BAC Information

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BAC

Clone NameB6Ng01-232A08
Chromosome4 (Build37)
Map Location 7,902,932 - 8,075,330
singlet/doubletdoublet
Overlap geneCar8
Upstream geneTox, LOC666700
Downstream geneLOC100039494, LOC100039505, LOC100039478, Rab2, EG666752, LOC666760, Chd7, LOC666782
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232A08.bB6Ng01-232A08.g
ACCGA044461GA044462
length1,0231,168
definitionB6Ng01-232A08.b B6Ng01-232A08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,074,323 - 8,075,330)(7,902,932 - 7,904,091)
sequence
gaattcattagaaattaggatattcttcaagtagaattttcttttatgaa
cttcagataaagtctgtcgaccaacctatccaaatgagttctgtaaagct
ctgatccatgcggagatctcttgagtcagtaaagatggtccccatcctga
agacaatgtccctttaggcatttacagggcaagttagcaaagagatcctg
gtgattctgagttaaagaactgttaccagaatctccatgggggtttggga
catttttttcccccatccagcttttagtattgttagcaacacattttggg
aaagattcaatttcattgtttccttgcagaaaacgaatgcatgttcatta
agaccctcttaactctgaaatgtggtacactgatttgattagcagtcagt
ttcatgtattttaatttgtaatccttgtgcttattgttgttaaaatgtgt
atcttgacaatatcttattttacccttgaaaaatcagatttctgaggttt
aatattatagatatgatggaaggagtcggaagatactggccaaaattata
aagtttaaattaagaatgtgttcaagagaatgtcatagtgactgcagttt
aaagtgatgttattattggaaaagggaaataatagattttaagtgttctc
ccaacaaaatgacaacagtatgaggtaatgcatctacagttcagcttgat
ttacccatcctacaatatatttcataacaccatgcagtatatggttagtg
tgccaatttattatgtaaatttgaaatatttttaaagtctgtggcatgac
attatttgtttgaaatatagtttggaactatatacctaacattataaacc
tttgttttataaactacttatatgcttccatgtgtacactcatgacttgc
aagtgttgtacaggcatatggactaatagataggaataccatatggaata
atttctaatgtatttttgttgtatcagccatttaccggtttttaactgtg
ggtggtgggggggtgggtggtgc

gaattctctaacttgttatgatctataaaggaaataacactaaatttatt
tgagaaccaaatatgttgatataaaaggtaatttttcatctatcatcatt
ctcctgttattcttaaaatattatattttaagcttatctactttcacata
gtccaagaataatagttttctttgactgattgattataggaatctcactt
acctactacacctgaagtatgacattttaaattgcatactcctttcattt
acagtgcttaaggaaatttttattttgttctgcaatttttcatttagaga
tgaaacatcatatttgtatggattccattgatacctgtgcaaatcaagaa
gtattatcactcttggttctgcagcaatgatcttagataggcaaagcaaa
ggcatacagaggagttcctccctggtgttccagggtagcataatgtgagg
atacctgcttccacggaaaagaatgagctcagaggacaataatctctcct
gtttcaactccttgaacatggctttacttactcatctttatttgtccctc
ctcttttctcatgaaactgtgagttttgggaatccctagagcccagtgct
gtccttttgctaatgttaaacattctcaactgctcttagcctctgctccc
acttccacagtgacatactctgatgccatgtcctgcacttgctcataaac
tacaggtctctacattcattcacttgtcccgaacctatattcattacctt
tcttggttttgtgaccaaacccctaagaaaagcaacttaaagaaagaagt
gtttgtcttggcttcctgtttgggagatacagtccatcacagtcatgaaa
tggtgataccaatggcatgaggcagggggctacattttcatcggtgacca
ggacaaagagaagggtgaatattgaataatcagcttgccgtttccttttt
tattcagtccaatggagtgtgccaccccatgttaagaataggttttccca
cctcatttaacttgatctaggaactccttttgcacctcagttacttccac
tgttctcttcagaacccaaaacagagcctgaaggtgcagtagaccctcaa
tgaggttgtttgggtttggtttgcttgattatgtttttaccccggttgcc
tacagcgaatcttcagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_8074323_8075330
seq2: B6Ng01-232A08.b_44_1065 (reverse)

seq1  CACCA------CCACCACCA-CCACAGTTAAAA--CCGTAAAT-GCTGAT  40
      |||||      || |||||| ||||||||||||  | |||||| ||||||
seq2  CACCACCCACCCCCCCACCACCCACAGTTAAAAACCGGTAAATGGCTGAT  50

seq1  ACAAC-AAAATACATTAG-AATTA-TCCATATGGTATTCCTATCTATTAG  87
      ||||| |||||||||||| ||||| |||||||||||||||||||||||||
seq2  ACAACAAAAATACATTAGAAATTATTCCATATGGTATTCCTATCTATTAG  100

seq1  TCCATATGCCTGTAC-ACACTTGCAAGTCATGAGTGTACACATGGAAGCA  136
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TCCATATGCCTGTACAACACTTGCAAGTCATGAGTGTACACATGGAAGCA  150

