BAC Information

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BAC

Clone NameB6Ng01-231A13
Chromosome4 (Build37)
Map Location 23,430,614 - 23,546,066
singlet/doubletdoublet
Overlap geneLOC383998
Upstream geneLOC664911, 1700025O08Rik, LOC625462
Downstream geneLOC100040464, LOC623873, LOC664973, F730047E07Rik, Klhl32
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-231A13.bB6Ng01-231A13.g
ACCGA043741GA043742
length1,1091,122
definitionB6Ng01-231A13.b B6Ng01-231A13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,430,614 - 23,431,716)(23,544,934 - 23,546,066)
sequence
gaattcactctgtagacctggctgacctcgaactcggaaatctgcctgcc
tctgcctcccaagtgctaggatcgggggtcctttcaattaggaagtatat
aattttgccacaggttagacttgatagaaattcaaggttacctaaatcta
actactataccctgtagaacattgcataattgcatgcatatgtgactttt
taaaaaatattttaaagtttataacacacaaatattaactgttctccaag
cacaacttagatattgtcagttcatttaataatactaatacacattttaa
tttacaagtcacttcactaccaacatatttaaaagttatcttaatgataa
tttcaataaaattattattttattatgttttttaatattcttatagtaag
gaaactagtttcactgacattgagcactggataaccattgtgcattccct
tgggaagaatattttccttctcagaattccttagtggctatagatatgaa
aacataaatactagtaacattataagcaggctggatttatgaacttggga
atttatatgtatagacatatactatttatgtgataattaatacaaaatgc
atcatggatttaaaagaagatcaaagaggggtatgtggaagggtatggag
agagaaagggacagggaaaatggtataattatattataatctcataacat
aaaaggaataattagggtttttttttataaaacagtttttctgcatccag
ttcaagagttgttttttgtcttttgttgctgtttgcttgttttgcaattg
cattaagttatttacaacaaatcagttttgaatcagagaaacttaaagaa
gaaaacaatggctctggatttcatttatgtaaactttttcccattgtgat
gattctcccaccatttaaaacacatcattgatgatgttcatacatatatt
acaggaagatactggtctgtagacttttctatcagatccattacagttgt
aaaactttagcataaaaactaaaaatggaacctagacactagaagcttta
cattctccattcaggtaaacaaagttcacattatattgcactataaaatc
atagtaaat

gaattcctagctagccagagttatatagtatgaccctgtctcactaaaca
aataattcttaattaatattttttagtgtttttacagtacagatttattt
ttaaaagctttcttcagtaatggaattaattcttatttgtctaccaacac
atgcagattaaacactttatcttctttcagaaatgccacacacttatttg
ctactttaggaaaaaaaaaaaaaagagagaacgtgaaaactttgctttag
cccttttataaagatgactataattcaaaacattttcactcaataataca
ttctttgtccctatattatagtaataattactacaacaggaaaaagattc
acatttgtgtcagttgtttctgtttgataaaacaccaagaccaaggttac
ttataaatgtaagtggttacttagaacagcacacattgagagtccataat
ggtggcgctaaggcatggcagctagaacaactgagagcgcacacctcaaa
ctgccagcatgatgcagagagagccaatgaggaatgggcatggcttttgg
aatctcaaagctgcccccagtggcatgcctcttccagcaaggatacacct
attccttcccaaagtgttccatcaactggggatcaagcattcaaagattt
ctatggggaaattttttatttaagctatgacagcattttctaagaggttt
atttagtgctcaaagtatatttatgagttaggagactaagggaaaataag
gtcctcttcagaatttgtgcttgaatatttttgtagtccatttatactgt
tcacaagagcacaatgagggaacccaaaagccaagattatatactatgaa
tcactttgtctagactccaattgctgatctaaagcctgtaagactgcaga
ctgcattgaataataccactagtactatttgcttcctgtggttcactgta
cagtagtagttgctttgggttattataagaattaaacttaattactgata
tcttgtgagtatttactggtatctgtgactatctgtgctagcacttctgc
tgtggagaaaatgttgagaaagagagtcatgggcatctcagaaatgtgga
gtacaagttaacgagggacaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_23430614_23431716
seq2: B6Ng01-231A13.b_49_1157

seq1  GAATTCACTCTGTAGACCTGGCTGACCTCGAACTCGGAAATCTGCCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTAGACCTGGCTGACCTCGAACTCGGAAATCTGCCTGCC  50

seq1  TCTGCCTCCCAAGTGCTAGGATCGGGGGTCCTTTCAATTAGGAAGTATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCCAAGTGCTAGGATCGGGGGTCCTTTCAATTAGGAAGTATAT  100

seq1  AATTTTGCCACAGGTTAGACTTGATAGAAATTCAAGGTTACCTAAATCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGCCACAGGTTAGACTTGATAGAAATTCAAGGTTACCTAAATCTA  150

seq1  ACTACTATACCCTGTAGAACATTGCATAATTGCATGCATATGTGACTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTATACCCTGTAGAACATTGCATAATTGCATGCATATGTGACTTTT  200

