BAC Information

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BAC

Clone NameB6Ng01-224O24
Chromosome4 (Build37)
Map Location 11,247,373 - 11,248,309
singlet/doubletsinglet
Overlap geneDpy19l4
Upstream geneLOC666840, 1700123O12Rik, LOC383991, LOC100039656, LOC545589, 2610301B20Rik, LOC383992, LOC100039746, Plekhf2, 2310030N02Rik, LOC546828, LOC666897, Trp53inp1, Ccne2, Ints8
Downstream geneRbm35a, LOC634834, 1110037F02Rik, LOC100039847, E130016E03Rik, LOC100039862, Gem, Cdh17, Ppm2c, Tmem67, C430048L16Rik, LOC230010, LOC623671, LOC100039958, Rbm12b, 6720467C03Rik, LOC545592
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-224O24.bB6Ng01-224O24.g
ACCGA039259GA039260
length9411,142
definitionB6Ng01-224O24.b B6Ng01-224O24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatggaaagccatttttcaaaagactattagaagtacatgctga
ctgggactagatgtcctgtccctgaggtcatgattcagccattcctcctc
ttcctgcagctcttcgtgttaaatttcatgcacatttaagatactaccta
aaaccagcctcaaaacaggttgctggtaaggaagaatgtaattcctcttt
tttctttagctatagctatatctgtgtttgcaatgtgttatcatttgaca
aagattttttttaaactttatttttgtgattagttacaaatctgtgtggg
taggttgataaaccagtttgtctttgtgagcacattaatacttaacacag
gagaaaaatcgcacagtgccactaaaacttgatattgtaaatatgcagaa
attgcatttaagatggaattattatacttaataactatgatgtggacctt
tttaaaaggctatatcattttgtaaaagtagttgactataaactgttaaa
tgatttttggttatagaattacaggtaatctaaaaacatgtgttttattc
aggacaattactgggtggcagttttattaaaataatgggtccttttcaac
aaatatttaattccttggctaagtctctattcttttgggtgctgggatat
aataagttcaacaaagtataaatatttattgtaatgatgtttgtgatgat
aatatttacagcaaacacgtcccgtgtcagaatttccccgaatccctttc
tgtttacatatcgtgtattttattatgtaaaattagccagtctctaatat
tctgtttgaatttcagtcaaggtacagttatagctttggcttattctcaa
gtcccttcaggagccttctttgttgacagctgtccctggaagtaatgtta
ctccagactgcctcttcctgtactgtgggtggcaatggtgc
gaattctcttacctggtgaggggtggttggggtcaagatctgtgtcactg
tccacttcctagcttctgtgagccatcgttgcccattcttcagggtatat
cccaggtaggtcacctcagtccggcataactgtgccttcttagccgaagc
ccggtaccccaactcacctaactcggccagaattttctgagtcctgagtt
cacactcttcacgtgtttctgtggccaccaaaaggtcatctacatattgt
aagaaagtcacctggggattgttggcctgaaaggaggcaagatctcgatg
tagagcttcatcaaacaaggtgggtgaattcttaaatccctgaggcagtc
tcatccatgtgagctgcccggatcttctgttctctaggtcttgccattca
aaggcaaacaagggctggctgttggggtgtagtttcaggcaaaagaaagc
gtctttaagatctaagattgtataccaggttcgttcgggtggcagcgtgc
tgagcaggttgtaaggattgggcactgttgggtggatatcttgaactctt
ttattgacctctctaaggtcctgtacagggcgatagtcattcgtccccag
tttctttaccgggagtaggggggtattccaaggagacttacatgggacta
gggtcccctgttggagcagtctggtgatatgggggcgtatgccctcctgc
acttcttctgcccatggagtactgtcagaccccaatgggagtggccccag
acttaagttcaattaccacggggggggaactaatctggccattcccattc
ccccgttttggcccatgtctgaggaaattcgagtaagccagttcctgtag
tcctcaggggttttcatttcattttgataaatctgatactctctcctaat
tgtaaagacaacactaagtctgaggtggtctcattcccccaggacattct
tgtccagaggggggcaaatgttatttggtgcctttatttcggtccatata
gttccttttcccagttaaaggccatagggcactcaggatgaccctaaaaa
tgagttgacttagctcttttcttaggtccatcgtccctgagtggctcaca
tggtatggattccttaacccccacatgttcctccataatcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_11247373_11248309
seq2: B6Ng01-224O24.b_47_987 (reverse)

seq1  GCACCATTG-CACACACAGTACAGG-AGAGGC-GTCTGGAAGAACATTTA  47
      ||||||||| ||| ||||||||||| |||||| |||||||  |||| |||
seq2  GCACCATTGCCACCCACAGTACAGGAAGAGGCAGTCTGGAGTAACA-TTA  49