seq1  TATAAGTAGTTTATAAAACAAAGGTTTATAATGTTAGGTATATAGTTCCA  186
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGTAGTTTATAAAACAAAGGTTTATAATGTTAGGTATATAGTTCCA  200

seq1  AACTATATTTCAAACAAATAATGTCATGCCACAGACTTTAAAAATATTTC  236
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATATTTCAAACAAATAATGTCATGCCACAGACTTTAAAAATATTTC  250

seq1  AAATTTACATAATAAATTGGCACACTAACCATATACTGCATGGTGTTATG  286
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTACATAATAAATTGGCACACTAACCATATACTGCATGGTGTTATG  300

seq1  AAATATATTGTAGGATGGGTAAATCAAGCTGAACTGTAGATGCATTACCT  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATATTGTAGGATGGGTAAATCAAGCTGAACTGTAGATGCATTACCT  350

seq1  CATACTGTTGTCATTTTGTTGGGAGAACACTTAAAATCTATTATTTCCCT  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTGTTGTCATTTTGTTGGGAGAACACTTAAAATCTATTATTTCCCT  400

seq1  TTTCCAATAATAACATCACTTTAAACTGCAGTCACTATGACATTCTCTTG  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAATAATAACATCACTTTAAACTGCAGTCACTATGACATTCTCTTG  450

seq1  AACACATTCTTAATTTAAACTTTATAATTTTGGCCAGTATCTTCCGACTC  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATTCTTAATTTAAACTTTATAATTTTGGCCAGTATCTTCCGACTC  500

seq1  CTTCCATCATATCTATAATATTAAACCTCAGAAATCTGATTTTTCAAGGG  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATCATATCTATAATATTAAACCTCAGAAATCTGATTTTTCAAGGG  550

seq1  TAAAATAAGATATTGTCAAGATACACATTTTAACAACAATAAGCACAAGG  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAAGATATTGTCAAGATACACATTTTAACAACAATAAGCACAAGG  600

seq1  ATTACAAATTAAAATACATGAAACTGACTGCTAATCAAATCAGTGTACCA  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAAATTAAAATACATGAAACTGACTGCTAATCAAATCAGTGTACCA  650

seq1  CATTTCAGAGTTAAGAGGGTCTTAATGAACATGCATTCGTTTTCTGCAAG  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCAGAGTTAAGAGGGTCTTAATGAACATGCATTCGTTTTCTGCAAG  700

seq1  GAAACAATGAAATTGAATCTTTCCCAAAATGTGTTGCTAACAATACTAAA  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAATGAAATTGAATCTTTCCCAAAATGTGTTGCTAACAATACTAAA  750

seq1  AGCTGGATGGGGGAAAAAAATGTCCCAAACCCCCATGGAGATTCTGGTAA  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGATGGGGGAAAAAAATGTCCCAAACCCCCATGGAGATTCTGGTAA  800

seq1  CAGTTCTTTAACTCAGAATCACCAGGATCTCTTTGCTAACTTGCCCTGTA  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCTTTAACTCAGAATCACCAGGATCTCTTTGCTAACTTGCCCTGTA  850

seq1  AATGCCTAAAGGGACATTGTCTTCAGGATGGGGACCATCTTTACTGACTC  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCTAAAGGGACATTGTCTTCAGGATGGGGACCATCTTTACTGACTC  900

seq1  AAGAGATCTCCGCATGGATCAGAGCTTTACAGAACTCATTTGGATAGGTT  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGATCTCCGCATGGATCAGAGCTTTACAGAACTCATTTGGATAGGTT  950

seq1  GGTCGACAGACTTTATCTGAAGTTCATAAAAGAAAATTCTACTTGAAGAA  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCGACAGACTTTATCTGAAGTTCATAAAAGAAAATTCTACTTGAAGAA  1000

seq1  TATCCTAATTTCTAATGAATTC  1008
      ||||||||||||||||||||||
seq2  TATCCTAATTTCTAATGAATTC  1022


seq1: chr4_7902932_7904091
seq2: B6Ng01-232A08.g_69_1236

seq1  GAATTCTCTAACTTGTTATGATCTATAAAGGAAATAACACTAAATTTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAACTTGTTATGATCTATAAAGGAAATAACACTAAATTTATT  50

seq1  TGAGAACCAAATATGTTGATATAAAAGGTAATTTTTCATCTATCATCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAACCAAATATGTTGATATAAAAGGTAATTTTTCATCTATCATCATT  100

seq1  CTCCTGTTATTCTTAAAATATTATATTTTAAGCTTATCTACTTTCACATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGTTATTCTTAAAATATTATATTTTAAGCTTATCTACTTTCACATA  150

seq1  GTCCAAGAATAATAGTTTTCTTTGACTGATTGATTATAGGAATCTCACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAAGAATAATAGTTTTCTTTGACTGATTGATTATAGGAATCTCACTT  200

