BAC Information

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BAC

Clone NameB6Ng01-224P11
Chromosome4 (Build37)
Map Location 55,060,120 - 55,168,026
singlet/doubletdoublet
Overlap geneZfp462, LOC670211
Upstream geneLOC666901, LOC100041303, LOC384018, EG666920
Downstream geneRad23b, LOC666953, LOC100041348, Klf4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-224P11.bB6Ng01-224P11.g
ACCGA039281GA039282
length606814
definitionB6Ng01-224P11.b B6Ng01-224P11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(55,167,421 - 55,168,026)(55,060,120 - 55,060,932)
sequence
gaattcaagagtctcacccttagatgcccccggttcatcacagggcaatg
actgcttatttttctggagggaactgtatctgtccccagtctatgacctc
cactgtattgcaactgttcctttttcacacctctcagacattactagttg
aaaatagcactcctctctattgagcctgatcataattctttatagagcat
ttcagtgagaggtcacaagtagccttcagtagaagcaaaagaagaaataa
acaattacccatctctagcagggctctgagaggatcatgtgaagtagcca
atggcttacaagccatatttagggttctccggtggcagactctgacttcc
ctgagacccatcggcccccacaaagctgactcacctcttgtttgacacat
tgctggcacaggtgttaaagctgatgaaagagggaaatgttggcactgtt
atgccaccagccttaaataaggacagagagtgaccaggacaataaataat
acttagcctcaaaagccatgaactccgaaaggctgatgttttctggaatt
gtatcagccatgcctgttatccctggaaatgacagtaacaggggtcccag
tgttgg

gaattcactgtgtaaactaggctaactttgaactcatagcctgtccctgc
ctcttaactggtgcaagcagctcttcttggtctcagggctgcaatccatt
agctcactggaatcttctcttgcttagcaagccttcctttccgagatcag
tggattagaggacagtgctcagagagttacattatttacaaacacggggg
tggctgccggcacctgggagaaagccaagctctgaaaggtcccacaaagt
gggttgctgccctgggaactgttacagatgtgtcatagctgctgggattt
gcttttttttgtgtgagtttacttgccctaattttaaccaggacgggaga
gaaggtgctgagcgcgagaatgggtagcggcagctgtttcttttgcattg
ttgagtctagtttcttgaaatgttctgctgagacgtcttgcatttttcct
ttgagtttcatataacacacaaacttacgttttagaatttgggctgggtt
ttattttgcttttggtttgtttttatgatggctgggataacctgcagtag
agtctagaaacaacaacaaagagggttcaccaaaaggggccatgtttcta
cagggttctacctaatccgcaggtacgtgagtctgggttgggtgagtggc
aggggaggaaaggggttgccctgcttaatgcccatctaggaatatgtatt
gcttttacagctttgctggggagggatttaactagatgagcgccatttct
tgagggagctacaaccctcttatagaagggcatggaacctcctttaggac
tttggctttgttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_55167421_55168026
seq2: B6Ng01-224P11.b_48_653 (reverse)

seq1  CCAACACTGGGACCCCTGTTACTGTCATTTCCAGGGATAACAGGCATGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACACTGGGACCCCTGTTACTGTCATTTCCAGGGATAACAGGCATGGC  50

seq1  TGATACAATTCCAGAAAACATCAGCCTTTCGGAGTTCATGGCTTTTGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACAATTCCAGAAAACATCAGCCTTTCGGAGTTCATGGCTTTTGAGG  100

seq1  CTAAGTATTATTTATTGTCCTGGTCACTCTCTGTCCTTATTTAAGGCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTATTATTTATTGTCCTGGTCACTCTCTGTCCTTATTTAAGGCTGG  150

seq1  TGGCATAACAGTGCCAACATTTCCCTCTTTCATCAGCTTTAACACCTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATAACAGTGCCAACATTTCCCTCTTTCATCAGCTTTAACACCTGTG  200

seq1  CCAGCAATGTGTCAAACAAGAGGTGAGTCAGCTTTGTGGGGGCCGATGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAATGTGTCAAACAAGAGGTGAGTCAGCTTTGTGGGGGCCGATGGG  250

seq1  TCTCAGGGAAGTCAGAGTCTGCCACCGGAGAACCCTAAATATGGCTTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGGAAGTCAGAGTCTGCCACCGGAGAACCCTAAATATGGCTTGTA  300

seq1  AGCCATTGGCTACTTCACATGATCCTCTCAGAGCCCTGCTAGAGATGGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATTGGCTACTTCACATGATCCTCTCAGAGCCCTGCTAGAGATGGGT  350

seq1  AATTGTTTATTTCTTCTTTTGCTTCTACTGAAGGCTACTTGTGACCTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTTTATTTCTTCTTTTGCTTCTACTGAAGGCTACTTGTGACCTCTC  400

