BAC Information

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BAC

Clone NameB6Ng01-224O12
Chromosome4 (Build37)
Map Location 24,314,984 - 24,316,118
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC625462, LOC383998, LOC100040464, LOC623873, LOC664973
Downstream geneF730047E07Rik, Klhl32, 1110007M04Rik, C230012O17Rik, Gpr63, Fhl5, 1810074P20Rik, Prdx6-rs2, LOC665019
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-224O12.bB6Ng01-224O12.g
ACCGA039237GA039238
length1,1321,194
definitionB6Ng01-224O12.b B6Ng01-224O12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttccacatctcaaatgaattcatctgtaaactttataatatct
tacatattttatggaagtaagagtttttagtatgtgcttatcaaactaaa
atttgcctctaaaattgttcattctgtttttaaactttcccactgatcat
agatataagacactttttatcatttctttattaccttgtgtttaggatat
ttcagataaatattgcctagaaattcagtgttttgtattatcagtaactt
gaacaattttttaattagagataattctatacggaatagtttgcttctct
gaatatttataaattacctgatttataagcatataaacatttaagtgttt
atatgagtttaaggtgttattatttgtttgaaagatatccagagagaata
aatttttgatatgatttaaattattttattgctactcatataatacagag
tatgtgtcaaattttattatttatattatactttttgttttggaacatag
tttctgaaatactcataatattattttgcatttgaggttatttaggcata
tgactcatgtgttacacatgtgaataatatatttcatgtctctataggat
gggcattaatgtaggtgcaggacttgcaaacttactgcctttgaattgaa
tctggttcaccaagtctttctatgactatggttttatttgaatactatgt
tattcattcatttgcatattacctgttaaaacttcatgttgtaatagctt
gctctgcaaagtcatgttctttatagacaaaatgtgtttttctgacctac
atattaacctcacagatttattggatccttatattccagagattggttat
gtattgatttttaagtattttctaccctgcctattttttgctcctgacat
atgaaaagtgaggcagtccacaggtatcaacctaaacaaattttcaggaa
atctgtatttgagatagagtataacaatgtagcctggctgttctagaaca
tgtacaaggctgggctcaacttggcagcagtattcttgcttctaccttcc
aagtgctggatcacaagtatgtgggataagctgaattatgttatcttttg
atcatcatatctatctttaggtttaggcacaa
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggcgaggatgtgtagaaaggggaacactcctccttgttggtgg
gattgcaagctgtacaaccactctggaaatcagtctggcggttcctcaga
aaattggacatagtactaccggaggatcctgcaatgcctctcctgggcat
atatccagaagatgtcccaaccggtaagaaggacacatgctccactatgt
tcatagcagccttgtttataatagccagaagctggaaagaacccagatgc
ccctcaacagaggaatggatacagaaaatgtggtacatttacacaatgga
atactactcagctattaaaaaaatgaatttatgaaattcctaggcaaatg
gatggacctggagggtatcatcctgagtgaggtaacccaatcacaaagga
actcgcacaatatgtactcactgataagtggatattagcccagaaactta
ggatacccaagatataagatacaatttgccaaacgcatgaaattcaagaa
gaacgaagaccttagtgtggacactttaccctttcttagaaatgggaaca
aaacacccatggaaggagttacagagacaaaatttggagctgtgatgaaa
ggatggaccatctagtgattgccatatgcagggatccatcccataatcag
cttccaaatgctgacaccattgcatacactagcaagattttgctgaaagg
acccagatatagctcttctcttctgagactttgcaggggcctagcaaaca
cagaagtggatgatcacagtcagctattggatgggtcaccagggccccca
atggagagctagagaaattacccatggagctaaagggaagtgcatcctat
aggtgaacacatattgaactaccagtaccccggagctcttgtctctaagc
ttgcaatattgttttcaaagaatggctagtcgccatccactgccaagaga
gggcccaatggacttgcaactttatatgccctcagcaccggatgccaggc
aaaaggggagtggggtggcatatgggatattctgtcactgtcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_24314984_24316118
seq2: B6Ng01-224O12.b_48_1179 (reverse)

seq1  TTGTGCTTAAAACTAAAGATAGAATATGATGATCAAAAAGATAACATAAA  50
      |||||| |||| |||||||||| ||||||||||| |||||||||||||| 
seq2  TTGTGCCTAAACCTAAAGATAG-ATATGATGATC-AAAAGATAACATAAT  48

seq1  TCAGGCTTAATCCCACATACTTGTGATCCCAGCACTTGGAAGGTAGAGGC  100
      ||| |||| |||||||||||||||||| ||||||||||||||||||| ||
seq2  TCA-GCTT-ATCCCACATACTTGTGAT-CCAGCACTTGGAAGGTAGAAGC  95

