BAC Information

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BAC

Clone NameB6Ng01-231G22
Chromosome4 (Build37)
Map Location 24,137,845 - 24,138,987
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC625462, LOC383998, LOC100040464, LOC623873
Downstream geneLOC664973, F730047E07Rik, Klhl32, 1110007M04Rik, C230012O17Rik, Gpr63, Fhl5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-231G22.bB6Ng01-231G22.g
ACCGA044037GA044038
length1,1951,148
definitionB6Ng01-231G22.b B6Ng01-231G22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattgctttgttcagttctgagccccatttttaatggggttatttgctt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgctttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgttcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagtaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtggattcatctctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaatttctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatctttcacttcccttagttagagtcactccgagatattttatatta
tttgtgactattgagaaggtgttgttccctaatttctttctcagcctgtt
tattcttttgtgtagagaaaggccattgacttgtttgagtattttaatat
tcaagctactccaccgagctgttttattcagtttagagtctctggtggaa
ttttaaggtcacttatatatacctattctatccactgcaaaggtatactt
gactctcctctttcatggtaatcctccttgatactctctctcatg
ttaaacatagccattatttgtttcattagatgaacagagatcctaattag
ggtcagtgtagtttacacatgtccagccttgatattactgcatgcaatag
ttttcaaaccatacgaatatattaactgaatgtacaactcctgttctatt
tgctgaagcatttttaagagacttaaattgccagaagatatggatttcta
gtttgaatttgccattaattagttatgtaatttaggtgaaatgatttact
tcttcttaagtcaagtttcttagtaaaaaagtagaaacaatgccctttca
ttaataatacttgcattgtcccataactttcacagataatcttttagcac
acttaaagagaagccttactattagtgatacccccaatttttttcttcaa
actaaccaaccatcaatctaccaaccaaccatcttgcaacccagttgtct
agtctgtcagcagccaaccaaccactatgaacaaaacaaatacagacaca
tcactctaggtggtgtcaggattttacagactataatgccttgagttata
gagaccttgatttaaatagtggcttagttcatttactaaatatttcttgg
gaaattattttcaaaaatgatttttttgtggtggcttgattttacctcaa
agactaaaagaaaaagagaaaaatgagcctccctggtccagaactggtga
gagtcacccacttgatggtatctccttccccatttcatgacaatattgta
caaatggatgtatagtcagggaaatgtagcttagtattgatgtttttatg
gtaatgataaaatattgtgtttcatctggctttgttcccttgcttaaatc
actgtatataaatcttctttttcattatacattagcaaggacaaaggctg
gcttttgactcggtattatatgtatatcttaaatgtaaatgactcagtgt
aataagtagatcttatctcagtgaaaggagcctaagaaaagctaagaaaa
tatattaatgtcttgcaacaaagaagattggtgttttgatgggtttcagt
tttagaggggagaaatcaaagtacgagtcttgtaacgtcttagccatcac
tgagtttggaatggaagactaagaggcacgtgacttggtattctagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_24137845_24138987
seq2: B6Ng01-231G22.g_79_1226 (reverse)

seq1  ATCTAG-ATCACAAGTCACATCCCTCTTTAGTCTT-CAATCCAAACTCAG  48
      |||||| ||  |||||||| | |||| |||||||| || |||||||||||
seq2  ATCTAGAATACCAAGTCACGTGCCTC-TTAGTCTTCCATTCCAAACTCAG  49

seq1  TGATGCCT-AGACGGTTAACAAGACTCGTACTTTGATTTCT-CCCTCTAA  96
      ||||| || |||||  | ||||||||||||||||||||||| ||||||||
seq2  TGATGGCTAAGACG--TTACAAGACTCGTACTTTGATTTCTCCCCTCTAA  97

seq1  AACTGAAACCCATCAAAAC-CACATC-TCTTTGTTGCAAGACATTAATAT  144
      ||||||||||||||||||| |  ||| |||||||||||||||||||||||
seq2  AACTGAAACCCATCAAAACACCAATCTTCTTTGTTGCAAGACATTAATAT  147

seq1  A-TTTCTTAGCTTTTCTTAGGCTCC-TTCACTGAGATAAGATCTACTTAT  192
      | ||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATTTTCTTAGCTTTTCTTAGGCTCCTTTCACTGAGATAAGATCTACTTAT  197

