BAC Information

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BAC

Clone NameB6Ng01-228F14
Chromosome4 (Build37)
Map Location 64,632,474 - 64,633,438
singlet/doubletsinglet
Overlap genenone
Upstream geneTnc
Downstream genePappa, Astn2, Trim32
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-228F14.bB6Ng01-228F14.g
ACCGA041783GA041784
length1,196984
definitionB6Ng01-228F14.b B6Ng01-228F14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaatatg
ttcaacaaccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtaaaaccactctggaaatcagtctggtgtttcctca
gaaaattggacatagtactaccggaagatccagcaatacctcttctgggc
atatatccagaagatgtcccaaccagtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaacg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
ggaactcgcacaatatgtactcgctgataagtggatattagctcagaaac
ttaggatacacaagatataagatacaattttgctaaacgcatgaaactca
agaggaatgaagatcaaagtgtggccactttgccccttcttagaaatggg
aacaaaacacccatggaaggagttacagagacaaagtttggagctgtgat
gaaaggatggaccatctagagacggccatatccagggatccatcccataa
tcagattctaaatgctgacaccattacatacacttagcaagattttgctg
aaatgacccagatatagctgtttcttgtgagactatgccagggcctagca
aaacacagaagtggatgctcaaagtcagctattggatggatcacaggggc
ccccaatggaaggagcttagagaaagtacccaaggagcttaaagggatct
tgctacccttgtaggtgaaacaacattatgaactacccagtatccccaga
agctctggactctagcctgcaatatatttcaaagatggcctagttcgcca
tcactggcaaaagaggcccatagaacatgccatacctttaatatgcccag
tacaggtaacgccaaggtcaaaaaaatggtaattgggtggtagtat
gaattctagaatacaggctgaagaacctatgtcttcatggagcatgctag
tctcagagcagatagaagcagctccaaaatgcaaataaaattttgctata
tctcatagggcttcaataagcagcagatatatcatacttatttctgtcta
tgtccctttgtctcaattaaatgcaaagtgtggttcaagtcattgtatct
ggacagaacaatcagcaaccagcaccagaaacagattggtaaggttaggg
agggtgtactggctagttttgtgtcaacttgacacagctggagttatcac
agagaaaggagcttcagttgaggaaatgcctccatgagatccaactgtat
ggcattttctcaattagtgatcaagggggaaaggccccttgtgggtggga
ccatctctgggctggtagtcttgggttctataagacagcaggctgagcaa
gccaggtgaggcaagccagtaaagagcatccctccatggcctctgaacca
gctcttgcttcctgacctgtttgagttccagtcctgacttcctttggtga
tgaacagcagtatggaagtgtaagctgaataaaccctttcctctccaact
tgcttcttggtcatgatgtttgtgcaggaatagaaaccctgactaagaca
gaggggatgacaaatttggaggaaaaaaaaaccagtatatcttggaaaag
ctggtatatatgaagttgtgaggttatatgtctttctcaataggtaggtc
ctttcatgatatgggcaaggtgcttgggtctcctaataagttggtccaaa
tgcacagggtttccaattaagtttgtactgtattctatacccaagcagaa
ttctagattctagatagcaaatggaggaatcgtttgtccagttggtcaaa
tttttattataataaattggatcccagagaaaatctttttttccataatg
agacagtcggttacagataattaaatgacagtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_64632474_64633438
seq2: B6Ng01-228F14.g_68_1051 (reverse)

seq1  ATACTGTCATTT-ATTATCTGTA--CCACTGTCTCATTTTG---AAAAAG  44
      |||||||||||| ||||||||||  | ||||||||||| ||   ||||||
seq2  ATACTGTCATTTAATTATCTGTAACCGACTGTCTCATTATGGAAAAAAAG  50

seq1  ATTTTCTCTGGGATCCACTTTATTATATTAAAA--TTGA-CAACTGGAC-  90
      ||||||||||||||||| ||||||||| |||||  |||| ||||||||| 
seq2  ATTTTCTCTGGGATCCAATTTATTATAATAAAAATTTGACCAACTGGACA  100

