MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-230M19
Chromosome	4 (Build37)
Map Location	20,700,123 - 20,701,219
singlet/doublet	singlet
Overlap gene	E130310K16Rik
Upstream gene	Slc7a13, Atp6v0d2, LOC667282, Ttpa, LOC667301, EG664800
Downstream gene	Prdm13, Ccnc, 2610029I01Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	Slc7a13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74087 MGI:1921337
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp6v0d2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242341 MGI:1924415
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667282 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667282
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Ttpa (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50500 MGI:1354168
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667301 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667301
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG664800 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664800 MGI:3645981
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	E130310K16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269513 MGI:2444830
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prdm13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230025 MGI:2448528
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccnc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:51813 MGI:1858199
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2610029I01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77032 MGI:1924282
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 63 ESTs, 1 Protein

name	Slc7a13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31980773 GeneID:74087 MGI:1921337
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 7, (cationic amino acid transporter, y+ system) member 13 transcript_id : NM_028746.2

name	Atp6v0d2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366331 GeneID:242341 MGI:1924415
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATPase, H+ transporting, lysosomal V0 subunit D2 transcript_id : NM_175406.2

name	Ttpa (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354109 GeneID:50500 MGI:1354168
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tocopherol (alpha) transfer protein transcript_id : NM_015767.2

name	LOC667301 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252055 GeneID:667301
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gamma-glutamyl hydrolase transcript_id : XM_989632.2

name	E130310K16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:50054089 GeneID:269513 MGI:2444830
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA E130310K16 gene transcript_id : NM_172987.2

name	Prdm13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124107611 GeneID:230025 MGI:2448528
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PR domain containing 13 transcript_id : NM_001080771.1

name	Ccnc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802414 GeneID:51813 MGI:1858199
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin C transcript_id : NM_016746.2

name	2610029I01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149252110 GeneID:77032 MGI:1924282
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 63 ESTs, 1 Protein product : RIKEN cDNA 2610029I01 gene transcript_id : XM_001474504.1

name	Slc7a13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20270204 CCDS:CCDS17993.1 GeneID:74087 MGI:1921337
definition	codon_start : 1 product : aspartate/glutamate transporter 1 protein_id : NP_083022.1

name	Atp6v0d2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29150255 CCDS:CCDS17994.1 GeneID:242341 MGI:1924415
definition	GO_function : GO:0046933 - hydrogen-transporting ATP synthase activity, rotational mechanism [Evidence IEA]; GO:0046961 - hydrogen-transporting ATPase activity, rotational mechanism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : vacuolar proton-translocating ATPase d subunit d2; ATPase, H+ transporting, V0 subunit D, isoform 2 product : ATPase, H+ transporting, V0 subunit D isoform 2 protein_id : NP_780615.1

name	Ttpa (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33468963 CCDS:CCDS17995.1 GeneID:50500 MGI:1354168
definition	GO_component : GO:0005737 - cytoplasm [Evidence TAS] GO_function : GO:0008431 - vitamin E binding [Evidence TAS] GO_process : GO:0007566 - embryo implantation [Evidence IMP]; GO:0042360 - vitamin E metabolism [Evidence IMP] codon_start : 1 note : alpha TTP product : tocopherol (alpha) transfer protein protein_id : NP_056582.1

name	LOC667301 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94371480 GeneID:667301
definition	codon_start : 1 product : gamma-glutamyl hydrolase protein_id : XP_994726.1

name	E130310K16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:50054090 CCDS:CCDS17997.1 GeneID:269513 MGI:2444830
definition	codon_start : 1 product : hypothetical protein LOC269513 protein_id : NP_766575.2

name	Prdm13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124107612 GeneID:230025 MGI:2448528
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : PR domain containing 13 protein_id : NP_001074240.1

name	Ccnc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7949016 CCDS:CCDS17998.1 GeneID:51813 MGI:1858199
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : cyclin C protein_id : NP_058026.1

name	2610029I01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149252111 GeneID:77032 MGI:1924282
definition	codon_start : 1 product : hypothetical protein LOC77032 protein_id : XP_001474554.1

name	LOC667282 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667282
definition	number : 1 pseudo : _no_value

