BAC Information

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BAC

Clone NameB6Ng01-225B24
Chromosome4 (Build37)
Map Location 67,823,033 - 67,824,149
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039379, Hmgb1-rs18, LOC433715
Downstream geneTcp1-ps1, Dbc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-225B24.bB6Ng01-225B24.g
ACCGA039397GA039398
length9991,115
definitionB6Ng01-225B24.b B6Ng01-225B24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagttagtgagaattttattgaggatttttgcatcgatattcatc
aaggaaattggtctgaagttctttatctttgctgcatcttttgtggttta
ggtatcagagtaattgtggcttcaaagaatgaattgggtagagtaccttc
tgcttttattttgtggaatagtttgtgaagaactgtaattagatcttctt
taaaggtctgatagaactctgcactaaacacatctggtcctgggcttttg
ttttggttgagagactattaatggctgcttctatttctttagggtatata
ggactgtttagatcattaacctgatcctgaattaacttttgtacctggta
cctgtctagaaatttgtccatttcatccaggttttccagttttgttgagt
atagccttttgtagaaggatctgatggtgttttggatttcttcaggatct
gttgttatgtctcccttttcatttctgattttgttaattagaatggtgtc
cctgtgccctctagtgagtctggctaagggtttatctatcttgttgattt
tctcaaagaaccagctcctcatttggttgattctttgaaaagttcttctt
gtttccacttggttgatttcccccatgagtttgattatttcctgccttct
actcctcttgggtgaatttgtttccttttgttctagagcttttaggtgtg
ttgtcaagctgcttgtttgtgctctctctaatttctttttggaggcactc
agagctatgatttttcttcttagacatattttcattgtgtcccataagtt
tgggtatgttgtggtttcattttcattaaactctaaaaagtctttaattt
ctttctgtattccttccttgaccaaggtatcattgagaagagtgttgttc
agtttccacatgaatgctggctttctattatttacgttgttattgaagat
cagccttactccatggtcatctgatacgatgcatggacattttcaatat

gaattcattcattagtccccacgatagtatcctttagtggcacagtattc
tctgtaaggatttgttcaagaggagcctttggagacaatttgttaccatt
actgctttcaactttatctgtagcctacctcctgggtctgtctaaaggac
ttatttttttgcaaacatcacagattgttcctatgttctactataagaga
ggccactcccctgtctcctaaatctgagatggggctgtgtgattactctc
aagttgagagcagaaagtcaaacagaagatacctgaattagagtcttgta
cctaaagtcagcataaaaattgtgggttgcttcccttaggcttttccttc
tttgagttcagctaattaacaatatgaacctaagttgacagcattgctaa
gaaacaatactgctgtgggaggccgagaaagtactctgactgttaaattt
cttcctgttttataaatacatgcttattatagaggcaccctttgttgtct
cctacatttgggtctgacagctctcatcttcacctattgtttgtacaggt
ttcaaacatataatcaaacttgacatacaggccttgttttgttttcaaac
attaaaataaatatgttatattaacaaggccatttaaaatgaatttgtta
cttagcctcacaagcacatttaactgaaggagttccactgacaattactt
atcatgtttttacctgtttgattgttcttaaccatggacaacatggtgac
ttaacagtagtgggcaattaagatcctttactttagcactgttttaaaag
actctaacagtgaaaagcgcagctgttactttaggaaacacattcattgt
ttacatttgtccaacagtcacttgttttaaaagatatttagcactatgca
ctgggccaagaaaagggcagttgtcatttttgtcaaagctttaaaatttt
gaggaagtcaatataagttatatatctttaaaatgaatgaaaagaaagtg
tgaataagctatgtgagtgcaagagaaaaatcatgacagacatggttcag
tttccacaaaaagcagcaagagcagcaccttgttttttgttgtttgattg
gttgttgttgtttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_67823033_67824149
seq2: B6Ng01-225B24.g_65_1179

seq1  GAATTCATTCATTAGTCCCCACGATAGTATCCTTTAGTGGCACAGTATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCATTAGTCCCCACGATAGTATCCTTTAGTGGCACAGTATTC  50

seq1  TCTGTAAGGATTTGTTCAAGAGGAGCCTTTGGAGACAATTTGTTACCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAAGGATTTGTTCAAGAGGAGCCTTTGGAGACAATTTGTTACCATT  100

seq1  ACTGCTTTCAACTTTATCTGTAGCCTACCTCCTGGGTCTGTCTAAAGGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTTTCAACTTTATCTGTAGCCTACCTCCTGGGTCTGTCTAAAGGAC  150