seq1  ACTGAAATGCTCTATAAAGAATTATGATCAGGCTCAATAGAGAGGAGTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAATGCTCTATAAAGAATTATGATCAGGCTCAATAGAGAGGAGTGC  450

seq1  TATTTTCAACTAGTAATGTCTGAGAGGTGTGAAAAAGGAACAGTTGCAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCAACTAGTAATGTCTGAGAGGTGTGAAAAAGGAACAGTTGCAAT  500

seq1  ACAGTGGAGGTCATAGACTGGGGACAGATACAGTTCCCTCCAGAAAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGGAGGTCATAGACTGGGGACAGATACAGTTCCCTCCAGAAAAATA  550

seq1  AGCAGTCATTGCCCTGTGATGAACCGGGGGCATCTAAGGGTGAGACTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTCATTGCCCTGTGATGAACCGGGGGCATCTAAGGGTGAGACTCTT  600

seq1  GAATTC  606
      ||||||
seq2  GAATTC  606


seq1: chr4_55060120_55060932
seq2: B6Ng01-224P11.g_67_879

seq1  GAATTCACTGTGTAAACTAGGCTAACTTTGAACTCATAGCCTGTCCCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTGTAAACTAGGCTAACTTTGAACTCATAGCCTGTCCCTGC  50

seq1  CTCTTAACTGGTGCAAGCAGCTCTTCTTGGTCTCAGGGCTGCAATCCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAACTGGTGCAAGCAGCTCTTCTTGGTCTCAGGGCTGCAATCCATT  100

seq1  AGCTCACTGGAATCTTCTCTTGCTTAGCAAGCCTTCCTTTCCGAGATCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCACTGGAATCTTCTCTTGCTTAGCAAGCCTTCCTTTCCGAGATCAG  150

seq1  TGGATTAGAGGACAGTGCTCAGAGAGTTACATTATTTACAAACACGGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTAGAGGACAGTGCTCAGAGAGTTACATTATTTACAAACACGGGGG  200

seq1  TGGCTGCCGGCACCTGGGAGAAAGCCAAGCTCTGAAAGGTCCCACAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGCCGGCACCTGGGAGAAAGCCAAGCTCTGAAAGGTCCCACAAAGT  250

seq1  GGGTTGCTGCCCTGGGAACTGTTACAGATGTGTCATAGCTGCTGGGATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGCTGCCCTGGGAACTGTTACAGATGTGTCATAGCTGCTGGGATTT  300

seq1  GCTTTTTTTTGTGTGAGTTTACTTGCCCTAATTTTAACCAGGACGGGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTTTTTGTGTGAGTTTACTTGCCCTAATTTTAACCAGGACGGGAGA  350

seq1  GAAGGTGCTGAGCGCGAGAATGGGTAGCGGCAGCTGTTTCTTTTGCATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTGCTGAGCGCGAGAATGGGTAGCGGCAGCTGTTTCTTTTGCATTG  400

seq1  TTGAGTCTAGTTTCTTGAAATGTTCTGCTGAGACGTCTTGCATTTTTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTCTAGTTTCTTGAAATGTTCTGCTGAGACGTCTTGCATTTTTCCT  450

seq1  TTGAGTTTCATATAACACACAAACTTACGTTTTAGAATTTGGGCTGGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTTTCATATAACACACAAACTTACGTTTTAGAATTTGGGCTGGGTT  500

seq1  TTATTTTGCTTTTGGTTTGTTTTTATGATGGCTGGGATAACCTGCAGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTGCTTTTGGTTTGTTTTTATGATGGCTGGGATAACCTGCAGTAG  550

seq1  AGTCTAGAAACAACAACAAAGAGGGTTCACCAAAAGGGGCCATGTTTCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAGAAACAACAACAAAGAGGGTTCACCAAAAGGGGCCATGTTTCTA  600

seq1  CAGGGTTCTACCTAATCCGCAGGTACGTGAGTCTGGGTTGGGTGAGTGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTTCTACCTAATCCGCAGGTACGTGAGTCTGGGTTGGGTGAGTGGC  650

seq1  AGGGGAGGAAAGGGGTTGCCCTGCTTAATGCCCATCTAGGAATATGTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAGGAAAGGGGTTGCCCTGCTTAATGCCCATCTAGGAATATGTATT  700

seq1  GC-TTTACAGCTTTGCTGGGGAGGGATTTAACTAGATGAGCGCCATTTCT  749
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTACAGCTTTGCTGGGGAGGGATTTAACTAGATGAGCGCCATTTCT  750

seq1  TGAGGGAGCTACAAACCACTTAGTAGAAGGGTATGGACCTTCCTTTAGGA  799
      |||||||||||||| || |||| |||||||| ||||| | ||||||||||
seq2  TGAGGGAGCTACAACCCTCTTA-TAGAAGGGCATGGAACCTCCTTTAGGA  799

seq1  CATTTGCTTTGTTC  813
      | || |||||||||
seq2  CTTTGGCTTTGTTC  813


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