BAC Information

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BAC

Clone NameB6Ng01-231B22
Chromosome4 (Build37)
Map Location 64,548,199 - 64,549,355
singlet/doubletsinglet
Overlap genenone
Upstream geneRpl17-ps, Tnc
Downstream genePappa, Astn2, Trim32
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-231B22.bB6Ng01-231B22.g
ACCGA043805GA043806
length1,2171,155
definitionB6Ng01-231B22.b B6Ng01-231B22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctaaagctgataaataacctcagaaagtatctggatataaaatt
aactcaaacaaataagtagccttcctctactcaaaggataaacaggttga
gaaagaaattagggaaaggacacccttcagaatagtcacaaataatatac
aacaccttggtgtgactctaattaagcaagtgaaagatctgtattataag
aatttcaagtctccaatgaaagaaattgaagaagatctaagaagatggaa
agatctcccatgctcatggattggcaagattaatatagtaaaaatggcca
tcttacagaaaggagtctacagtttcaatgaaatccccatcacaatccca
aatgaattgttcatagagttagaaagagcaatttgcaaattcatttgtaa
caacaaaaaacccaggataggaaaaactattcccaacaataaaagaactt
ctgggggaatctgtatccctgaccttaagctgtattacagagcaatactg
ataaaaactttatcatattggtacagagaaaggcaggaagataaatggaa
taaaattgaagacccagaaatgaactcacatacatatgttcgcttgatct
ttgacaaaggagctataaccacccagtggaaaaaagacagcattttaaac
aagtggtgctggttcaactggcagtcagcatgtagaagaatgcaaattga
accattcttatctccttgtacaaagctcaagtgcaaatggatcaaggacc
tccacataaaaccatatacactgaaacttatagatgagaaagtggggaaa
agcctcaaacaaatgggcacaggggatattttcctgaacagaacaccaat
gacttatgctctaagatcaagaatcgacaaatgggacctcataaaattac
aaagcttctgtaaggccaaggacactgtcaataggacaaaccatcttttc
ccaaccatcggattgggaaagatctttaccaatcctatatccaattgttg
gctaatattcaatatatacaaagaactcaagaaggttagacacctgaaat
tcaataactcttattaaaatggggtacagagctaaacaaaggaattttca
ctgagatatcaatgaacagagatgcactaaagaatgtttcattcacattc
ctggtcatcagaagtgatcaaacatcctgtgaagttctatcctcatttcc
gtgttccaggaaatgtc

gaattcatatggatgtcaggtatttgcagtttcttcagtcaaagataaga
gagttgtgtttcttttccagaagtcctactatagatctattaaaaaccat
gaaggaggttttacagtcaagacagcacagttttccaagtctcagattga
tattatataatatagagaggtaaggtgagtgtaaggattaggacatatat
gagaccctaaaagaattttctttccgtggtaaggagttaggtattctgtg
caagcatttgctttctaggagctttagttattgtggaaaaaataatacat
agtctattaaaagaacagtgtaaaactctccatgaatatgtagattccca
tctaagatgcagttaaattaatctgaaagtaattttgtgtacatacagcc
cttaggttatatgaacaaatctagaggttttgactgtcaccagtgaagcg
cttctgatatttatgctggaagccaaagatccattcccatcaacaataca
tgaggtaatcccttttcactctctaataaaaaactgatcaagcccaagtt
cactatagttgattctgaaaaactctgatttcaaagctgtacatgattaa
aatttgaagctggtttctaaataataatgttcaagatttttttcatcaac
caatcagaaacaatgaataggagtcaaatttatctcctaaaccactggtt
ctcaaccttctaaacactgaaaccatttaatatactttctcatgttatga
tgacaccaaacagaaaattattctgttgctacttcataagtataattttg
ctactgttacaaattgtaatttcaatagctgatatggaggatatctgata
tgtggcaaccaaagtggctcaacccacagtttgagaaacagtgccctaga
gtaaggcttgacaaagataaagaaccttttgtaccactgacaatagaatg
gtccatactcacggtatttatggtattttatagtaatggtgctaaagtac
tccctcacacagttatgtattatagtgtgattatttagagaagaatattt
tctgctagcaaccctcaagaaagtcatggtagtaccaatactaatgggct
ctaggattccctattttgccataagtgacttatacctgtttggacatcat
ctatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_64548199_64549355
seq2: B6Ng01-231B22.g_68_1222

seq1  GAATTCATATGGATGTCAGGTATTTGCAGTTTCTTCAGTCAAAGATAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATGGATGTCAGGTATTTGCAGTTTCTTCAGTCAAAGATAAGA  50

seq1  GAGTTGTGTTTCTTTTCCAGAAGTCCTACTATAGATCTATTAAAAACCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGTGTTTCTTTTCCAGAAGTCCTACTATAGATCTATTAAAAACCAT  100

seq1  GAAGGAGGTTTTACAGTCAAGACAGCACAGTTTTCCAAGTCTCAGATTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAGGTTTTACAGTCAAGACAGCACAGTTTTCCAAGTCTCAGATTGA  150

