BAC Information

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BAC

Clone NameB6Ng01-223L12
Chromosome4 (Build37)
Map Location 75,181,566 - 75,182,393
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039814, LOC636847, 3110001D03Rik, LOC623529, LOC100039833
Downstream geneLOC100039884, LOC667845, Ptprd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-223L12.bB6Ng01-223L12.g
ACCGA038379GA038380
length8371,172
definitionB6Ng01-223L12.b B6Ng01-223L12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggggcttgagctcactaaaccttgcaaggtcttctgtccggt
ggcacaggccacttgccctacatatgaaaagcattaattgtacttatgta
ttatttttaaaaaacagacatgagttgtaggaggctttggctgagatggg
aggaggttctgggaaaaattagcatgactgctgaagaataaaatttaaaa
tgtagttttaaaaagaaaaacatgttcaattattaagcatgagaatgcta
tggtagaaatcactctagtctggtgtataaccatttctagattagatata
gattgtatagtaagaaaacacaagaatggaaacaatcaaagctatgtatg
gagatgggtgtgagcagactgaagcgcagtactctctgtgtcagactcaa
aagtgttgcaattttgttataggatatttaagtatttccttaaattaaaa
gggtataaaattgtgaatagtgctttattttacctcaagtaagcatagaa
aatgagttttactgtggtattttcatatgtgcatcattgtgtcttctcat
atttgtcctctcatttttcctgtcccttctcccctgctttcttttgttac
tcttctcaaattttcattttctccccatgttgcacatatatatatatata
tatatagagagagagagagagagagagagagagagagagaggcttccagg
cagggaacatgactcatgagagagagcatggtgaatacttttgtctcctc
ccaccccaaactgccagtgcttaggattctttcccccctttagaatcttt
ttcctttcatggtgtgaaaagttttttgtatgcttaa

gaattctcttctgtgaagaagattcaattcctaacatgaagccattggtt
atctcaaaatagcaatgccactcttgcatcaatacgcatcttcttgtgca
tgtcacatttatattggactatataatacacaccactgggtaatagtatt
gatgtactttctccactatatacctaaattgaaccttcttgcattatgaa
atccagctatcaggaagtttcattattagtttgagattgatttatttatg
ctctgcagcctgaatgtgtggggagcgggtgtggcggcagtcccaaaggc
gccagggactgcagctaagtcatatgacttgcacctgacttcctcatata
agacacaaacatcttgagtgctgcgcaggtgtaccaggatacaggtgaat
ccaatttgatggagatatgcccctgctgccctgattagctgaagctgcgt
gcctggtgaggtagcgtggcctgctgtgcgtggatgggaactgagagtat
aaaagagtgagaggcccagggttcgagggagatataaaaacaagggagat
ataaacaagggagatataaacaagggagatataaacaagggagatataaa
caagaagaaacaggactgaataaatgtgtgcagaaggatcctgtagcagc
gtcgttcttcctggccagttgagcgtgcgcaacatgaatgtatgacatct
ttagcaataggatctcaacatcctgtgctgttcaacagaactcatgtgcc
tctctgaataataactactaaggaggtattacatgccttatatgaaatct
ttatgtagttaccatattccctaggaatagcattgctttgtatggtgcta
tgcaggtatgattaatttagctcctgtttcttaaaattatattttgagat
cattaccaactagtgggtttccctaagactttttgaaatatttcttagtt
ttgttagcccctttcccccacttttcccatatattcatgcctccacatct
tcacttaaatcatctcccttcttttatacacaatgtctctactattttca
tagtacatttttaataggttcctcaggtagagggtccattgccttttata
accgtctttagttaacctctattcactctgaattcttcagcctgctctgg
ttgcgattccgttagtaaacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_75181566_75182393
seq2: B6Ng01-223L12.b_48_884

seq1  GAATTCCAGGGGCTTGAGCTCACTAAACCTTGCAAGGTCTTCTGTCCGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGGGCTTGAGCTCACTAAACCTTGCAAGGTCTTCTGTCCGGT  50

seq1  GGCACAGGCCACTTGCCCTACATATGAAAAGCATTAATTGTACTTATGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAGGCCACTTGCCCTACATATGAAAAGCATTAATTGTACTTATGTA  100

seq1  TTATTTTTAAAAAACAGACATGAGTTGTAGGAGGCTTTGGCTGAGATGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTAAAAAACAGACATGAGTTGTAGGAGGCTTTGGCTGAGATGGG  150

seq1  AGGAGGTTCTGGGAAAAATTAGCATGACTGCTGAAGAATAAAATTTAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGTTCTGGGAAAAATTAGCATGACTGCTGAAGAATAAAATTTAAAA  200

seq1  TGTAGTTTTAAAAAGAAAAACATGTTCAATTATTAAGCATGAGAATGCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTTTTAAAAAGAAAAACATGTTCAATTATTAAGCATGAGAATGCTA  250

seq1  TGGTAGAAATCACTCTAGTCTGGTGTATAACCATTTCTAGATTAGATATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGAAATCACTCTAGTCTGGTGTATAACCATTTCTAGATTAGATATA  300

seq1  GATTGTATAGTAAGAAAACACAAGAATGGAAACAATCAAAGCTATGTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTATAGTAAGAAAACACAAGAATGGAAACAATCAAAGCTATGTATG  350

seq1  GAGATGGGTGTGAGCAGACTGAAGCGCAGTACTCTCTGTGTCAGACTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGGGTGTGAGCAGACTGAAGCGCAGTACTCTCTGTGTCAGACTCAA  400

seq1  AAGTGTTGCAATTTTGTTATAGGATATTTAAGTATTTCCTTAAATTAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTTGCAATTTTGTTATAGGATATTTAAGTATTTCCTTAAATTAAAA  450

seq1  GGGTATAAAATTGTGAATAGTGCTTTATTTTACCTCAAGTAAGCATAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATAAAATTGTGAATAGTGCTTTATTTTACCTCAAGTAAGCATAGAA  500

seq1  AATGAGTTTTACTGTGGTATTTTCATATGTGCATCATTGTGTCTTCTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGTTTTACTGTGGTATTTTCATATGTGCATCATTGTGTCTTCTCAT  550

seq1  ATTTGTCCTCTCATTTTTCCTGTCCCTTCTCCCCTGCTTTCTTTTGTTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTCCTCTCATTTTTCCTGTCCCTTCTCCCCTGCTTTCTTTTGTTAC  600

seq1  TCTTCTCAAATTTTCATTTTCTCCCCATGTTGCACATATATATATATATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCAAATTTTCATTTTCTCCCCATGTTGCACATATATATATATATA  650

seq1  TATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGC-TCCAGG  699
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGCTTCCAGG  700

seq1  CAGGGAACATGACTCATGAGAGAGAGCAT-GTG-ATAC-TTTGTCTCCTC  746
      ||||||||||||||||||||||||||||| ||| |||| |||||||||||
seq2  CAGGGAACATGACTCATGAGAGAGAGCATGGTGAATACTTTTGTCTCCTC  750

seq1  CCACCCC-AACTGCCAGTGC-TAGGATTCTTT-CCCCCTTTAG-ATC-TT  791
      ||||||| |||||||||||| ||||||||||| |||||||||| ||| ||
seq2  CCACCCCAAACTGCCAGTGCTTAGGATTCTTTCCCCCCTTTAGAATCTTT  800

seq1  TTCCTTTCATGGTGTGAAAAGTTTTTGTAATGCTTAA  828
      ||||||||||||||||||||||||||   ||||||||
seq2  TTCCTTTCATGGTGTGAAAAGTTTTTTGTATGCTTAA  837


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