BAC Information

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BAC

Clone NameB6Ng01-231P16
Chromosome4 (Build37)14 (Build37)
Map Location 104,803,168 - 104,803,27476,072,516 - 76,073,475
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneDab1, C8b, C8a, 1700024P16Rik, Prkaa2, LOC100039513
Downstream genePpap2b, LOC433742, LOC665518, LOC434381, Ppia-ps4_954.1, Map1lc3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-231P16.bB6Ng01-231P16.g
ACCGA044433GA044434
length239964
definitionB6Ng01-231P16.b B6Ng01-231P16.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,803,168 - 104,803,274)(76,072,516 - 76,073,475)
sequence
tgcaagaaaatagattctgcaagtccctgctggtttctttgggagttatg
ttagacaagttggtttttttccccccattgctgtaaccaaatacttgaga
aaaacaatttaaaaggaggaacgattttgttgttattattttcaagacag
ggtttctctgtgtagccctggctgtcctggaactcactctgtagaccagg
ctggcctcgaactcagaaatcagcctgcctctgcctccc

gaattcttcccttgtaatgggaatcctgtttgagtgcagattctaaatgg
tgaggtttggaaaatgttggcctagaaagggggctctccgttacttatga
tgactgagggatcatagtccgggtagccagactttaggacagcctgtgga
tttgtgccacagtggtcagtccagcctagctcttagcctcacctacctag
accgacgagaggagtggaggagttaaaattgatctgaattttgcctgggt
gttcattaatctctggggtcgggctgcccattgcacagagctgatcccgg
actggtcactgattttctcctccattcccctcatctgctgtcaaacaaaa
acttcggcgacacagccagacaagccttactggggaccggtgcggtaaga
ataggggatgcagaaaggaccttggcagtgggagtttgtaatgagagaaa
gagggaactcaaacacaaacacagcctggacaggtgggagtcacatccaa
agggcagggagaggtgactgggcggaaatggctgtgaagagatcacaggg
aggggattcacaccaaaggcaagccagagtgaccagacacccagttagat
ggccctggaccactgaggaaccaggcccaggatcgagatattcgggcctc
agggtgtgaggctcccactaaatgggcttagcaaggcactggctacaacc
aggtttcagaaagaaggggacagatgggtcaaggagatgcctcaggagat
gtaagctgtgaccacgcaaaggtttctttctctcagtggaatatggggat
tgttgttttgactctgtgggaatgtacacggctcaaacttttatcacaaa
ttcaagggtttcagttctatcaagaagagccatagaagagatgcacccaa
taaaattggaatcaaaatggtttcttaaatcagatacaggggtgaaggga
acaggaaggctgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_104803168_104803274
seq2: B6Ng01-231P16.b_185_288 (reverse)

seq1  GGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACA  50
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GGGAGGCAGAGGCAGGCTGATTTCTGAGTTCGAGGCCAGCCTGGTCTACA  50

seq1  GAGTGAGCTCCAGGACAGCCAGGTCTACACAGAGAAACCCTGTCTTGAAG  100
      ||||||| ||||||||||||||| ||||||||||||||||||||||   |
seq2  GAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTT---G  97

seq1  AAAATAA  107
      |||||||
seq2  AAAATAA  104


seq1: chr14_76072516_76073475
seq2: B6Ng01-231P16.g_68_1031

seq1  GAATTCTTCCCTTGTAATGGGAATCCTGTTTGAGTGCAGATTCTAAATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCCTTGTAATGGGAATCCTGTTTGAGTGCAGATTCTAAATGG  50

seq1  TGAGGTCTGGAAAATGTTGGCCTAGAAAGGGGGCTCTCCGTTACTTATGA  100
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTTTGGAAAATGTTGGCCTAGAAAGGGGGCTCTCCGTTACTTATGA  100

seq1  TGACTGAGGGATCATAGTCCGGGTAGCCAGACTTTAGGACAGCCTGTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGAGGGATCATAGTCCGGGTAGCCAGACTTTAGGACAGCCTGTGGA  150

