BAC Information

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BAC

Clone NameB6Ng01-231N23
Chromosome4 (Build37)
Map Location 15,255,202 - 15,256,324
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC433688, Slc26a7, 1700034K16Rik, Otud6b, LOC100040047, Tmem55a, OTTMUSG00000004551, Efcbp1, Tmem64
Downstream geneLOC100040095, LOC633695, Calb1, Decr1, Nbn, Osgin2, Ripk2, LOC667150
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-231N23.bB6Ng01-231N23.g
ACCGA044351GA044352
length1,1321,146
definitionB6Ng01-231N23.b B6Ng01-231N23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgttgtgctttttcaaaaacctcttggaaatgaaaactgaataa
tcttcattttctttccccaggaagctctaaggttcagggttaatgagctg
acctctctgtctacattcataggtggatgtagtaatattcacccacaatt
aactaacatacagataattcacattagtctaatactttagaatttagaat
aaagatctttctggtctagacttgcacacagaaaactattactcagaaag
gttattattgagtcaagtttcataaaaatgtatctctacaactgaaatat
ttgactgacctcatacatattcacttactacccataaaaatacatgcaaa
tattttttgaaaacaaaacaaaaagtcttcacagaaaatgaaaggattgt
gaaagccgtttccagagtggatacagaagttagaaaaacagcaaatcaaa
ggtgttagcatcctgccatccagtggtcattattggtactacagtacctt
cccatttataatttccactcaagtcttccaaagtgtgaggacccccaaaa
gacaacattggtgattgtggctgtatatgtatgtgtaaattctataattc
ttcaagtgattcgtagacactttcacggtcattaaatttcagaagtgaca
agctaaatatttagatatttgtaatattttctaattgaatgaacataaac
atcaggaagagactgtagtttcatattataagcacagtactgagttctac
gtgactttgatattttaaaggaagatattggaaagaagaggctaggtagc
ttctaaagagagtctcttcactctccacctcgcctgcactggtctacaga
cagatgctttccatctttgtaatataggagcctactagcctcacatcctg
accatcacagggaatattcacatttattgaatcccttttctctccctgta
ccttcctcaagactagtagaaagctgctcttggcggcaggcagataaagg
agccatgctgtcaacaccttggaataatggcacaattgctggaaccacac
actaatcttggtcaagtcaccttcaataacaatgcaaaaagaaaaacggc
agtttgccatcctagaaattctggtttctgca
gaattctcactggaggaatacctaatggttgagaagcacctgaaaaaatg
ctcagcatccttaatcatcaaagaaatgcaaatcaaaacaaccctgagat
tccatttcataccagtcagaatagctaagatcaaaaattcaggtgacagc
aaatgctggtgaggatgtggagaaagaggaacactcttccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatcctctaatacctctcctgggc
atatatccagaagatgtcccaatcggtaagaaggacacatgctccactat
gttcatagcagccttatttgtaatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacaaaatgtggtacatttacacaatgga
gctattaaaaagaatggatttatgaaattccttggcataaggatggaggg
catcatcctgagtgaggtaacacaatcacaaaagaactcaaatgatatgt
actcactgataagtggatattagcccagaaagttagcatacccgagatat
aagagacaatttgtaaaacacatgaaactgaagaagaacgaaaaccaaag
tgtggacacttttccccttcttagaattggaaacaatcacccatggaagg
agttacagagacaaagtttggagctgagataaaaggatggaccatttaga
gactgccatatctagggatccatcccataattagcctccaaactatgaca
ccattgcatacactagcaagcattggctgaaaggaccctgatatagctgt
ctcatgtgagactaggctggggcctagcaaacacataagtacatgctcac
agttggctattggatggatcacagggccccaatggagagctagagaaagt
atccaaggagctaaagaaatctgcacctgtagtgcacacattatgactaa
cagtaccccggagctcttgacctctagctgcatttgtattcaaagatggc
ctagtagttcatcacttgataagagaagcccatgtcgtgcaaccttatat
ggccagttacaggacgctcagggtcctaaagttggaggtggatgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_15255202_15256324
seq2: B6Ng01-231N23.b_46_1177 (reverse)

seq1  TGCAGAAA-CAGAA-TTCTAGGAT-GCAAACTGC--GTTTTCTTTTTGCA  45
      |||||||| ||||| ||||||||| |||||||||   |||||||||||||
seq2  TGCAGAAACCAGAATTTCTAGGATGGCAAACTGCCGTTTTTCTTTTTGCA  50

seq1  -TGT--ATGAAGGTGACTGAACCAAGATTAGTGTGTGG-TCCAGCAATGG  91
       |||   |||||||||||  |||||||||||||||||| ||||||||| |
seq2  TTGTTATTGAAGGTGACTTGACCAAGATTAGTGTGTGGTTCCAGCAATTG  100