seq1  TAAAAAATATTTTAAAGTTTATAACACACAAATATTAACTGTTCTCCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAATATTTTAAAGTTTATAACACACAAATATTAACTGTTCTCCAAG  250

seq1  CACAACTTAGATATTGTCAGTTCATTTAATAATACTAATACACATTTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACTTAGATATTGTCAGTTCATTTAATAATACTAATACACATTTTAA  300

seq1  TTTACAAGTCACTTCACTACCAACATATTTAAAAGTTATCTTAATGATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAAGTCACTTCACTACCAACATATTTAAAAGTTATCTTAATGATAA  350

seq1  TTTCAATAAAATTATTATTTTATTATGTTTTTTAATATTCTTATAGTAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATAAAATTATTATTTTATTATGTTTTTTAATATTCTTATAGTAAG  400

seq1  GAAACTAGTTTCACTGACATTGAGCACTGGATAACCATTGTGCATTCCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTAGTTTCACTGACATTGAGCACTGGATAACCATTGTGCATTCCCT  450

seq1  TGGGAAGAATATTTTCCTTCTCAGAATTCCTTAGTGGCTATAGATATGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGAATATTTTCCTTCTCAGAATTCCTTAGTGGCTATAGATATGAA  500

seq1  AACATAAATACTAGTAACATTATAAGCAGGCTGGATTTATGAACTTGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAAATACTAGTAACATTATAAGCAGGCTGGATTTATGAACTTGGGA  550

seq1  ATTTATATGTATAGACATATACTATTTATGTGATAATTAATACAAAATGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATATGTATAGACATATACTATTTATGTGATAATTAATACAAAATGC  600

seq1  ATCATGGATTTAAAAGAAGATCAAAGAGGGGTATGTGGAAGGGTATGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGGATTTAAAAGAAGATCAAAGAGGGGTATGTGGAAGGGTATGGAG  650

seq1  AGAGAAAGGGACAGGGAAAATGGTATAATTATATTATAATCTCATAACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAGGGACAGGGAAAATGGTATAATTATATTATAATCTCATAACAT  700

seq1  AAAAGGAATAATTAGGGTTTTTTTTTATAAAACAGTTTTTCTGCATCCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAATAATTAGGGTTTTTTTTTATAAAACAGTTTTTCTGCATCCAG  750

seq1  TTCAAGAGTTGTTTTTTGTCTTTTGTTGCTGTTTGCTTGTTTTGCAATTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGAGTTGTTTTTTGTCTTTTGTTGCTGTTTGCTTGTTTTGCAATTG  800

seq1  CATTAAGTTATTTACAACAAATCAGTTTTGAATCAGAGAAACTTAAAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAGTTATTTACAACAAATCAGTTTTGAATCAGAGAAACTTAAAGAA  850

seq1  GAAAACAATGGCTCTGGATTTCATTTATGTTAAACTTTTTCCCATTGTGA  900
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GAAAACAATGGCTCTGGATTTCATTTATG-TAAACTTTTTCCCATTGTGA  899

seq1  TGATTCTCCCACCATTTAAAACACATCATTGATGATGTTCATACATATAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGATTCTCCCACCATTTAAAACACATCATTGATGATGTTCATACATATAT  949

seq1  TACAGG-AGATACT-GTCTGTAGAC-TTTCTATCAGATTCATTACAGTTG  997
      |||||| ||||||| |||||||||| |||||||||||| |||||||||||
seq2  TACAGGAAGATACTGGTCTGTAGACTTTTCTATCAGATCCATTACAGTTG  999

seq1  TAAAACTTTAGCAATAAAAC-AAAAAT-GAACCTAGACACTAGAAGCTTA  1045
      |||||||||||||  ||||| |||||| ||||||||||||||||||||| 
seq2  TAAAACTTTAGCATAAAAACTAAAAATGGAACCTAGACACTAGAAGCTTT  1049

seq1  ACATTCTCCATTCAGTTAAACAAAATTCACA-TATATTGCA-TATAAAAT  1093
      ||||||||||||||| |||||||| |||||| ||||||||| ||||||||
seq2  ACATTCTCCATTCAGGTAAACAAAGTTCACATTATATTGCACTATAAAAT  1099

seq1  CATAGTAAAT  1103
      ||||||||||
seq2  CATAGTAAAT  1109


seq1: chr4_23544934_23546066
seq2: B6Ng01-231A13.g_65_1186 (reverse)

seq1  TTTGTCCTCTGTTACTTGGTACTCCACATTTCTGAAGGATTGGCCCAATG  50
      |||||||   ||||  | |||||||||||||||||  |||  |||| |||
seq2  TTTGTCCCTCGTTAACTTGTACTCCACATTTCTGA--GAT--GCCC-ATG  45

seq1  ACTCTCTTTCTCAACATTTTTCTCCACAGCCAGGAAAGTGCCTAGCACAG  100
      |||||||||||||||| |||||||||||| |||  ||||| |||||||||
seq2  ACTCTCTTTCTCAACA-TTTTCTCCACAG-CAG--AAGTG-CTAGCACAG  90

