BAC Information

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BAC

Clone NameB6Ng01-230N13
Chromosome4 (Build37)
Map Location 144,845,926 - 144,846,526
singlet/doubletsinglet
Overlap genenone
Upstream genePramel5, LOC666150, LOC626995, OTTMUSG00000010537, EG627009, Pramef12, D530049N12Rik, 1700012P22Rik, Aadacl3, 9430007A20Rik, LOC100041232, LOC666194, LOC627085, LOC666215, LOC435815, Gm436, LOC546849, Gm438, LOC666242, LOC676844, Dhrs3, Vps13d, Tnfrsf1b
Downstream geneTnfrsf8, LOC666282, 9230115A19Rik, LOC195576, LOC622846, LOC666314, LOC545701, OTTMUSG00000010965, LOC666334, LOC545703, LOC384081, LOC100041379, LOC666349, LOC666351, LOC545704, 1700029I01Rik, LOC236069, LOC384084, LOC666386, LOC666390, LOC100041433, LOC433790, LOC433791
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-230N13.bB6Ng01-230N13.g
ACCGA043603GA043604
length1,187601
definitionB6Ng01-230N13.b B6Ng01-230N13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttctttagctctgagccccatttttaagggggttatttgattt
tctggagtctactttcttgagttctttatatatattggatattagtcccc
tatcagatttaggataggtaaagatcctttcccaatctgttggtgtcctt
tttgtcttattgacggtgtcttttgccttacagaaagaagctttgcagtt
ttatgaagtcccatttgtcaattctcgatcttacagcacaagccattgct
gttctattcaggaatttttcccctatgcacatatcttcgaggcttttccc
cactttctcctctataagtttcactgtctctggttttatgtggagttcct
tgatctacttagatttgaccttagtacaaggagataggaatgaatcaatt
cacattcttctacatgataaccaccagttgtgccagcaccatttgttgaa
aatgctgtcttttttccactggatagttttagctcccttgtcaaagatca
agtgaccataggtgtttgggttcatttctgggtcttcaattctattccat
cggtctacttgcctgtctctataccagtaccatgcagtttttttttttta
attcaccattcttacccgcgttcacgaccggccaggaagaacacagcaaa
ccagaatcttctgcggcaaaactttattgcttacatcttcaggagcaaga
gtgcaagagagcaagagctctattgcttacatctttaggagccagagcgc
cagagtgcaagagagcgagagagcgagagagagcatggcgaaaccccgtc
ccctttaaggagaattatcctccgcctaggacgtgtcactccctgattgg
ctgcagcccatcggcccgagttgtcatcacggggaaggcagagcacatgg
agtggagaactacccttggcacatgcgcagattatttgtttaccacttag
aacacagatgtcagcgccatcttgcaacagcgaattgtgaggcgctccca
cagatccccttttcttttaataggagcaatagccaccgattttatgagag
tgagaatagagtcaattcccagtgtgcaggtaaggacgtaccatacctcc
tcccaggctcatcaccagaggtcctggctagtccagtcagatttcctgga
aagacccttgaacatcaaacttccgtggtaagtcgat
gaattctctttgtttgctactctttttcataattggcttaagggaagatt
gcctccccagcaaaataataataataatgataatagctgatgagagggct
tacttcgtaagagtgcttgctgcacaagcatgaagacttgagttcaagtc
tccagcacctacataagaaaacaggtttggtcatacattctggtaaccct
ggtgctgtacatagccgagacattagtagttcttaggcttgctggctgcc
aacctagctacagatttggtgagagatcctgtctcaagggaagaaggcag
agagtgacaaagcaggacaccttatgtcttcatctgtcacctgtacgtgc
acacacggatgtatgctccatcgccctttcaatgccccccccaacaattt
cccaaacaccagctgagggttcctggctagtgaaatgattctgcatgtaa
aggcactttctgccatactctgccatacctaatgacctgagatcgttccc
caggaagtacactgtggattgaaagaaccagttctataaagagctgagag
agagagagagagagagagagagagagagagagagagagagagagagagag
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_144845926_144846526
seq2: B6Ng01-230N13.g_69_669

seq1  GAATTCTCTTTGTTTGCTACTCTTTTTCATAATTGGCTTAAGGGAAGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTGTTTGCTACTCTTTTTCATAATTGGCTTAAGGGAAGATT  50

seq1  GCCTCCCCAGCAAAATAATAATAATAATGATAATAGCTGATGAGAGGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCCCAGCAAAATAATAATAATAATGATAATAGCTGATGAGAGGGCT  100

seq1  TACTTCGTAAGAGTGCTTGCTGCACAAGCATGAAGACTTGAGTTCAAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCGTAAGAGTGCTTGCTGCACAAGCATGAAGACTTGAGTTCAAGTC  150

seq1  TCCAGCACCTACATAAGAAAACAGGTTTGGTCATACATTCTGGTAACCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCACCTACATAAGAAAACAGGTTTGGTCATACATTCTGGTAACCCT  200

seq1  GGTGCTGTACATAGCCGAGACATTAGTAGTTCTTAGGCTTGCTGGCTGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTGTACATAGCCGAGACATTAGTAGTTCTTAGGCTTGCTGGCTGCC  250

seq1  AACCTAGCTACAGATTTGGTGAGAGATCCTGTCTCAAGGGAAGAAGGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAGCTACAGATTTGGTGAGAGATCCTGTCTCAAGGGAAGAAGGCAG  300

seq1  AGAGTGACAAAGCAGGACACCTTATGTCTTCATCTGTCACCTGTACGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGACAAAGCAGGACACCTTATGTCTTCATCTGTCACCTGTACGTGC  350

seq1  ACACACGGATGTATGCTCCATCGCCCTTTCAATGCCCCCCCCAACAATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACGGATGTATGCTCCATCGCCCTTTCAATGCCCCCCCCAACAATTT  400

seq1  CCCAAACACCAGCTGAGGGTTCCTGGCTAGTGAAATGATTCTGCATGTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAACACCAGCTGAGGGTTCCTGGCTAGTGAAATGATTCTGCATGTAA  450

seq1  AGGCACTTTCTGCCATACTCTGCCATACCTAATGACCTGAGATCGTTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACTTTCTGCCATACTCTGCCATACCTAATGACCTGAGATCGTTCCC  500

seq1  CAGGAAGTACACTGTGGATTGAAAGAACCAGTTCTATAAAGAGCTGAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGTACACTGTGGATTGAAAGAACCAGTTCTATAAAGAGCTGAGAG  550

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  600

seq1  A  601
      |
seq2  A  601