seq1  TATTATATAATATAGAGAGGTAAGGTGAGTGTAAGGATTAGGACATATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATATAATATAGAGAGGTAAGGTGAGTGTAAGGATTAGGACATATAT  200

seq1  GAGACCCTAAAAGAATTTTCTTTCCGTGGTAAGGAGTTAGGTATTCTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCCTAAAAGAATTTTCTTTCCGTGGTAAGGAGTTAGGTATTCTGTG  250

seq1  CAAGCATTTGCTTTCTAGGAGCTTTAGTTATTGTGGAAAAAATAATACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCATTTGCTTTCTAGGAGCTTTAGTTATTGTGGAAAAAATAATACAT  300

seq1  AGTCTATTAAAAGAACAGTGTAAAACTCTCCATGAATATGTAGATTCCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTATTAAAAGAACAGTGTAAAACTCTCCATGAATATGTAGATTCCCA  350

seq1  TCTAAGATGCAGTTAAATTAATCTGAAAGTAATTTTGTGTACATACAGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGATGCAGTTAAATTAATCTGAAAGTAATTTTGTGTACATACAGCC  400

seq1  CTTAGGTTATATGAACAAATCTAGAGGTTTTGACTGTCACCAGTGAAGCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGTTATATGAACAAATCTAGAGGTTTTGACTGTCACCAGTGAAGCG  450

seq1  CTTCTGATATTTATGCTGGAAGCCAAAGATCCATTCCCATCAACAATACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGATATTTATGCTGGAAGCCAAAGATCCATTCCCATCAACAATACA  500

seq1  TGAGGTAATCCCTTTTCACTCTCTAATAAAAAACTGATCAAGCCCAAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTAATCCCTTTTCACTCTCTAATAAAAAACTGATCAAGCCCAAGTT  550

seq1  CACTATAGTTGATTCTGAAAAACTCTGATTTCAAAGCTGTACATGATTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATAGTTGATTCTGAAAAACTCTGATTTCAAAGCTGTACATGATTAA  600

seq1  AATTTGAAGCTGGTTTCTAAATAATAATGTTCAAGATTTTTTTCATCAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGAAGCTGGTTTCTAAATAATAATGTTCAAGATTTTTTTCATCAAC  650

seq1  CAATCAGAAACAATGAATAGGAGTCAAATTTATCTCCTAAACCACTGGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAGAAACAATGAATAGGAGTCAAATTTATCTCCTAAACCACTGGTT  700

seq1  CTCAACCTTCTAAACACTGAAACCATTTAATATACTTTCTCATGTTATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACCTTCTAAACACTGAAACCATTTAATATACTTTCTCATGTTATGA  750

seq1  TGACACCAAACAGAAAATTATTCTGTTGCTACTTCATAAGTATAATTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACCAAACAGAAAATTATTCTGTTGCTACTTCATAAGTATAATTTTG  800

seq1  CTACTGTTACAAATTGTAATTTCAATAGCTGATATGGAGGATATCTGATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGTTACAAATTGTAATTTCAATAGCTGATATGGAGGATATCTGATA  850

seq1  TGTGGCAACCAAAGTGGCTCAACCCACAGTTTGAGAAACAGTGCCCTAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCAACCAAAGTGGCTCAACCCACAGTTTGAGAAACAGTGCCCTAGA  900

seq1  GTAAGGCTTGACAAAGATAAAAGAACC-TTTGTACCACTGACAAATAGAA  949
      |||||||||||||||||| |||||||| |||||||||||||| ||||| |
seq2  GTAAGGCTTGACAAAGAT-AAAGAACCTTTTGTACCACTGAC-AATAG-A  947

seq1  ATGGTCCATACTCACGGTATTTATGGTA-TTTATAGTAAT-GTGCTAAAG  997
      |||||||||||||||||||||||||||| ||||||||||| |||||||||
seq2  ATGGTCCATACTCACGGTATTTATGGTATTTTATAGTAATGGTGCTAAAG  997

seq1  TACTCCCTCACACAGGTTATGTA-TATAGTGTGGATATTTAAGAGAAG-A  1045
      |||||||||||||| |||||||| |||||||||  ||||| ||||||| |
seq2  TACTCCCTCACACA-GTTATGTATTATAGTGTGATTATTT-AGAGAAGAA  1045

seq1  TATTTTCTGCTAGCAAACCTCAAGAAAAATTCATTGTAGTACCCATACTA  1095
      |||||||||||||||| |||||||  ||| |||| |||||||| ||||||
seq2  TATTTTCTGCTAGCAACCCTCAAG--AAAGTCATGGTAGTACCAATACTA  1093

seq1  --TGGCTCTAGGAATTTCCTATTTTG-CATAATTGAAACTTTATA-CTGT  1141
         ||||||||| ||| ||||||||| ||||| |||    ||||| ||||
seq2  ATGGGCTCTAGG-ATTCCCTATTTTGCCATAAGTGA---CTTATACCTGT  1139

seq1  TTGGCCATCATCTATG  1157
      |||| |||||||||||
seq2  TTGGACATCATCTATG  1155


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