seq1  ATAGTCACAAGATACCAGTAAAATACTCACAAGATATCAGTAATTAAGTT  150
      |||||||| |||||||||| ||||||||||||||||||||||||||||||
seq2  ATAGTCAC-AGATACCAGT-AAATACTCACAAGATATCAGTAATTAAGTT  138

seq1  TAATTCTTATAATAACCCAAAGCAACTACTACTGTACAGTGAACCACAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCTTATAATAACCCAAAGCAACTACTACTGTACAGTGAACCACAGG  188

seq1  AAGCAAATAGTACTAGTGGTA-TATTCAATGCAGTCTGCAGTCTTACAGG  249
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AAGCAAATAGTACTAGTGGTATTATTCAATGCAGTCTGCAGTCTTACAGG  238

seq1  CTTTAGATCAGCAATTGGAGTCTAGACAAAGTGATTCATAGTATATAATC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGATCAGCAATTGGAGTCTAGACAAAGTGATTCATAGTATATAATC  288

seq1  TTGGCTTTTGGGTTCCCTCATTGTGCTCTTGTGAACAGTATAAATGGACT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTTTTGGGTTCCCTCATTGTGCTCTTGTGAACAGTATAAATGGACT  338

seq1  ACAAAAATATTCAAGCACAAATTCTGAAGAGGACCTTATTTTCCCTTAGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAATATTCAAGCACAAATTCTGAAGAGGACCTTATTTTCCCTTAGT  388

seq1  CTCCTAACTCATAAATATACTTTGAGCACTAAATAAACCTCTTAGAAAAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTAACTCATAAATATACTTTGAGCACTAAATAAACCTCTTAGAAAAT  438

seq1  GCTGTCATAGCTTAAATAAAAAATTTCCCCATAGAAATCTTTGAATGCTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCATAGCTTAAATAAAAAATTTCCCCATAGAAATCTTTGAATGCTT  488

seq1  GATCCCCAGTTGATGGAACACTTTGGGAAGGAATAGGTGTATCCTTGCTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCCAGTTGATGGAACACTTTGGGAAGGAATAGGTGTATCCTTGCTG  538

seq1  GAAGAGGCATGCCACTGGGGGCAGCTTTGAGATTCCAAAAGCCATGCCCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGGCATGCCACTGGGGGCAGCTTTGAGATTCCAAAAGCCATGCCCA  588

seq1  TTCCTCATTGGCTCTCTCTGCATCATGCTGGCAGTTTGAGGTGTGCGCTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCATTGGCTCTCTCTGCATCATGCTGGCAGTTTGAGGTGTGCGCTC  638

seq1  TCAGTTGTTCTAGCTGCCATGCCTTAGCGCCACCATTATGGACTCTCAAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTGTTCTAGCTGCCATGCCTTAGCGCCACCATTATGGACTCTCAAT  688

seq1  GTGTGCTGTTCTAAGTAACCACTTACATTTATAAGTAACCTTGGTCTTGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCTGTTCTAAGTAACCACTTACATTTATAAGTAACCTTGGTCTTGG  738

seq1  TGTTTTATCAAACAGAAACAACTGACACAAATGTGAATCTTTTTCCTGTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTATCAAACAGAAACAACTGACACAAATGTGAATCTTTTTCCTGTT  788

seq1  GTAGTAATTATTACTATAATATAGGGACAAAGAATGTATTATTGAGTGAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTAATTATTACTATAATATAGGGACAAAGAATGTATTATTGAGTGAA  838

seq1  AATGTTTTGAATTATAGTCATCTTTATAAAAGGGCTAAAGCAAAGTTTTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTTGAATTATAGTCATCTTTATAAAAGGGCTAAAGCAAAGTTTTC  888

seq1  ACGTTCTCTCTTTTTTTTTTTTTTCCTAAAGTAGCAAATAAGTGTGTGGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTCTCTCTTTTTTTTTTTTTTCCTAAAGTAGCAAATAAGTGTGTGGC  938

seq1  ATTTCTGAAAGAAGATAAAGTGTTTAATCTGCATGTGTTGGTAGACAAAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGAAAGAAGATAAAGTGTTTAATCTGCATGTGTTGGTAGACAAAT  988

seq1  AAGAATTAATTCCATTACTGAAGAAAGCTTTTAAAAATAAATCTGTACTG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTAATTCCATTACTGAAGAAAGCTTTTAAAAATAAATCTGTACTG  1038

seq1  TAAAAACACTAAAAAATATTAATTAAGAATTATTTGTTTAGTGAGACAGG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACACTAAAAAATATTAATTAAGAATTATTTGTTTAGTGAGACAGG  1088

seq1  GTCATACTATATAACTCTGGCTAGCTAGGAATTC  1133
      ||||||||||||||||||||||||||||||||||
seq2  GTCATACTATATAACTCTGGCTAGCTAGGAATTC  1122


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