seq1  ACCTACTACACCTGAAGTATGACATTTTAAATTGCATACTCCTTTCATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACTACACCTGAAGTATGACATTTTAAATTGCATACTCCTTTCATTT  250

seq1  ACAGTGCTTAAGGAAATTTTTATTTTGTTCTGCAATTTTTCATTTAGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGCTTAAGGAAATTTTTATTTTGTTCTGCAATTTTTCATTTAGAGA  300

seq1  TGAAACATCATATTTGTATGGATTCCATTGATACCTGTGCAAATCAAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACATCATATTTGTATGGATTCCATTGATACCTGTGCAAATCAAGAA  350

seq1  GTATTATCACTCTTGGTTCTGCAGCAATGATCTTAGATAGGCAAAGCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTATCACTCTTGGTTCTGCAGCAATGATCTTAGATAGGCAAAGCAAA  400

seq1  GGCATACAGAGGAGTTCCTCCCTGGTGTTCCAGGGTAGCATAATGTGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATACAGAGGAGTTCCTCCCTGGTGTTCCAGGGTAGCATAATGTGAGG  450

seq1  ATACCTGCTTCCACGGAAAAGAATGAGCTCAGAGGACAATAATCTCTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTGCTTCCACGGAAAAGAATGAGCTCAGAGGACAATAATCTCTCCT  500

seq1  GTTTCAACTCCTTGAACATGGCTTTACTTACTCATCTTTATTTGTCCCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAACTCCTTGAACATGGCTTTACTTACTCATCTTTATTTGTCCCTC  550

seq1  CTCTTTTCTCATGAAACTGTGAGTTTTGGGAATCCCTAGAGCCCAGTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTCTCATGAAACTGTGAGTTTTGGGAATCCCTAGAGCCCAGTGCT  600

seq1  GTCCTTTTGCTAATGTTAAACATTCTCAACTGCTCTTAGCCTCTGCTCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTTTGCTAATGTTAAACATTCTCAACTGCTCTTAGCCTCTGCTCCC  650

seq1  ACTTCCACAGTGACATACTCTGATGCCATGTCCTGCACTTGCTCATAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCACAGTGACATACTCTGATGCCATGTCCTGCACTTGCTCATAAAC  700

seq1  TACAGGTCTCTACATTCATTCACTTGT-CCGAACCTATATTCATTACCTT  749
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TACAGGTCTCTACATTCATTCACTTGTCCCGAACCTATATTCATTACCTT  750

seq1  TCTTGGTTTTGTGACCAAACCCCTAAGAAAAGCAACTTAAAGAAAGAAGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGTTTTGTGACCAAACCCCTAAGAAAAGCAACTTAAAGAAAGAAGT  800

seq1  GTTTGTCTTGGCTTCCTG-TTGGGAGATACAGTCCATCACAGTCATGAAA  848
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GTTTGTCTTGGCTTCCTGTTTGGGAGATACAGTCCATCACAGTCATGAAA  850

seq1  TGGTGATACCAATGGCATGAGGCAGGGGGCTACA-TTTCATCGGTGACCA  897
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TGGTGATACCAATGGCATGAGGCAGGGGGCTACATTTTCATCGGTGACCA  900

seq1  GGACAAAGAGAAGGGTGAATATTG-ATAATCAGCTTGCCGTTTCC-TTTT  945
      |||||||||||||||||||||||| |||||||||||||||||||| ||||
seq2  GGACAAAGAGAAGGGTGAATATTGAATAATCAGCTTGCCGTTTCCTTTTT  950

seq1  TATTCAGTCC-ATGGAGTGGTGCCA-CCCATGTTTAAGATAGGTTTTCCC  993
      |||||||||| ||||||| |||||| |||||||| |  ||||||||||||
seq2  TATTCAGTCCAATGGAGT-GTGCCACCCCATGTTAAGAATAGGTTTTCCC  999

seq1  ACCTCATTTAACTTGATCTAGGAACTCC-TTTGCA-CTCAG-TAC-TCCA  1039
      |||||||||||||||||||||||||||| |||||| ||||| ||| ||||
seq2  ACCTCATTTAACTTGATCTAGGAACTCCTTTTGCACCTCAGTTACTTCCA  1049

seq1  CTGTTCTC-TCAGAACCC-AAACAGAGGCTG-AGGTGCAGTAGAACCTCA  1086
      |||||||| ||||||||| |||||||| ||| |||||||||||| |||||
seq2  CTGTTCTCTTCAGAACCCAAAACAGAGCCTGAAGGTGCAGTAGACCCTCA  1099

seq1  ATGAGGTTTGTTTTGGTTTGTTTTGTTTTGTTTTTGTTTTTTACGCGGTT  1136
      |||||| |||||| |||||| ||||  ||| || |||||||  | |||||
seq2  ATGAGG-TTGTTTGGGTTTGGTTTG-CTTGATTATGTTTTTACCCCGGTT  1147

seq1  GCTATACAGCCGATTCTTTCAGGA  1160
      ||  ||||| ||| || |||||||
seq2  GC-CTACAG-CGAATC-TTCAGGA  1168


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