BAC Information

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BAC

Clone NameB6Ng01-225D12
Chromosome4 (Build37)
Map Location 70,301,506 - 70,302,455
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC622491, LOC433716, LOC100039888, LOC242497, LOC671064, Cdk5rap2, Megf9
Downstream geneLOC100039565, LOC100039979
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-225D12.bB6Ng01-225D12.g
ACCGA039469GA039470
length1,1091,021
definitionB6Ng01-225D12.b B6Ng01-225D12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcaagctcagcccaatgtttggttttgggtctctgcatctgtt
atgatcagtttctgggtgatgtttcccagatgacagtatgtcatgtgtct
tctgaaagtatagcagactatcaataaaagtttcagggttggttctctct
catggcataagtctgaagctgggccagtcattggttggtcattccttcaa
tctctgatcctttaccactgcacatcatgttggtaggagaaactgtgggt
ctaaggttttgtggctgggctggtatactagtttctccattggaaatctt
ttctggccataggagatggtcatttcaggctctacatctttcattgctag
gaatcccagctagggtcacccttacacattcccaagagcctccatttcct
aggttttctagcttgtcccacagataccccgcccattccagttttctctc
ccagtactttctcaactgcaccctgaattgatttctttggctcacctctc
caggccttttcacacctcattcccctcccttcattcatcactgatgtcca
ctctatttccccttctccatgagattccccttctcatgtctggtattgaa
atctttgttaggtggtctttgactcttagaaggagtgccatttggattat
atatatatatataatatattcattcatatatattcattatatatatatat
atatatatatatatatatatatatatatatatattcattgcattgcatgc
agtaatttttaaagtcaaatagctaaattttatggttcttgatggctttc
agtcatcaattttgtttattttcctcccctctctcctttgtcttgtatta
aactcccccccccccctataaaggagcccctgccatcccccctttttcct
atcagttcacttgtatcattcttattacccctttatcccttctctcaagc
tttcttctgatatttgcccttcctgcatcttgcttaaggactttcccact
tttgccacctcctctgatccgattacttggtagcatggtcattcctttcc
cgtctttggttcatcataacttcctttattcctggcagtggtgggggttc
ctgctttcc

gaattctcacctgagtaataccaaatgggtgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcaaacctgtgagaatggctaagattaaaaattcaggtgacagc
agatgctggtgaggatgtggagaaagaggaacactcctccagtgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggctgatcctca
gataattggacatagtactaccggaggatctcgcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcattacagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatatggtacatttacacaatg
gattactactcagttatcaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaagtaatgcaatcccaaa
gaactcacacaatatgttatcactgataagtgaatattagcccagaaact
tagaatacccatgatataagatgcaatttgcaaaactcatgaaactcaag
aagaaagaagaccaaagtgtggacactttgtcccttcttagacttgggaa
caaaacacccatggtaggagttacaaacacaaagtttggagctgagacga
aaggatggaccatctagaaactgccatatccggggatccatcccataatt
gtggagagccgtgctgcgagcaatcgccattataaaatggtgctggctta
cgctgtgcctaactagtaaacaagcctgtgcgcaagtgtgaagtgaactc
atgcctagtcactgcccatctcggggcgtagtaatgaggtgatgggcgag
caacaaatcaggagctgacatgccacatcaggtgctgaaacgccacgctg
agggctatatagcagcaccat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_70301506_70302455
seq2: B6Ng01-225D12.b_181_1153

seq1  GGTTGGTTCTCTCTCATGGCATAAGTCTGAAGCTGGGCCAGTCATTGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGTTCTCTCTCATGGCATAAGTCTGAAGCTGGGCCAGTCATTGGTT  50

seq1  GGTCATTCCTTCAATCTCTGATCCTTTACCACTGCACATCATGTTGGTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATTCCTTCAATCTCTGATCCTTTACCACTGCACATCATGTTGGTAG  100

seq1  GAGAAACTGTGGGTCTAAGGTTTTGTGGCTGGGCTGGTATACTAGTTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACTGTGGGTCTAAGGTTTTGTGGCTGGGCTGGTATACTAGTTTCT  150

seq1  CCATTGGAAATCTTTTCTGGCCATAGGAGATGGTCATTTCAGGCTCTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGGAAATCTTTTCTGGCCATAGGAGATGGTCATTTCAGGCTCTACA  200

