BAC Information

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BAC

Clone NameB6Ng01-223N18
Chromosome4 (Build37)
Map Location 147,135,654 - 147,136,718
singlet/doubletsinglet
Overlap geneLOC100041677
Upstream geneOTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652
Downstream geneLOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1, Frap1, Angptl7, Exosc10, LOC100043151, Srm, Masp2, Tardbp, Gm572, LOC100041733, LOC100041742
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-223N18.bB6Ng01-223N18.g
ACCGA038487GA038488
length9071,067
definitionB6Ng01-223N18.b B6Ng01-223N18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcatattggttccctgaactgtagagtgagggctattatggttg
gaaaggccaaatggaagcctttagagttgcctttgccaaagaaaatagtg
aatcaaaaacagtatcgtattcctggaggcattgcagaaattactgccac
tatcaaggacttgaaagacacaggggtggtggttcccaccacatctccgt
ttaactctcctatctggccagtgcagaaaacagatggatcatggagaatg
acagttgattatcgaaaactaaatcaggtagtaactccaattgcagctgc
tgtaccagatgtagtttcgttacttgagcaaattaacacatctcctggca
cctggtatgcggctattgatctggcaaatgccttcttctcagtacctgtc
cataaggaccaccagaagcaatttgctttcagttggcaaggccaacagta
taccttcacagttttgcctcaaggatatattaactctcctgccctgtgtc
ataatttagttagaagggatcttgatcgtttggatcttccacaaaatatc
acattggtgcactatattgatgacattatgctgattggaccaagtgagca
ggaagtagcaaccactttggactcattggtaacacatatgcgtatcagag
gatgggaaataaatccaaccaaaattcaaggaccatctacctcagtgaaa
ttcttaggagtccagtggtgtggggcgtgcagagatattccttctaaggt
gaaagataagttattgcacctggtcccctcctacaaccaagaaagaagca
caacgtttagtgggccctatttggattctggagacaacacatccctcact
tgggtgtgttacttaggcctatttaccaagttgactctgaagctgctagc
tttgtgc
gaattctctctctgaaaggtaaccttaaatccaatcagaatatgttttac
tgtaattggtttttgtctgctgctttcataaagcaccatgttcaaggaaa
ctaatagaagaaaaagactactttgggtaatgcttccagaggatagccat
caaccatgacagggaggacacatagaacattgccatgttgttgaagtaga
aaggtgaaagatcacatcttcaaccccagtcactaaagaggaagaaagaa
ttaagatggcttggatctatctattcttttttctcatagccaacccccag
tgtcatactttattcagtaatgttccaacagctaaattcctcaaacgatt
gtgacccactgaggacccaactttaaaagataaaagtattatccaatagg
agaatcagccttctaatatccttgtacttttaaaattgattttgatatca
atgtagaagacaaagctctaattttttgtatgggtttcctgtttgtttgt
ttgtgtgtttgtttgtttgtaaaacagggtcccacactctatttctaact
ttcacatgtccttatatagagaccagaatggcttttaggttacatccctg
acagctaggatgaaagacctttctttgacgagctgattttttgtttgttt
gtttgtttgtttgtttgtttgaatggtgtatcttcacatattggccattg
agttaccaccaggcttacagaatttatttcagagtgagcattccttagat
ttttatatctctggataagatgttcacatcctgcacatgtataattattc
tcttacccacttgaaggaattctctggaatttcattaagtttgtttctgc
cttctttgaattcctgtgcttgttccctctttatgacatttgtccacatt
ggaatggtgttcatattatattttgagtttgtttcataattcatttttgt
catgagaattggtattgcattagtgatttggggttagggaattttactac
attttcaatttggctttagctacagccttctcaatttcttgcctgtgtgt
ccatttaggtcaggtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_147135654_147136718
seq2: B6Ng01-223N18.g_70_1136 (reverse)

seq1  TCACCTGACCTAAAT-GACACACAGCAAAAGAAAATTGAG-AGGCTGTAG  48
      ||||||||||||||| |||||||||  ||   |||||||| |||||||||
seq2  TCACCTGACCTAAATGGACACACAGGCAA--GAAATTGAGAAGGCTGTAG  48

seq1  CTAAAG-CAATTTGAAAATGTTAATAAAATTTCCCTACCCCAAATCACTA  97
      |||||| ||| ||||||||| || ||||||| ||  ||||||||||||||
seq2  CTAAAGCCAAATTGAAAATG-TAGTAAAATTCCCTAACCCCAAATCACTA  97