seq1  CTTCCAGGGACAGCTGGACAACAAAG-AGGCTCCTGAA-GGACCTGAGAA  95
      ||||||||||||||| | |||||||| ||||||||||| |||| ||||||
seq2  CTTCCAGGGACAGCT-GTCAACAAAGAAGGCTCCTGAAGGGACTTGAGAA  98

seq1  TAAGCCAAAAGCTATAAACTGTACC-TGACCTGAATTCAAACAAGAATA-  143
      |||||| |||||||| ||||||||| ||||   ||||||||| |||||| 
seq2  TAAGCC-AAAGCTAT-AACTGTACCTTGACTGAAATTCAAAC-AGAATAT  145

seq1  TAGAGACTGGCCTAATTTTAACATAAT-AAATACACGATATGTAAACAG-  191
      |||||||||| |||||||| ||||||| ||||||||||||||||||||| 
seq2  TAGAGACTGG-CTAATTTT-ACATAATAAAATACACGATATGTAAACAGA  193

seq1  AAGGGATTCGGGGAAATTCCTGACACGGGACGTGTTTGCTGTAAATATTA  241
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AAGGGATTCGGGGAAATT-CTGACACGGGACGTGTTTGCTGTAAATATTA  242

seq1  TCATCACAAACATCATTACAATAAATATTTATACTTTGTTGA--CTATTA  289
      ||||||||||||||||||||||||||||||||||||||||||   |||||
seq2  TCATCACAAACATCATTACAATAAATATTTATACTTTGTTGAACTTATTA  292

seq1  TATCCCAGCACCCAAAAGAATAGAGACTTAGCCAAGGAATTAAATATTTG  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCAGCACCCAAAAGAATAGAGACTTAGCCAAGGAATTAAATATTTG  342

seq1  TTG-AAAGGACCCATTATTTTAATAAAACTGCCACCCAGTAATTGTCCTG  388
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAGGACCCATTATTTTAATAAAACTGCCACCCAGTAATTGTCCTG  392

seq1  AATAAAACACATGTTTTTAGATTACCTGTAATTCTATAACCAAAAATCAT  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAACACATGTTTTTAGATTACCTGTAATTCTATAACCAAAAATCAT  442

seq1  TTAACAGTTTATAGTCAACTACTTTTACAAAATGATATAGCCTTTTAAAA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAGTTTATAGTCAACTACTTTTACAAAATGATATAGCCTTTTAAAA  492

seq1  AGGTCCACATCATAGTTATTAAGTATAATAATTCCATCTTAAATGCAATT  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCACATCATAGTTATTAAGTATAATAATTCCATCTTAAATGCAATT  542

seq1  TCTGCATATTTACAATATCAAGTTTTAGTGGCACTGTGCGATTTTTCTCC  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCATATTTACAATATCAAGTTTTAGTGGCACTGTGCGATTTTTCTCC  592

seq1  TGTGTTAAGTATTAATGTGCTCACAAAGACAAACTGGTTTATCAACCTAC  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTAAGTATTAATGTGCTCACAAAGACAAACTGGTTTATCAACCTAC  642

seq1  CCACACAGATTTGTAACTAATCACAAAAATAAAGTTTAAAAAAAATCTTT  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACAGATTTGTAACTAATCACAAAAATAAAGTTTAAAAAAAATCTTT  692

seq1  GTCAAATGATAACACATTGCAAACACAGATATAGCTATAGCTAAAGAAAA  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAATGATAACACATTGCAAACACAGATATAGCTATAGCTAAAGAAAA  742

seq1  AAGAGGAATTACATTCTTCCTTACCAGCAACCTGTTTTGAGGCTGGTTTT  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGAATTACATTCTTCCTTACCAGCAACCTGTTTTGAGGCTGGTTTT  792

seq1  AGGTAGTATCTTAAATGTGCATGAAATTTAACACGAAGAGCTGCAGGAAG  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGTATCTTAAATGTGCATGAAATTTAACACGAAGAGCTGCAGGAAG  842

seq1  AGGAGGAATGGCTGAATCATGACCTCAGGGACAGGACATCTAGTCCCAGT  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGAATGGCTGAATCATGACCTCAGGGACAGGACATCTAGTCCCAGT  892

seq1  CAGCATGTACTTCTAATAGTCTTTTGAAAAATGGCTTTCCATTGAATTC  937
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATGTACTTCTAATAGTCTTTTGAAAAATGGCTTTCCATTGAATTC  941