name	EG664800 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664800
definition	number : 1 pseudo : _no_value

clone name	MSMg01-503F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125J12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-294I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164O07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-537E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-211J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-204B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494K11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-376J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545I23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-074I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350L23
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-230M19.b	B6Ng01-230M19.g
ACC	GA043570	GA043571
length	1,194	1,097
definition	B6Ng01-230M19.b	B6Ng01-230M19.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctcacctgaagaataactaatggctgagaagcacctgaaaaaatg ttcaacatccttaatcatcagggaaatgcaaatcaaaacaatcctgagat tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg ggattgcaagcttgtaaaactactctggaaatcagtctggcggtgcctca gaaaattggtcatagtactaccagaggatccaacaatacctctcctgggc atgtatccagaagatgttccaactggtaagaaagacacatgctccactat gtgtcttcatagcagccttatttataatagccagaagctgtaatgaaccc aaatgtccctcaacagaggaatggatacagaaaatgtggtgcatttacac aatggagtactactcagctattaaaaagaatgaatttatgaaattcctag gcaaatggatggacctggagggcatcatccttagtgaggtaacccaatca caaaagaactcacacattatgtactcactgataagtggatattaacccac aaacttagaatagccaagatataagatacaatttgctaaacacatgaaac tcaagaagaacgaagaccaaagtgtggacactttgtcccttcttagaatt gggaacaaaagacccatggaaggagttacagagacacagtttggagctga gacgaaacgatggaccatctagagactgccatatccggggatccatccca taatcagccttcaaaagctgacaccattgcatacactaacaagattttgc tgaaaggaccctgatatagctgtctcttttgagacaatgttggggcctag caaacacagaagtggatgcccacagtcagctattggatggatcacagggc cccaatggaggagctagagaaagtaaccaaggagctaaagggatctgcaa cctataggtggaacaacaatatgaactaccagtattccccagagctcatg tctctagctgcatatgtatcagagatgcctagtgtcatcatgaaagagag gcattgtcgtgcaaacttactgcctcagtacaggtatgccacgcagattg gaaaggctgcttgacatacgagtgcgcgagtgggtggtgactat	gaattcttaatttttgttgtctttatttcaatattctggctcatcttatg aaacttaagaaggttaagagattcattaatttatgactagtaatgagaca ttagaattggtgtagaaatcacctttcataagccaaggctgagagctgac ctacacatcaagtacacaagaatgtgctatgctgttaaaaaatgtggggc cacaggaaatattgaaagtagaagggggattgtctgggaagagaaaagag cagcaggagtgaagggattcaagacaggatagataatagggggctgaaaa tagtcaaaatacattctatgtatgaaaatgtagtgagatccgtttagttt gggttctctaaaggaacagaactatggtaaatttgcacaaaataggcatg caaatacagaggaagataaagggagaggctactgattatgtcgctgggct actatgaccatggcctcaggccatcacgttcagaaactgcagacaatcca