seq1  ATGCAATACCAATTCTCATGAC-AAAATGAATTATGAAACAAACTCAAAA  146
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ATGCAATACCAATTCTCATGACAAAAATGAATTATGAAACAAACTCAAAA  147

seq1  TATAATATGAACACCATT-CAATGTGGACAAATGTCATAAAGAGGGAACA  195
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TATAATATGAACACCATTCCAATGTGGACAAATGTCATAAAGAGGGAACA  197

seq1  AGCACAGGAATTCAAAGAAGGCAGAAACAAACTTAATGAAATTCCAGAGA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAGGAATTCAAAGAAGGCAGAAACAAACTTAATGAAATTCCAGAGA  247

seq1  ATTCCTTCAAGTGGGTAAGAGAATAATTATACATGTGCAGGATGTGAACA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTCAAGTGGGTAAGAGAATAATTATACATGTGCAGGATGTGAACA  297

seq1  TCTTATCCAGAGATATAAAAATCTAAGGAATGCTCACTCTGAAATAAATT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATCCAGAGATATAAAAATCTAAGGAATGCTCACTCTGAAATAAATT  347

seq1  CTGTAAGCCTGGTGGTAACTCAATGGCCAATATGTGAAGATACACCATTC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAGCCTGGTGGTAACTCAATGGCCAATATGTGAAGATACACCATTC  397

seq1  AAACAAACAAACAAACAAACAAACAAACAAAAAATCAGCTCGTCAAAGAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACAAACAAACAAACAAACAAACAAAAAATCAGCTCGTCAAAGAA  447

seq1  AGGTCTTTCATCCTAGCTGTCAGGGATGTAACCTAAAAGCCATTCTGGTC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTTTCATCCTAGCTGTCAGGGATGTAACCTAAAAGCCATTCTGGTC  497

seq1  TCTATATAAGGACATGTGAAAGTTAGAAATAGAGTGTGGGACCCTGTTTT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATATAAGGACATGTGAAAGTTAGAAATAGAGTGTGGGACCCTGTTTT  547

seq1  ACAAACAAACAAACACACAAACAAACAAACAGGAAACCCATACAAAAAAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAACAAACACACAAACAAACAAACAGGAAACCCATACAAAAAAT  597

seq1  TAGAGCTTTGTCTTCTACATTGATATCAAAATCAATTTTAAAAGTACAAG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCTTTGTCTTCTACATTGATATCAAAATCAATTTTAAAAGTACAAG  647

seq1  GATATTAGAAGGCTGATTCTCCTATTGGATAATACTTTTATCTTTTAAAG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTAGAAGGCTGATTCTCCTATTGGATAATACTTTTATCTTTTAAAG  697

seq1  TTGGGTCCTCAGTGGGTCACAATCGTTTGAGGAATTTAGCTGTTGGAACA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTCCTCAGTGGGTCACAATCGTTTGAGGAATTTAGCTGTTGGAACA  747

seq1  TTACTGAATAAAGTATGACACTGGGGGTTGGCTATGAGAAAAAAGAATAG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGAATAAAGTATGACACTGGGGGTTGGCTATGAGAAAAAAGAATAG  797

seq1  ATAGATCCAAGCCATCTTAATTCTTTCTTCCTCTTTAGTGACTGGGGTTG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATCCAAGCCATCTTAATTCTTTCTTCCTCTTTAGTGACTGGGGTTG  847

seq1  AAGATGTGATCTTTCACCTTTCTACTTCAACAACATGGCAATGTTCTATG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGTGATCTTTCACCTTTCTACTTCAACAACATGGCAATGTTCTATG  897

seq1  TGTCCTCCCTGTCATGGTTGATGGCTATCCTCTGGAAGCATTACCCAAAG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTCCCTGTCATGGTTGATGGCTATCCTCTGGAAGCATTACCCAAAG  947

seq1  TAGTCTTTTTCTTCTATTAGTTTCCTTGAACATGGTGCTTTATGAAAGCA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTTTTTCTTCTATTAGTTTCCTTGAACATGGTGCTTTATGAAAGCA  997

seq1  GCAGACAAAAACCAATTACAGTAAAACATATTCTGATTGGATTTAAGGTT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACAAAAACCAATTACAGTAAAACATATTCTGATTGGATTTAAGGTT  1047

seq1  ACCTTTCAGAGAGAGAATTC  1065
      ||||||||||||||||||||
seq2  ACCTTTCAGAGAGAGAATTC  1067