BAC Information

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BAC

Clone NameB6Ng01-223I07
Chromosome4 (Build37)
Map Location 93,107,660 - 93,108,729
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC620269, LOC384125, Tusc1
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-223I07.bB6Ng01-223I07.g
ACCGA038241GA038242
length1,079995
definitionB6Ng01-223I07.b B6Ng01-223I07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactcagaacctgtgtaccaattctttccattttcttctggaatg
agaatgtttgctctactcttgtatacattagctctgtactttgatttcac
aagttcacaagtacagaggaattttacttctcagtgaatcatagtagctt
cagccttcccttcccttggtttagatgctatcttctcaggagacttttga
cctggagttgatgctgggatgacttaagattttctaagcagcagcgacag
gaacaaatccttccagatatgtaaaagagaatatacactgatgagatacg
caaacaaaggggacaaaatcttgcagcaaaatgatgataataataaacca
aaaaaaaaaaaaaaaatcccaggcccttaaagaatgaacgcttaacagag
tctgaagagtaagaaatgataagcctgaaaagggacttaaatgtggctag
gaactttcctaatctaagagctagggtgacctcgagctaaaataaatcta
gtaaagctgcaaaaataagttgttgtattgcagtttcataaaactataga
caaaataacaatgaaatcttcagaagaaaagcaataccttacatttaggt
aagaacaacttaaacatgaatagttatccacaaaaatctctgatagctga
agggaaaactcagtatttttaaagaacacacacacacacacacacacaca
cacacacacacacacacacatacactcacacatatacacattaccaggcc
agattctcatacccaataaaatgagcttgaacttctttatctagggtagg
accctacacaaagtgttcgtcttttcacataaacatgtctattgatattt
ccatccttatggtcttatttatgcatcccatttttaggagaggctgtttc
ccagcaggattgcaggattcctgctattctagctttgacaatcattctga
gccctttctgagctgtttccctgagtcctagctacagggacgatgatgta
aatatatctgtttgaagctggcatctccaagatcttattggatgtgtggc
ttgagtctgttgataaggaaggcttcttt
gaattcaaattaggattagttaaagaagtgtctatgagcagttatttaga
ggagtgtggacaatctatgagcagccatttgaaggaaaaatctgtactct
agcaattgttagatgtttagacatccttgaatgggatataacctggtgag
cctgctcctagctccagtgaattgtttataaatcttctggtggggagggg
ctaaatgagacctctcttctaatacctgactatggcctatatatcctttg
ggaaggtggagttctatgatcctctcccatcctccatgacggaaagttat
ttggcccaatcttcttcttttttttttatatgcatatactttaatgtata
taaatgacattatttttccattttttattaggtatttagctcatttacat
ttccaatgctataccaaaagtcccccatacccacccaccaccactcccct
acccacccactccccctttttggccctggcgttcccctgtactggggcat
ataaagtttgcgtgtccaatgggcctctctttccagtgatggccgactag
gccatcttttgatacatatgcagctagagtcaagagctccggggtactgg
ttagttcataatgttgttccacctatagggttgcagatccctttagctcc
ttgggttctttctctagctcctccattgggagccctgtgatccatccatt
agctgactgtgagcatccacttctgtgtttgctaggccccggtatagtct
cacaagagacagctacatctgggtcctttcgataaaatcttgctagtgta
tgcaatggtgtcagcgtttggatgctgattatggggtggatccctgggat
atggcagtctctagatggtccatccctttcatctcagctccaaactttgt
ctctgtaactccttccatgggtgttttgttcccaattctaaggagggcat
agtgtccacacttcagtcttcattcttcttgagtttcatggtgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_93107660_93108729
seq2: B6Ng01-223I07.b_46_1124

seq1  GAATTCACTCAGAACCTGTGTACCAATTCTTTCCATTTTCTTCTGGAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCAGAACCTGTGTACCAATTCTTTCCATTTTCTTCTGGAATG  50

seq1  AGAATGTTTGCTCTACTCTTGTATACATTAGCTCTGTACTTTGATTTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTTTGCTCTACTCTTGTATACATTAGCTCTGTACTTTGATTTCAC  100

seq1  AAGTTCACAAGTACAGAGGAATTTTACTTCTCAGTGAATCATAGTAGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCACAAGTACAGAGGAATTTTACTTCTCAGTGAATCATAGTAGCTT  150