ccaggagctagaaagaggcatagtgcttcttaccagcctcatggcctccc ttataggggtggttggaccttgatatcagggtcatacaagagatctatga ggggcaatctgattgaatattatgaggtgcaccaagatttggatgggctg tcattcaaattaggtaagttctttgggttggaaaaatttggacagactgg acttctctcaaggctgtctaccagaggcttcatttctgaaggtaaacaga aaggagctgcatccttggctcagagttggctgactccccagctctgactg cactgtccctctggagttcctaaactctagctcttgcacatgtgattctc tcccttggaggcttactgactatcgagcaacggggtcagtctgtaggact cctagagtactgtgtttccattctggtcaggtttattactgatacacagc atccagactgtgtgtgtcaagctcagtgcaccttctctgtgttgtctgag cattcctttgagctatatccattagaaggagtcagaatgagaaggacagt cagtcagtgatggtttattacaggacaggactgctgttgtgtgtaga
quality values	Open. Hide. 41 26 27 25 58 58 58 26 20 58 62 62 62 31 62 62 62 39 42 62 62 62 62 47 62 62 62 49 62 62 31 37 11 37 25 20 31 36 39 34 38 28 31 62 62 62 62 59 59 59 59 62 59 59 62 62 59 62 62 62 62 59 62 62 62 59 62 62 59 59 62 62 54 54 59 59 59 59 56 43 32 43 59 56 62 59 62 62 62 62 62 62 62 62 62 62 54 54 59 62 62 62 59 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 59 62 62 54 54 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 54 59 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 49 43 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 54 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 54 58 58 58 58 58 58 58 58 49 41 58 58 54 54 58 58 58 58 58 58 58 58 58 52 58 58 54 41 58 52 54 54 58 58 54 41 58 58 58 54 58 42 58 58 58 54 58 41 45 58 58 52 58 51 58 58 58 58 58 58 58 58 54 58 58 58 52 58 54 58 51 52 53 58 54 53 58 58 42 40 49 51 58 58 50 54 58 54 52 51 50 58 50 51 58 49 50 52 58 46 39 49 50 58 39 49 58 52 58 50 51 51 51 58 50 41 40 50 52 52 51 58 58 58 58 51 49 40 58 58 51 52 53 50 58 54 58 58 58 52 58 53 52 58 52 58 58 33 58 40 34 39 58 58 31 47 24 49 37 58 58 50 53 54 53 58 51 38 31 49 54 54 54 51 51 53 53 54 54 44 46 53 53 53 45 39 53 45 38 53 54 54 47 51 47 37 29 46 54 46 40 53 26 54 52 32 52 46 39 54 52 19 54 46 21 51 51 32 52 26 41 54 32 45 42 32 52 42 34 53 54 39 53 37 34 18 45 52 40 54 18 33 34 25 47 51 40 45 25 34 32 32 47 31 22 45 31 42 45 28 31 32 53 31 32 28 39 53 29 47 26 45 32 34 30 37 30 52 52 41 22 29 23 42 32 42 29 46 30 32 43 36 29 31 36 34 35 45 46 32 34 36 29 51 51 31 25 32 31 30 45 28 31 31 31 23 37 38 42 31 23 42 31 36 35 37 36 31 31 43 30 33 32 32 21 46 46 31 32 31 29 28 31 48 33 22 29 25 15 46 31 27 31 30 24 29 31 29 26 31 37 33 31 34 32 37 36 48 47 32 31 43 24 30 18 22 23 27 31 16 26 31 46 46 31 22 27 32 22 13 31 32 48 31 26 14 30 23 30 42 38 33 31 30 16 23 25 32 31 47 30 32 32 27 32 31 38 24 21 30 34 32 33 42 19 29 7 16 25 26 17 31 21 21 31 15 25 44 6 9 23 41 31 7 18 23 21 26 19 15 6 25 11 34 19 6 9 8 10 33 47 23 27 34 23 