTCCCAATCTGTTGGT  650

seq1  GGCCTTTTTGTCTTATTGACAGTGTCTCTTGCCTTACAGAAGCTTTGCAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTTTTGTCTTATTGACAGTGTCTCTTGCCTTACAGAAGCTTTGCAA  700

seq1  -TTTTATGAGGTCCCATTTGTCAATTTTTGATCTTACAGCACAAGCCATT  747
       |||||||| ||||   ||||||  ||||||||||||||||||   || |
seq2  TTTTTATGA-GTCC--ATTGTCA--TTTTGATCTTACAGCACA--GCAAT  743

seq1  GCTGTTCTCTTCAGGGATTTTTTCCCCTG--TGCCCATG-TCTT--CGAG  792
      ||||||||| ||| |||||||||||||||   ||||||| ||||  ||| 
seq2  GCTGTTCTCCTCAAGGATTTTTTCCCCTGGTGGCCCATGTTCTTTCCGA-  792

seq1  GCTTTTCTCCACTTTCTCCTC  813
      || ||||||||| ||||||||
seq2  GCATTTCTCCACATTCTCCTC  813


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