seq1  TTATTTTTTTGCAAACATCACAGATTGTTCCTATGTTCTACTATAAGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTTTGCAAACATCACAGATTGTTCCTATGTTCTACTATAAGAGA  200

seq1  GGCCACTCCCCTGTCTCCTAAATCTGAGATGGGGCTGTGTGATTACTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACTCCCCTGTCTCCTAAATCTGAGATGGGGCTGTGTGATTACTCTC  250

seq1  AAGTTGAGAGCAGAAAGTCAAACAGAAGATACCTGAATTAGAGTCTTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGAGAGCAGAAAGTCAAACAGAAGATACCTGAATTAGAGTCTTGTA  300

seq1  CCTAAAGTCAGCATAAAAATTGTGGGTTGCTTCCCTTAGGCTTTTCCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAGTCAGCATAAAAATTGTGGGTTGCTTCCCTTAGGCTTTTCCTTC  350

seq1  TTTGAGTTCAGCTAATTAACAATATGAACCTAAGTTGACAGCATTGCTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGTTCAGCTAATTAACAATATGAACCTAAGTTGACAGCATTGCTAA  400

seq1  GAAACAATACTGCTGTGGGAGGCCGAGAAAGTACTCTGACTGTTAAATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAATACTGCTGTGGGAGGCCGAGAAAGTACTCTGACTGTTAAATTT  450

seq1  CTTCCTGTTTTATAAATACATGCTTATTATAGAGGCACCCTTTGTTGTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGTTTTATAAATACATGCTTATTATAGAGGCACCCTTTGTTGTCT  500

seq1  CCTACATTTGGGTCTGACAGCTCTCATCTTCACCTATTGTTTGTACAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACATTTGGGTCTGACAGCTCTCATCTTCACCTATTGTTTGTACAGGT  550

seq1  TTCAAACATATAATCAAACTTGACATACAGGCCTTGTTTTGTTTTCAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACATATAATCAAACTTGACATACAGGCCTTGTTTTGTTTTCAAAC  600

seq1  ATTAAAATAAATATGTTATATTAACAAGGCCATTTAAAATGAATTTGTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAATAAATATGTTATATTAACAAGGCCATTTAAAATGAATTTGTTA  650

seq1  CTTAGCCTCACAAGCACATTTAACTGAAGGAGTTCCACTGACAATTACTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCCTCACAAGCACATTTAACTGAAGGAGTTCCACTGACAATTACTT  700

seq1  ATCATGTTTTTACCTGTTTGATTGTTCTTAACCATGGACAACATGGTGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGTTTTTACCTGTTTGATTGTTCTTAACCATGGACAACATGGTGAC  750

seq1  TTAACAGTAGTGGGCAATTAAGATCCTTTACTTTAGCACTGTTTTAAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAGTAGTGGGCAATTAAGATCCTTTACTTTAGCACTGTTTTAAAAG  800

seq1  ACTCTAACAGTGAAAAGCGCAGCTGTTACTTTAGGAAACACATTCATTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAACAGTGAAAAGCGCAGCTGTTACTTTAGGAAACACATTCATTGT  850

seq1  TTACATTTGTCCAACAGTCACTTGTTTTAAAAGATATTTAGCACTATGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTTGTCCAACAGTCACTTGTTTTAAAAGATATTTAGCACTATGCA  900

seq1  CTGGGCCAAGAAAAGGGCAGTTGTCATTTTTGTCAAAGC-TTAAAATTTT  949
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTGGGCCAAGAAAAGGGCAGTTGTCATTTTTGTCAAAGCTTTAAAATTTT  950

seq1  GAGGAAGTCAAATATAAGTTATATATCTTTAAAATGAATG-AAAGAAAGT  998
      ||||||||| |||||||||||||||||||||||||||||| |||||||||
seq2  GAGGAAGTC-AATATAAGTTATATATCTTTAAAATGAATGAAAAGAAAGT  999

seq1  GTGAATAAGCTATGTGAGTGCAAGAGAAAAATCATGACAGACAATGGTCA  1048
      |||||||||||||||||||||||||||||||||||||||||| |||||  
seq2  GTGAATAAGCTATGTGAGTGCAAGAGAAAAATCATGACAGAC-ATGGTTC  1048

seq1  GGTTTCCACAAAAGCAAGCAAAGAAGCAGGCAACCTG-TTTTTGTTGTTT  1097
       ||||||||||||   |||||   |||| ||| | || ||||||||| ||
seq2  AGTTTCCACAAAAAGCAGCAA--GAGCA-GCACCTTGTTTTTTGTTG-TT  1094

seq1  TGATT-GTTGTTGTTGTTTTA  1117
      ||||| |||||||||||||||
seq2  TGATTGGTTGTTGTTGTTTTA  1115


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