22 20 26 9 16 31 22 32 18 32 24 21 48 19 18 47 25 14 18 23 32 34 32 19 11 34 31 22 21 27 13 15 20 27 18 14 23 22 26 16 15 27 22 10 28 24 27 15 15 17 27 23 13 27 28 9 13 19 6 5 6 21 40 40 28 13 7 8 5 17 26 24 24 20 26 24 19 24 24 27 24 10 19 22 18 19 18 15 10 10 11 6 13 16 8 10 8 24 3 7 5 9 2 4 14 20 3 3 3 1 3 10 22 13 2 1 3 5 13 7 5 5 4 3 7 14 3 5 24 22 16 8 22 5 8 7 8 6 22 9 8 13 14 8 21 9 9 15 8 15 6 10 5 8 6 7 4 3 5 1 3 6 7 8 13 10 7 8 2 3 4 4 1 3 22 12 6 16 11 2 3 1 3 3 1 3 5 11 3 2 3 2 1 3 2 2 3 3 3 3 2 1 1 3 5 6 6 8 20 5 4 5 1 7 7 14 22 5 4	Open. Hide. 62 38 51 47 62 62 62 62 62 56 41 34 24 24 22 23 34 32 37 38 38 38 46 62 62 62 62 62 54 49 59 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 54 62 62 62 59 46 45 28 27 35 32 34 62 62 62 62 62 62 62 62 59 59 62 62 62 54 62 62 62 54 62 62 62 62 62 62 62 59 59 54 54 62 54 62 62 62 62 59 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 49 52 62 62 62 49 62 62 62 62 62 42 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 47 46 54 58 58 58 58 54 58 58 58 54 58 54 54 52 47 54 54 54 54 58 54 58 49 40 52 58 58 52 58 58 58 54 41 58 58 58 54 54 54 54 54 58 54 45 58 58 54 52 52 58 54 54 30 58 54 58 52 45 47 54 58 54 58 58 54 25 58 58 54 52 54 47 54 54 58 58 54 40 58 58 58 58 40 53 46 39 53 53 58 58 30 58 52 58 53 49 42 42 42 48 47 53 37 58 58 58 52 46 41 58 58 50 50 58 58 37 40 40 47 54 52 46 58 50 48 42 49 22 36 37 51 54 34 50 53 53 46 58 51 49 58 58 46 46 58 30 58 58 58 58 31 40 58 58 51 51 33 32 50 49 47 40 50 51 58 28 31 51 58 52 53 52 53 41 31 41 52 58 37 53 53 41 50 39 35 40 43 37 29 32 7 54 44 54 40 37 26 51 54 50 41 40 39 53 47 27 44 24 47 54 49 40 52 40 54 54 44 34 50 33 14 49 47 45 52 30 43 32 42 39 42 52 52 39 42 31 32 18 46 22 45 53 33 35 34 52 38 29 19 37 31 54 54 37 35 30 52 35 29 41 30 20 18 37 45 31 24 39 31 53 31 34 40 33 32 30 32 31 42 52 22 53 35 32 42 31 32 52 41 52 45 40 31 40 33 33 40 33 32 32 40 26 31 32 24 37 45 38 35 31 18 46 31 31 31 33 25 46 14 16 31 32 28 22 14 27 21 24 32 26 29 31 30 31 25 29 31 31 31 24 32 26 43 22 27 26 28 43 46 42 31 31 33 32 32 33 31 31 23 16 22 12 31 20 36 31 31 32 31 25 32 24 32 32 29 31 42 23 32 31 47 26 26 30 21 19 31 31 31 36 39 25 34 26 25 16 6 46 27 25 25 25 26 24 23 31 28 22 24 18 12 22 32 18 26 28 33 30 30 20 16 31 21 13 30 17 19 26 33 20 15 14 14 9 15 32 31 31 31 11 6 17 37 31 23 32 31 33 25 18 26 18 9 15 13 32 14 29 16 16 32 21 21 30 11 34 31 32 15 24 11 30 32 5 6 29 8 11 26 14 8 7 15 17 21 15 14 15 7 4 5 26 17 14 10 7 21 12 7 15 25 28 11 5 5 5 4 26 10 8 11 5 8 16 3 11 24 9 10 14 10 11 11 15 19 17 12 21 10 30 28 11 5 20 7 27 5 13 9 10 10 11 4 8 7 9 7 9 17 10 15 9 15 7 7 10 8 13 3 12 10 13