seq1  TCTTTCATTGCTAGGAATCCCAGCTAGGGTCACCCTTACACATTCCCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCATTGCTAGGAATCCCAGCTAGGGTCACCCTTACACATTCCCAAG  250

seq1  AGCCTCCATTTCCTAGGTTTTCTAGCTTGTCCCACAGATACCCCGCCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCCATTTCCTAGGTTTTCTAGCTTGTCCCACAGATACCCCGCCCAT  300

seq1  TCCAGTTTTCTCTCCCAGTACTTTCTCAACTGCACCCTGAATTGATTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTTTTCTCTCCCAGTACTTTCTCAACTGCACCCTGAATTGATTTCT  350

seq1  TTGGCTCACCTCTCCAGGCCTTTTCACACCTCATTCCCCTCCCTTCATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTCACCTCTCCAGGCCTTTTCACACCTCATTCCCCTCCCTTCATTC  400

seq1  ATCACTGATGTCCACTCTATTTCCCCTTCTCCATGAGATTCCCCTTCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTGATGTCCACTCTATTTCCCCTTCTCCATGAGATTCCCCTTCTCA  450

seq1  TGTCTGGTATTGAAATCTTTGTTAGGTGGTCTTTGACTCTTAGAAGGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGGTATTGAAATCTTTGTTAGGTGGTCTTTGACTCTTAGAAGGAGT  500

seq1  GCCATTTGGATTATATATATATATATAATATATTCATTCATATATATTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTTGGATTATATATATATATATAATATATTCATTCATATATATTCA  550

seq1  TTATATATATATATATATATATATATATATATATATATATATATATATAT  600
      |  |||||||||||||||||||||||||||||||||||||||||||||||
seq2  T--TATATATATATATATATATATATATATATATATATATATATATATAT  598

seq1  TCATTGCATTGCATGCAGTAATTTTTAAAGTCAAATAGCTAAATTTTATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGCATTGCATGCAGTAATTTTTAAAGTCAAATAGCTAAATTTTATG  648

seq1  GTTCTTGATGGCTTTCAGTCATCAATTTTG-TTATTTTCCT-CCCTCTCT  698
      |||||||||||||||||||||||||||||| |||||||||| ||||||||
seq2  GTTCTTGATGGCTTTCAGTCATCAATTTTGTTTATTTTCCTCCCCTCTCT  698

seq1  CC-TTGTCTTGTATTTAACT--CCCCCCCCCCTAT-AAGGAGCCCCTG-C  743
      || |||||||||||| ||||  ||||||||||||| |||||||||||| |
seq2  CCTTTGTCTTGTATTAAACTCCCCCCCCCCCCTATAAAGGAGCCCCTGCC  748

seq1  ATCCCCC--TTTTCCTATCAGTTCACTTGTATCATTC-TATTA-CCCTTT  789
      |||||||  |||||||||||||||||||||||||||| ||||| ||||||
seq2  ATCCCCCCTTTTTCCTATCAGTTCACTTGTATCATTCTTATTACCCCTTT  798

seq1  AT-CCTTCTCTC-AGC-TTCTTCTG-TATTTG-CCTTCCTGCATCTTGC-  833
      || ||||||||| ||| |||||||| |||||| |||||||||||||||| 
seq2  ATCCCTTCTCTCAAGCTTTCTTCTGATATTTGCCCTTCCTGCATCTTGCT  848

seq1  TAAGGACTTTCCCAC-TTTGCCA-CTTCTCTGATCCGATTACTT-GTAGC  880
      ||||||||||||||| ||||||| || ||||||||||||||||| |||||
seq2  TAAGGACTTTCCCACTTTTGCCACCTCCTCTGATCCGATTACTTGGTAGC  898

seq1  ATGTTC-TTCCTTTCTCGTCTCTGTTTCATCATAACTTCCTT--ATCCTG  927
      ||| || |||||||| ||||| || |||||||||||||||||   |||||
seq2  ATGGTCATTCCTTTCCCGTCTTTGGTTCATCATAACTTCCTTTATTCCTG  948

seq1  GCAGTGTTGGTG--TTCTGCTTTCC  950
      |||||| ||| |  | |||||||||
seq2  GCAGTGGTGGGGGTTCCTGCTTTCC  973


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