seq1  TGCCATTA-TCCAAGGTGGTGACAGCATGGGCTCCTTTATCTGCCTGCCG  140
      |||||||| ||||||||| ||||||||| |||||||||||||||||||||
seq2  TGCCATTATTCCAAGGTGTTGACAGCAT-GGCTCCTTTATCTGCCTGCCG  149

seq1  CCAAGGGCAGCTTTCTACTAGTCTTGAGGAAGGTACAGGGAGAGAAAAGG  190
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAGCAGCTTTCTACTAGTCTTGAGGAAGGTACAGGGAGAGAAAAGG  199

seq1  GATTCAATAAATGTGAATATTCCCTGTGATGGTCAGGATGTGAGGCTAGT  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCAATAAATGTGAATATTCCCTGTGATGGTCAGGATGTGAGGCTAGT  249

seq1  AGGCTCCTATATTACAAAGATGGAAAGCATCTGTCTGTAGACCAGTGCAG  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCCTATATTACAAAGATGGAAAGCATCTGTCTGTAGACCAGTGCAG  299

seq1  GCGAGGTGGAGAGTGAAGAGACTCTCTTTAGAAGCTACCTAGCCTCTTCT  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAGGTGGAGAGTGAAGAGACTCTCTTTAGAAGCTACCTAGCCTCTTCT  349

seq1  TTCCAATATCTTCCTTTAAAATATCAAAGTCACGTAGAACTCAGTACTGT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAATATCTTCCTTTAAAATATCAAAGTCACGTAGAACTCAGTACTGT  399

seq1  GCTTATAATATGAAACTACAGTCTCTTCCTGATGTTTATGTTCATTCAAT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATAATATGAAACTACAGTCTCTTCCTGATGTTTATGTTCATTCAAT  449

seq1  TAGAAAATATTACAAATATCTAAATATTTAGCTTGTCACTTCTGAAATTT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAATATTACAAATATCTAAATATTTAGCTTGTCACTTCTGAAATTT  499

seq1  AATGACCGTGAAAGTGTCTACGAATCACTTGAAGAATTATAGAATTTACA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACCGTGAAAGTGTCTACGAATCACTTGAAGAATTATAGAATTTACA  549

seq1  CATACATATACAGCCACAATCACCAATGTTGTCTTTTGGGGGTCCTCACA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATATACAGCCACAATCACCAATGTTGTCTTTTGGGGGTCCTCACA  599

seq1  CTTTGGAAGACTTGAGTGGAAATTATAAATGGGAAGGTACTGTAGTACCA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGAAGACTTGAGTGGAAATTATAAATGGGAAGGTACTGTAGTACCA  649

seq1  ATAATGACCACTGGATGGCAGGATGCTAACACCTTTGATTTGCTGTTTTT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGACCACTGGATGGCAGGATGCTAACACCTTTGATTTGCTGTTTTT  699

seq1  CTAACTTCTGTATCCACTCTGGAAACGGCTTTCACAATCCTTTCATTTTC  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTTCTGTATCCACTCTGGAAACGGCTTTCACAATCCTTTCATTTTC  749

seq1  TGTGAAGACTTTTTGTTTTGTTTTCAAAAAATATTTGCATGTATTTTTAT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAGACTTTTTGTTTTGTTTTCAAAAAATATTTGCATGTATTTTTAT  799

seq1  GGGTAGTAAGTGAATATGTATGAGGTCAGTCAAATATTTCAGTTGTAGAG  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAGTAAGTGAATATGTATGAGGTCAGTCAAATATTTCAGTTGTAGAG  849

seq1  ATACATTTTTATGAAACTTGACTCAATAATAACCTTTCTGAGTAATAGTT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTTTTATGAAACTTGACTCAATAATAACCTTTCTGAGTAATAGTT  899

seq1  TTCTGTGTGCAAGTCTAGACCAGAAAGATCTTTATTCTAAATTCTAAAGT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGTGCAAGTCTAGACCAGAAAGATCTTTATTCTAAATTCTAAAGT  949

seq1  ATTAGACTAATGTGAATTATCTGTATGTTAGTTAATTGTGGGTGAATATT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGACTAATGTGAATTATCTGTATGTTAGTTAATTGTGGGTGAATATT  999

seq1  ACTACATCCACCTATGAATGTAGACAGAGAGGTCAGCTCATTAACCCTGA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACATCCACCTATGAATGTAGACAGAGAGGTCAGCTCATTAACCCTGA  1049

seq1  ACCTTAGAGCTTCCTGGGGAAAGAAAATGAAGATTATTCAGTTTTCATTT  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTAGAGCTTCCTGGGGAAAGAAAATGAAGATTATTCAGTTTTCATTT  1099

seq1  CCAAGAGGTTTTTGAAAAAGCACAACAGAATTC  1123
      |||||||||||||||||||||||||||||||||
seq2  CCAAGAGGTTTTTGAAAAAGCACAACAGAATTC  1132