BAC Information

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BAC

Clone NameB6Ng01-228C23
Chromosome4 (Build37)
Map Location 138,135,998 - 138,136,356
singlet/doubletsinglet
Overlap gene4931403E03Rik
Upstream geneUsp48, Rap1gap, Akp2, Ece1, LOC100040558, Eif4g3, Hp1bp3, Kif17, Ddost, Pink1, Cda, LOC625638, LOC625646, 0610009K11Rik, Camk2n1, LOC100040618
Downstream geneUbxd3, Pla2g2c, Pla2g2f, Pla2g2d, Pla2g5, Pla2g2a, Pla2g2e, Otud3, Rnf186, Tmco4, Htr6, LOC665683, Nbl1, 2310028O11Rik, Hspe1-ps4, 9530077C14Rik, Capzb, Pqlc2, LOC100042808, Akr7a5, LOC625977, LOC626000, Mrto4, C230096C10Rik, Zubr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-228C23.bB6Ng01-228C23.g
ACCGA041657GA041658
length677359
definitionB6Ng01-228C23.b B6Ng01-228C23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaccatctcttttcatgagagttgtcttagtgggcgtgaggca
gtttctcatggctgccttgatttgtatttttctagtgactaacaacgtta
aacgcctttccatggtcatcactttatcttatgcggagaagcaactgttc
caggtctttgtcattttgaaatcgggttggtttcgctttactgctgactc
gtgagagtccttgtatgtttgtctacagtctacgacacacatgattttct
gccaccctgtggcttacatttttacttttttttttttttttttgagagta
tggtttgaagcacaggattttaaattccggtgaaaacccaatttagtttt
aatatctcttgtgctgttgtgacacgatttaagaagccattacctaatcc
aatgccattgagatttactcccccactttcttctaagacttttttttccc
tttcaagtttcatttgcttgtctgatgcagggtcttgctatgcaacccag
gctggcctctactcattggtgagtcagtctcctgcctttgcttcctcagt
actgggaccataaccacacaccatcatacctggatgctttctaaagcctt
ataccttacatgtaggtttctgaatcatattgagagagagagagagagag
agagagagagagagagagagagagaga
aagcgtttctgaacaggacttatttaattagctgtgtaattgtttgatta
atgctggcctctcttagccagtgtcaggtgccccgggaaaggatgtgctc
actttattctatgctaaccaaccctccggaggcgtctgtggggccaaaca
cctagcctggccccccgctgactgtgggggagtcattggggctgatgaga
atgggcaggatctaggctaggtctaggggccctctgggaaggttcaacct
cagaggatctcctatcattgttgaccctccagaaccagatatgagtcacc
cagagaaatgctgggtatgagggagcatgggggtgggcaagtgtggtagg
agaggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_138135998_138136356
seq2: B6Ng01-228C23.g_75_433

seq1  AAGCGTTTCTGAACAGGACTTATTTAATTAGCTGTGTAATTGTTTGATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCGTTTCTGAACAGGACTTATTTAATTAGCTGTGTAATTGTTTGATTA  50

seq1  ATGCTGGCCTCTCTTAGCCAGTGTCAGGTGCCCCGGGAAAGGATGTGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGGCCTCTCTTAGCCAGTGTCAGGTGCCCCGGGAAAGGATGTGCTC  100

seq1  ACTTTATTCTATGCTAACCAACCCTCCGGAGGCGTCTGTGGGGCCAAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATTCTATGCTAACCAACCCTCCGGAGGCGTCTGTGGGGCCAAACA  150

seq1  CCTAGCCTGGCCCCCCGCTGACTGTGGGGGAGTCATTGGGGCTGATGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCCTGGCCCCCCGCTGACTGTGGGGGAGTCATTGGGGCTGATGAGA  200

seq1  ATGGGCAGGATCTAGGCTAGGTCTAGGGGCCCTCTGGGAAGGTTCAACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCAGGATCTAGGCTAGGTCTAGGGGCCCTCTGGGAAGGTTCAACCT  250

seq1  CAGAGGATCTCCTATCATTGTTGACCCTCCAGAACCAGATATGAGTCACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGATCTCCTATCATTGTTGACCCTCCAGAACCAGATATGAGTCACC  300

seq1  CAGAGAAATGCTGGGTATGAGGGAGCATGGGGGTGGGCAAGTGTGGTAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAATGCTGGGTATGAGGGAGCATGGGGGTGGGCAAGTGTGGTAGG  350

seq1  AGAGGAGGA  359
      |||||||||
seq2  AGAGGAGGA  359