seq1  TTTGTGCCACAGTGGTCAGTCCAGCCTAGCTCTTAGCCTCACCTACCTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGCCACAGTGGTCAGTCCAGCCTAGCTCTTAGCCTCACCTACCTAG  200

seq1  ACCGACGAGAGGAGTGGAGGAGTTAAAATTGATCTGAATTTTGCCTGGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGACGAGAGGAGTGGAGGAGTTAAAATTGATCTGAATTTTGCCTGGGT  250

seq1  GTTCATTAATCTCTGGGGTCGGGCTGCCCATTGCACAGAGCTGATCCCGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTAATCTCTGGGGTCGGGCTGCCCATTGCACAGAGCTGATCCCGG  300

seq1  ACTGGTCACTGATTTTCTCCTCCATTCCCCTCATCTGCTGTCAAACAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTCACTGATTTTCTCCTCCATTCCCCTCATCTGCTGTCAAACAAAA  350

seq1  ACTTCGGCGACACAGCCAGACAAGCCTTACTGGGGACCGGTGCGGTAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCGGCGACACAGCCAGACAAGCCTTACTGGGGACCGGTGCGGTAAGA  400

seq1  ATAGGGGATGCAGAAAGGACCTTGGCAGTGGGAGTTTGTAATGAGAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGGATGCAGAAAGGACCTTGGCAGTGGGAGTTTGTAATGAGAGAAA  450

seq1  GAGGGAACTCAAACACAAACACAGCCTGGACAGGTGGGAGTCACATCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAACTCAAACACAAACACAGCCTGGACAGGTGGGAGTCACATCCAA  500

seq1  AGGGCAGGGAGAGGTGACTGGGCGGAAATGGCTGTGAAGAGATCACAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAGGGAGAGGTGACTGGGCGGAAATGGCTGTGAAGAGATCACAGGG  550

seq1  AGGGGATTCACACCAAAGGCAAGCCAGAGTGACCAGACACCCAGTTAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGATTCACACCAAAGGCAAGCCAGAGTGACCAGACACCCAGTTAGAT  600

seq1  GGCCCTGGACCACTGAGGAACCAGGCCCAGGATCGAGATATTCGGGCCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTGGACCACTGAGGAACCAGGCCCAGGATCGAGATATTCGGGCCTC  650

seq1  AGGGTGTGAGGCTCCCACTAAATGGGCTTAGCAAGGCACTGGCTACAACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGTGAGGCTCCCACTAAATGGGCTTAGCAAGGCACTGGCTACAACC  700

seq1  AGGTTTCAGAAAGAAGGGGACAGATGGGTCAAGGAGATGCCTCAGGAGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTCAGAAAGAAGGGGACAGATGGGTCAAGGAGATGCCTCAGGAGAT  750

seq1  GTAAGCTGTGACCACGCAAAGGTTTCTTTCTCTCAGTGGAATATGGGGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGCTGTGACCACGCAAAGGTTTCTTTCTCTCAGTGGAATATGGGGAT  800

seq1  TGTTGTTTTGACTCTGTGGGAATGTACACGGCTCAAACTTTTATCACAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTTTGACTCTGTGGGAATGTACACGGCTCAAACTTTTATCACAAA  850

seq1  TTCAAGGG-TTCAGTTCTATCAAGAAGAGCCATAGAAGAGATGCACCCAA  899
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGGGTTTCAGTTCTATCAAGAAGAGCCATAGAAGAGATGCACCCAA  900

seq1  ATAAAATGGAATCAAAATTGGTTCTT-AATCAGATACAGGGGTGA--GGG  946
        ||| |||||||||||| | ||||| ||||||||||||||||||  || 
seq2  TAAAATTGGAATCAAAATGGTTTCTTAAATCAGATACAGGGGTGAAGGGA  950

seq1  ACAAGGAGGCTGTG  960
      ||| | ||||||||
seq2  ACAGGAAGGCTGTG  964


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