BAC Information

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BAC

Clone NameB6Ng01-225P24
Chromosome4 (Build37)
Map Location 78,180,381 - 78,181,350
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039974, LOC100039996
Downstream geneLOC100040026, LOC100040036, LOC667922
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-225P24.bB6Ng01-225P24.g
ACCGA040052GA040053
length1,0441,165
definitionB6Ng01-225P24.b B6Ng01-225P24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtctc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcac
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtcttttctattcttgaatcaatattctgaattttgtgcccct
tccaagattctatctcaaaaatttccaaattaattatttatgtcacatgc
aagataatgtttatgtgaaaatcttttaatttatgaaaaatattaaaatg
tagaagtaaaaaattctgctactgcaggcagtctacttcatgtgtgtgta
gaacacaactcagtcttgcctaaagtgtgaagagagactatactatgtag
tttctgtcttggaatgagatgttagcaggaaaaattgtgggaggaaatga
gtattatgtgactaagggcagtcagaccttaagtagaaagaattatgaca
cttggaatataacacaactgaaattttaataataaaataaataatgaaat
gttggcagctattttctactactcttcttccccttgaccactttcttctt
tctgtttaagccagacttactggcttaatcaaaagttcatggaa

gaattccatggcccttctgtcctgtgccttctgacatggcagatcaccag
catgtctgatccactgaagacaccacagcctgaaggcctcacaggagttc
tgctgcagacagggcaacagacccatcagtctgaaagtgtctctggagtt
cagatgcacacgggacaggaggttctgtagtctgaaggcctccctacaga
acagctacatgcaggtcaacagcttgtctgctcctctgaagacccaacag
tctgatgccctccaaaaagagcaattgcagccagggcaataggtcactgg
aatatgcaaccctcggaagacctcacagtctgaaagtctcacaggaagtc
tgctacagtcagggccacaggcctcccaggagacctgcaataacctggga
cataggaagcaggctccagacagagacaccaagaccagcgaacaccaggg
ataaccagaaagctagagccaagtgcaagaccataagcaacagaagccaa
tgtactttgacatcatgagaacccagttctcacacaaaagaaagccttgg
atactccaactcacctgaaaatcaggaagctgacctaaaattctatctca
tgaatataatagaatccttaaaggaggatataaataacatactgaaagaa
ataaagaaaatacaggtaaacagttagaagtccttaatgaggaaacaaat
aaatcacttaaagaaatagaggaaaacccaatcaaacaggtgaaggaatt
gaacaaagtggtccaaaactaaaaagtagaagtagaaacaataaagaaaa
cacaaatggaggcaacccttgaaatggaaaacctaggaaagaggacagga
attacagatgtaagtatcaccaacagaatacaagaaataaaaaacaaagt
cacagtgtaaaagatactttagaagatattgacatggctgtcaaagaaat
tcaaaacataaaaaaatcctaacccaaaacagccaggaattccagacaca
atgaaaagacccaatataggatatagatagaggagatggaggattcctag
ctcaaagaactcaaaaaaaaaaaaaaagtctttgaaaagaagaacatagg
aaaaaactcttcaacctaaggaaccggaatagtctataatgttacaagag
aagcccttatatgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_78180381_78181350
seq2: B6Ng01-225P24.b_114_1089

seq1  TGAGTTCTTTATATATGTTGGATATTAGTCTCCTATCTGATTTAGGATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCTTTATATATGTTGGATATTAGTCTCCTATCTGATTTAGGATAG  50

seq1  GTAAAGATCCTTTCCCAATCTGTTGGTGGTCTTTTTGTCTTATTGACGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGATCCTTTCCCAATCTGTTGGTGGTCTTTTTGTCTTATTGACGGT  100

seq1  GTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAGGTCCCATTTGTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAGGTCCCATTTGTCAA  150

seq1  TTCTCGATCTTACAGCACAAGCCATTGCTGTTCTGTTCAGGAATTTTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCGATCTTACAGCACAAGCCATTGCTGTTCTGTTCAGGAATTTTTCC  200

seq1  CCTGTGCCCATATCTTCAAGGCTTTTCCCCACTTTCTCCTCTATAAGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGCCCATATCTTCAAGGCTTTTCCCCACTTTCTCCTCTATAAGTTT  250

seq1  CAGTGTCTCTGGTTTTATGTGAAGTTCCTTGATCCACTTAGATTTGACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTCTCTGGTTTTATGTGAAGTTCCTTGATCCACTTAGATTTGACCT  300

seq1  TAGTACAAGGAGATAAGTATGGATCGATTCACATTCTTCTACACGATAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACAAGGAGATAAGTATGGATCGATTCACATTCTTCTACACGATAAC  350

seq1  AACCAGTTGTGCCAGCACCAATTGTTGAAAATGCTGTCTTTCTTCCACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGTTGTGCCAGCACCAATTGTTGAAAATGCTGTCTTTCTTCCACTG  400

seq1  GATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGACCATAGGTGTGTGGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGACCATAGGTGTGTGGGT  450

seq1  TCATTTCTGGGTCTTCAATTCTATTCCATTGGTCTACTTGTCTTTTCTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCTGGGTCTTCAATTCTATTCCATTGGTCTACTTGTCTTTTCTAT  500

seq1  TCTTGAATCAATATTCTGAATTTTGTGCCCCTTCCAAGATTCTATCTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAATCAATATTCTGAATTTTGTGCCCCTTCCAAGATTCTATCTCAA  550

seq1  AAATTTCCAAATTAATTATTTATGTCACATGCAAGATAATGTTTATGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCCAAATTAATTATTTATGTCACATGCAAGATAATGTTTATGTGA  600

seq1  AAATCTTTTAATTTATGAAAAATATTAAAATGTAGAAGTAAAAAATTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTTTAATTTATGAAAAATATTAAAATGTAGAAGTAAAAAATTCTG  650

seq1  CTACTGCAGGCAGTCTACTTCATGTGTGTGTAGAACACAACTCAGTCTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGCAGGCAGTCTACTTCATGTGTGTGTAGAACACAACTCAGTCTTG  700

seq1  CCTAAAGTGTGAAGAGAGACTATACTATGTAG-TTCTGTCTTGGAATGAG  749
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CCTAAAGTGTGAAGAGAGACTATACTATGTAGTTTCTGTCTTGGAATGAG  750

seq1  ATGTTAGCAGGAAAAATTGTGGGAGGAAATGAGTATTATGTGACTAAGGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATGTTAGCAGGAAAAATTGTGGGAGGAAATGAGTATTATGTGACTAA-GG  799

seq1  GCAGTCAGACCTAAGGTAGAAGGAA-TAAGACACTTGGAATATAAACACA  848
      |||||||||||| | |||||| ||| || |||||||||||||| ||||||
seq2  GCAGTCAGACCTTAAGTAGAAAGAATTATGACACTTGGAATAT-AACACA  848

seq1  ACTGAAA-TTTAATATAAAAATAAATAATGAAATGTTGGCAGCTATTTTC  897
      ||||||| |||||||  |||||||||||||||||||||||||||||||||
seq2  ACTGAAATTTTAATAATAAAATAAATAATGAAATGTTGGCAGCTATTTTC  898

seq1  TACTACTCTTCTT-CCCTTGACCACTTTTCTC-TTCTG-TTAAGCCAGAC  944
      ||||||||||||| ||||||||||||||  || ||||| |||||||||||
seq2  TACTACTCTTCTTCCCCTTGACCACTTTCTTCTTTCTGTTTAAGCCAGAC  948

seq1  -TACTTGC-TAATCAAAAGTTCATGGAA  970
       |||| || |||||||||||||||||||
seq2  TTACTGGCTTAATCAAAAGTTCATGGAA  976


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