seq1  AAGAATACTGCTGCAAGTTTGAGGCCAGCCTGGTACATGTTCTAGAACAG  150
      |||||||||||||| |  ||||| ||||||| ||||||||||||||||||
seq2  AAGAATACTGCTGCCAAGTTGAGCCCAGCCTTGTACATGTTCTAGAACAG  145

seq1  CCAGGCTACATTGTAATACTCTATCTCAAATACAGATTTCTTG-AAATTT  199
      |||||||||||||| ||||||||||||||||||||||||| || ||||||
seq2  CCAGGCTACATTGTTATACTCTATCTCAAATACAGATTTCCTGAAAATTT  195

seq1  GTTTAGGTTGATACCTGTGGACTGCCTCACTTTTCATATGTCAGGAGC-A  248
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GTTTAGGTTGATACCTGTGGACTGCCTCACTTTTCATATGTCAGGAGCAA  245

seq1  AAAATAGGCAGGGTAGAAAATACTTAAAAATCAATACATAACCAATCTCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGGCAGGGTAGAAAATACTTAAAAATCAATACATAACCAATCTCT  295

seq1  GGAATATAAGGATCCAATAAATCTGTGAGGTTAATATGTAGGTCAGAAAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATATAAGGATCCAATAAATCTGTGAGGTTAATATGTAGGTCAGAAAA  345

seq1  ACACATTTTGTCTATAAAGAACATGACTTTGCAGAGCAAGCTATTACAAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATTTTGTCTATAAAGAACATGACTTTGCAGAGCAAGCTATTACAAC  395

seq1  ATGAAGTTTTAACAGGTAATATGCAAATGAATGAATAACATAGTATTCAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGTTTTAACAGGTAATATGCAAATGAATGAATAACATAGTATTCAA  445

seq1  ATAAAACCATAGTCATAGAAAGACTTGGTGAACCAGATTCAATTCAAAGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACCATAGTCATAGAAAGACTTGGTGAACCAGATTCAATTCAAAGG  495

seq1  CAGTAAGTTTGCAAGTCCTGCACCTACATTAATGCCCATCCTATAGAGAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAGTTTGCAAGTCCTGCACCTACATTAATGCCCATCCTATAGAGAC  545

seq1  ATGAAATATATTATTCACATGTGTAACACATGAGTCATATGCCTAAATAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATATATTATTCACATGTGTAACACATGAGTCATATGCCTAAATAA  595

seq1  CCTCAAATGCAAAATAATATTATGAGTATTTCAGAAACTATGTTCCAAAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAATGCAAAATAATATTATGAGTATTTCAGAAACTATGTTCCAAAA  645

seq1  CAAAAAGTATAATATAAATAATAAAATTTGACACATACTCTGTATTATAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGTATAATATAAATAATAAAATTTGACACATACTCTGTATTATAT  695

seq1  GAGTAGCAATAAAATAATTTAAATCATATCAAAAATTTATTCTCTCTGGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGCAATAAAATAATTTAAATCATATCAAAAATTTATTCTCTCTGGA  745

seq1  TATCTTTCAAACAAATAATAACACCTTAAACTCATATAAACACTTAAATG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTCAAACAAATAATAACACCTTAAACTCATATAAACACTTAAATG  795

seq1  TTTATATGCTTATAAATCAGGTAATTTATAAATATTCAGAGAAGCAAACT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATGCTTATAAATCAGGTAATTTATAAATATTCAGAGAAGCAAACT  845

seq1  ATTCCGTATAGAATTATCTCTAATTAAAAAATTGTTCAAGTTACTGATAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCGTATAGAATTATCTCTAATTAAAAAATTGTTCAAGTTACTGATAA  895

seq1  TACAAAACACTGAATTTCTAGGCAATATTTATCTGAAATATCCTAAACAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAACACTGAATTTCTAGGCAATATTTATCTGAAATATCCTAAACAC  945

seq1  AAGGTAATAAAGAAATGATAAAAAGTGTCTTATATCTATGATCAGTGGGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAATAAAGAAATGATAAAAAGTGTCTTATATCTATGATCAGTGGGA  995

seq1  AAGTTTAAAAACAGAATGAACAATTTTAGAGGCAAATTTTAGTTTGATAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTAAAAACAGAATGAACAATTTTAGAGGCAAATTTTAGTTTGATAA  1045

seq1  GCACATACTAAAAACTCTTACTTCCATAAAATATGTAAGATATTATAAAG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATACTAAAAACTCTTACTTCCATAAAATATGTAAGATATTATAAAG  1095

seq1  TTTACAGATGAATTCATTTGAGATGTGGAAAGAATTC  1135
      |||||||||||||||||||||||||||||||||||||
seq2  TTTACAGATGAATTCATTTGAGATGTGGAAAGAATTC  1132