seq1  CAGCCTTCCCTTCCCTTGGTTTAGATGCTATCTTCTCAGGAGACTTTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTTCCCTTCCCTTGGTTTAGATGCTATCTTCTCAGGAGACTTTTGA  200

seq1  CCTGGAGTTGATGCTGGGATGACTTAAGATTTTCTAAGCAGCAGCGACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAGTTGATGCTGGGATGACTTAAGATTTTCTAAGCAGCAGCGACAG  250

seq1  GAACAAATCCTTCCAGATATGTAAAAGAGAATATACACTGATGAGATACG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAATCCTTCCAGATATGTAAAAGAGAATATACACTGATGAGATACG  300

seq1  CAAACAAAGGGGACAAAATCTTGCAGCAAAATGATGATAATAATAAACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAAGGGGACAAAATCTTGCAGCAAAATGATGATAATAATAAACCA  350

seq1  AAAAAAAAAAAAAAAATCCCAGGCCCTTAAAGAATGAACGCTTAACAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAATCCCAGGCCCTTAAAGAATGAACGCTTAACAGAG  400

seq1  TCTGAAGAGTAAGAAATGATAAGCCTGAAAAGGGACTTAAATGTGGCTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGAGTAAGAAATGATAAGCCTGAAAAGGGACTTAAATGTGGCTAG  450

seq1  GAACTTTCCTAATCTAAGAGCTAGGGTGACCTCGAGCTAAAATAAATCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTTCCTAATCTAAGAGCTAGGGTGACCTCGAGCTAAAATAAATCTA  500

seq1  GTAAAGCTGCAAAAATAAGTTGTTGTATTGCAGTTTCATAAAACTATAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGCTGCAAAAATAAGTTGTTGTATTGCAGTTTCATAAAACTATAGA  550

seq1  CAAAATAACAATGAAATCTTCAGAAGAAAAGCAATACCTTACATTTAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATAACAATGAAATCTTCAGAAGAAAAGCAATACCTTACATTTAGGT  600

seq1  AAGAACAACTTAAACATGAATAGTTATCCACAAAAATCTCTGATAGCTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACAACTTAAACATGAATAGTTATCCACAAAAATCTCTGATAGCTGA  650

seq1  AGGGAAAACTCAGTATTTTTAAAGAACACACACACACACACACACACACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAAACTCAGTATTTTTAAAGAACACACACACACACACACACACACA  700

seq1  CACACACACACACACACACATACACTCACACATATACACATTACCAGGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACATACACTCACACATATACACATTACCAGGCC  750

seq1  AGATTCTCATACCCAATAAAATGAGCTTGAACTTCTTTATCTAGGGTAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCTCATACCCAATAAAATGAGCTTGAACTTCTTTATCTAGGGTAGG  800

seq1  ACCCTACACAAAGTGTTCGTCTTTTCACATAAACATGTCTATTGATATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTACACAAAGTGTTCGTCTTTTCACATAAACATGTCTATTGATATTT  850

seq1  CCATCCTTATGGTCTTATTTATGCAT-CCATTTTTAGGAGAGGCTGTTTC  899
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CCATCCTTATGGTCTTATTTATGCATCCCATTTTTAGGAGAGGCTGTTTC  900

seq1  CCAGCAGGATTGCAGGATTCCTGCTATTCTAGCTTTGACAATCATTCTGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAGGATTGCAGGATTCCTGCTATTCTAGCTTTGACAATCATTCTGA  950

seq1  G-CCTTTCTGAGCTGTTT-CCTGAGTCCTAGCTACAGGGACGATGATGTA  997
      | |||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GCCCTTTCTGAGCTGTTTCCCTGAGTCCTAGCTACAGGGACGATGATGTA  1000

seq1  AATATATCTG-TTGAAGCTGGCATCTCCAAGATC-TATT-GATGTGT-GC  1043
      |||||||||| ||||||||||||||||||||||| |||| ||||||| ||
seq2  AATATATCTGTTTGAAGCTGGCATCTCCAAGATCTTATTGGATGTGTGGC  1050

seq1  TTGAGTCTG-TGAT-AGGGAGGCTTCTTT  1070
      ||||||||| |||| ||| ||||||||||
seq2  TTGAGTCTGTTGATAAGGAAGGCTTCTTT  1079