seq1  AACACTGAGTCATTTACATTTAAGATATACATATAATACCGAGTCAAAAG  242
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTGAGTCATTTACATTTAAGATATACATATAATACCGAGTCAAAAG  247

seq1  CCAGCCTTTGTCCTTGCTAATGTATAATGAAAAAGAAGATTTATATACAG  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCTTTGTCCTTGCTAATGTATAATGAAAAAGAAGATTTATATACAG  297

seq1  TGATTTAAGCAAGGGAACAAAGCCAGATGAAACACAATATTTTATCATTA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTAAGCAAGGGAACAAAGCCAGATGAAACACAATATTTTATCATTA  347

seq1  CCATAAAAACATCAATACTAAGCTACATTTCCCTGACTATACATCCATTT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAAAACATCAATACTAAGCTACATTTCCCTGACTATACATCCATTT  397

seq1  GTACAATATTGTCATGAAATGGGGAAGGAGATACCATCAAGTGGGTGACT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAATATTGTCATGAAATGGGGAAGGAGATACCATCAAGTGGGTGACT  447

seq1  CTCACCAGTTCTGGACCAGGGAGGCTCATTTTTCTCTTTTTCTTTTAGTC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCAGTTCTGGACCAGGGAGGCTCATTTTTCTCTTTTTCTTTTAGTC  497

seq1  TTTGAGGTAAAATCAAGCCACCACAAAAAAATCATTTTTGAAAATAATTT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGGTAAAATCAAGCCACCACAAAAAAATCATTTTTGAAAATAATTT  547

seq1  CCCAAGAAATATTTAGTAAATGAACTAAGCCACTATTTAAATCAAGGTCT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGAAATATTTAGTAAATGAACTAAGCCACTATTTAAATCAAGGTCT  597

seq1  CTATAACTCAAGGCATTATAGTCTGTAAAATCCTGACACCACCTAGAGTG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAACTCAAGGCATTATAGTCTGTAAAATCCTGACACCACCTAGAGTG  647

seq1  ATGTGTCTGTATTTGTTTTGTTCATAGTGGTTGGTTGGCTGCTGACAGAC  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTCTGTATTTGTTTTGTTCATAGTGGTTGGTTGGCTGCTGACAGAC  697

seq1  TAGACAACTGGGTTGCAAGATGGTTGGTTGGTAGATTGATGGTTGGTTAG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAACTGGGTTGCAAGATGGTTGGTTGGTAGATTGATGGTTGGTTAG  747

seq1  TTTGAAGAAAAAAATTGGGGGTATCACTAATAGTAAGGCTTCTCTTTAAG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGAAAAAAATTGGGGGTATCACTAATAGTAAGGCTTCTCTTTAAG  797

seq1  TGTGCTAAAAGATTATCTGTGAAAGTTATGGGACAATGCAAGTATTATTA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTAAAAGATTATCTGTGAAAGTTATGGGACAATGCAAGTATTATTA  847

seq1  ATGAAAGGGCATTGTTTCTACTTTTTTACTAAGAAACTTGACTTAAGAAG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAGGGCATTGTTTCTACTTTTTTACTAAGAAACTTGACTTAAGAAG  897

seq1  AAGTAAATCATTTCACCTAAATTACATAACTAATTAATGGCAAATTCAAA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAATCATTTCACCTAAATTACATAACTAATTAATGGCAAATTCAAA  947

seq1  CTAGAAATCCATATCTTCTGGCAATTTAAGTCTCTTAAAAATGCTTCAGC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAATCCATATCTTCTGGCAATTTAAGTCTCTTAAAAATGCTTCAGC  997

seq1  AAATAGAACAGGAGTTGTACATTCAGTTAATATATTCGTATGGTTTGAAA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGAACAGGAGTTGTACATTCAGTTAATATATTCGTATGGTTTGAAA  1047

seq1  ACTATTGCATGCAGTAATATCAAGGCTGGACATGTGTAAACTACACTGAC  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTGCATGCAGTAATATCAAGGCTGGACATGTGTAAACTACACTGAC  1097

seq1  CCTAATTAGGATCTCTGTTCATCTAATGAAACAAATAATGGCTATGTTTA  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATTAGGATCTCTGTTCATCTAATGAAACAAATAATGGCTATGTTTA  1147

seq1  A  1143
      |
seq2  A  1148