Alignment Information

BAC End 1

BAC End 2

seq1: chr4_20700123_20701219
seq2: B6Ng01-230M19.g_70_1166 (reverse)

seq1  TCTAC-CACAACAGCAGTCCTGTCCTGTAATAAACCATCACTGACTGACC  49
      ||||| |||||||||||||||||||||||||||||||||||||||||| |
seq2  TCTACACACAACAGCAGTCCTGTCCTGTAATAAACCATCACTGACTGA-C  49

seq1  TGT-CTTCT-ATCTGGACTCCTTCCTAATGGATATAGCTCAAAAGGAATG  97
      ||| ||||| ||   |||||||| |||||||||||||||| |||||||||
seq2  TGTCCTTCTCATTCTGACTCCTT-CTAATGGATATAGCTC-AAAGGAATG  97

seq1  CTCAGACAACACAGAGAAGGTGCACTGAGCTTGACACACACAGTCTGGAT  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGACAACACAGAGAAGGTGCACTGAGCTTGACACACACAGTCTGGAT  147

seq1  GCTGTGTATCAGTAATAAACCTGACCAGAATGGAAACACAGTACTCTAGG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGTATCAGTAATAAACCTGACCAGAATGGAAACACAGTACTCTAGG  197

seq1  AGTCCTACAGACTGACCCCGTTGCTCGATAGTCAGTAAGCCTCCAAGGGA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTACAGACTGACCCCGTTGCTCGATAGTCAGTAAGCCTCCAAGGGA  247

seq1  GAGAATCACATGTGCAAGAGCTAGAGTTTAGGAACTCCAGAGGGACAGTG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATCACATGTGCAAGAGCTAGAGTTTAGGAACTCCAGAGGGACAGTG  297

seq1  CAGTCAGAGCTGGGGAGTCAGCCAACTCTGAGCCAAGGATGCAGCTCCTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAGAGCTGGGGAGTCAGCCAACTCTGAGCCAAGGATGCAGCTCCTT  347

seq1  TCTGTTTACCTTCAGAAATGAAGCCTCTGGTAGACAGCCTTGAGAGAAGT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTACCTTCAGAAATGAAGCCTCTGGTAGACAGCCTTGAGAGAAGT  397

seq1  CCAGTCTGTCCAAATTTTTCCAACCCAAAGAACTTACCTAATTTGAATGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCTGTCCAAATTTTTCCAACCCAAAGAACTTACCTAATTTGAATGA  447

seq1  CAGCCCATCCAAATCTTGGTGCACCTCATAATATTCAATCAGATTGCCCC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCATCCAAATCTTGGTGCACCTCATAATATTCAATCAGATTGCCCC  497

seq1  TCATAGATCTCTTGTATGACCCTGATATCAAGGTCCAACCACCCCTATAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGATCTCTTGTATGACCCTGATATCAAGGTCCAACCACCCCTATAA  547

seq1  GGGAGGCCATGAGGCTGGTAAGAAGCACTATGCCTCTTTCTAGCTCCTGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGCCATGAGGCTGGTAAGAAGCACTATGCCTCTTTCTAGCTCCTGG  597

seq1  TGGATTGTCTGCAGTTTCTGAACGTGATGGCCTGAGGCCATGGTCATAGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTGTCTGCAGTTTCTGAACGTGATGGCCTGAGGCCATGGTCATAGT  647

seq1  AGCCCAGCGACATAATCAGTAGCCTCTCCCTTTATCTTCCTCTGTATTTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAGCGACATAATCAGTAGCCTCTCCCTTTATCTTCCTCTGTATTTG  697

seq1  CATGCCTATTTTGTGCAAATTTACCATAGTTCTGTTCCTTTAGAGAACCC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCTATTTTGTGCAAATTTACCATAGTTCTGTTCCTTTAGAGAACCC  747

seq1  AAACTAAACGGATCTCACTACATTTTCATACATAGAATGTATTTTGACTA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAAACGGATCTCACTACATTTTCATACATAGAATGTATTTTGACTA  797

seq1  TTTTCAGCCCCCTATTATCTATCCTGTCTTGAATCCCTTCACTCCTGCTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGCCCCCTATTATCTATCCTGTCTTGAATCCCTTCACTCCTGCTG  847

seq1  CTCTTTTCTCTTCCCAGACAATCCCCCTTCTACTTTCAATATTTCCTGTG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTCTCTTCCCAGACAATCCCCCTTCTACTTTCAATATTTCCTGTG  897

seq1  GCCCCACATTTTTTAACAGCATAGCACATTCTTGTGTACTTGATGTGTAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCACATTTTTTAACAGCATAGCACATTCTTGTGTACTTGATGTGTAG  947

seq1  GTCAGCTCTCAGCCTTGGCTTATGAAAGGTGATTTCTACACCAATTCTAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCTCTCAGCCTTGGCTTATGAAAGGTGATTTCTACACCAATTCTAA  997

seq1  TGTCTCATTACTAGTCATAAATTAATGAATCTCTTAACCTTCTTAAGTTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCATTACTAGTCATAAATTAATGAATCTCTTAACCTTCTTAAGTTT  1047

seq1  CATAAGATGAGCCAGAATATTGAAATAAAGACAACAAAAATTAAGAATTC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGATGAGCCAGAATATTGAAATAAAGACAACAAAAATTAAGAATTC  1097

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information