seq1  AACGATTCCT-CATTTGCT-TCTTAGATCTAGAATTCTGCTTGGGTATAG  138
      |||||||||| |||||||| |||   ||||||||||||||||||||||||
seq2  AACGATTCCTCCATTTGCTATCTAGAATCTAGAATTCTGCTTGGGTATAG  150

seq1  -ATACAGTAC-AACTTAAT--GGAACCCTGTGCATTTGGACC-ACTTATT  183
       ||||||||| ||||||||  | ||||||||||||||||||| |||||||
seq2  AATACAGTACAAACTTAATTGGAAACCCTGTGCATTTGGACCAACTTATT  200

seq1  AGGAGACCCAAGCACCTTGCCCATATCATGAAAGGACCTACCTATTGAG-  232
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGGAGACCCAAGCACCTTGCCCATATCATGAAAGGACCTACCTATTGAGA  250

seq1  AAGACATATAACCTCACAACTTCATATATACCAGCTTTTCCAAGATATAC  282
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATATAACCTCACAACTTCATATATACCAGCTTTTCCAAGATATAC  300

seq1  TGGTTTTTTTTTCCTCC-AATTTGTCATCCCCTCTGTCTTAGTCAGGGTT  331
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TGGTTTTTTTTTCCTCCAAATTTGTCATCCCCTCTGTCTTAGTCAGGGTT  350

seq1  TCTATTCCTGCACAAACATCATGACCAAGAAGCAAGTTGGAGAGGAAAGG  381
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTCCTGCACAAACATCATGACCAAGAAGCAAGTTGGAGAGGAAAGG  400

seq1  GTTTATTCAGCTTACACTTCCATACTGCTGTTCATCACCAAAGGAAGTCA  431
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTCAGCTTACACTTCCATACTGCTGTTCATCACCAAAGGAAGTCA  450

seq1  GGACTGGAACTCAAACAGGTCAGGAAGCAAGAGCTGGTTCAGAGGCCATG  481
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGGAACTCAAACAGGTCAGGAAGCAAGAGCTGGTTCAGAGGCCATG  500

seq1  GAGGGATGCTCTTTACTGGCTTGCCTCACCTGGCTTGCTCAGCCTGCTGT  531
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGATGCTCTTTACTGGCTTGCCTCACCTGGCTTGCTCAGCCTGCTGT  550

seq1  CTTATAGAACCCAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGG  581
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAGAACCCAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGG  600

seq1  CCTTTCCCCCTTGATCACTAATTGAGAAAATGCCATACAGTTGGATCTCA  631
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCCCCTTGATCACTAATTGAGAAAATGCCATACAGTTGGATCTCA  650

seq1  TGGAGGCATTTCCTCAACTGAAGCTCCTTTCTCTGTGATAACTCCAGCTG  681
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGCATTTCCTCAACTGAAGCTCCTTTCTCTGTGATAACTCCAGCTG  700

seq1  TGTCAAGTTGACACAAAACTAGCCAGTACACCCTCCCTAACCTTACCAAT  731
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAGTTGACACAAAACTAGCCAGTACACCCTCCCTAACCTTACCAAT  750

seq1  CTGTTTCTGGTGCTGGTTGCTGATTGTTCTGTCCAGATACAATGACTTGA  781
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTCTGGTGCTGGTTGCTGATTGTTCTGTCCAGATACAATGACTTGA  800

seq1  ACCACACTTTGCATTTAATTGAGACAAAGGGACATAGACAGAAATAAGTA  831
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACACTTTGCATTTAATTGAGACAAAGGGACATAGACAGAAATAAGTA  850

seq1  TGATATATCTGCTGCTTATTGAAGCCCTATGAGATATAGCAAAATTTTAT  881
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATATCTGCTGCTTATTGAAGCCCTATGAGATATAGCAAAATTTTAT  900

seq1  TTGCATTTTGGAGCTGCTTCTATCTGCTCTGAGACTAGCATGCTCCATGA  931
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATTTTGGAGCTGCTTCTATCTGCTCTGAGACTAGCATGCTCCATGA  950

seq1  AGACATAGGTTCTTCAGCCTGTATTCTAGAATTC  965
      ||||||||||||||||||||||||||||||||||
seq2  AGACATAGGTTCTTCAGCCTGTATTCTAGAATTC  984