BAC Information

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BAC

Clone NameB6Ng01-232E18
Chromosome4 (Build37)
Map Location 84,534,892 - 84,535,985
singlet/doubletsinglet
Overlap geneD530005L17Rik
Upstream geneLOC668010, Bnc2, LOC100040660, LOC624465, LOC100040284
Downstream geneLOC622811, LOC100040303, Sh3gl2, A930009N24
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232E18.bB6Ng01-232E18.g
ACCGA044669GA044670
length1,0631,104
definitionB6Ng01-232E18.b B6Ng01-232E18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatggagtataaagaaaaaaaaagtaagagctcaataaaattaag
gacttagccatcctgattggtataaggtgggatcacagggtcattttgat
ttgcatttccctgataactaaggtctttcaacccttctttaagtgcttct
cagccattcaagattcctctgtttaagacaaaaaacctagcatagcaaaa
actcttctcaaaaataaaagaacctctggtggaattaccatgcctgacct
aaagctgtcctacagaacaattgtgataaaaactgcatggtactggtata
gcgacagacaagtagaccaatggaatagaattgaagacccagaaatgaac
ccacacacctatggtcacttgatctttgacaagggagctaaaaccatcca
gtggaaaaaagacagcattttcaacaaatggtgctggcacaactggcggt
tatcatgtagaagaatgcgaattgatccattctaatctccttgtactaag
gtcaaatctaagtggattaaggaactccacataaaaccagagacactgaa
acttatagaggagaaagtagggaaaagcctcaaagatatgggtacagggg
gaaaattcctgaatagaacagcaatggcttgtgctgtaagatctagaatc
gacaaatgggacctcataaaattgcaaagcttctgcaaagcaaaagacac
ccgtcaataagacaaaaaggccaccaacagattgggaaaggatctttacc
tatctccaaatcagataggggactaatatccaatatatataaaagaactc
aagaaggtggactccagaaaatcaaataaccccattaaaaatggggctca
gagctaacaaagaattctcacttgaggaataccgaatggctgagaagcac
ctgaaaaatgttcaacattcttagtcatcaggaaatgcaaatcaaaacca
cccctgagattcccccctccacaccatccagaatggctaagatgaaaaat
ccatgtgaccaaagaatgctggtgaaggatgtggaagaaagagggaaccc
ttccttccatatg
gaattccatggcttagtctctgctaaagagagtgtagaagggatgctgta
tttctgggagtccttcctgttgtctggctgtgtacttgacaggctgccct
gaaagagaactccctgagctgactcggttctcctcattacgtaactgcag
agagtacttgaaaacctgagatgactttgccagagtagaggaagttgagg
aataagttgaaagttttcatttattcttcaatattgccctgtagggatgc
tcagtcatttaactgtagattatggtgcctctccgtggtcattagaaaca
ccggagtggtgctggtacccctcatcacccatttagtatgcagtagtccc
ctgacagttagcacagtgattaacacacttgctttcctattaaatggatt
tcattatgtttcctaaatgggaagctaaacatatggatatcttttcatcc
ccttgttttttttttttttttttttttcctggaatcaagctcctctaacc
tgtgtatcctttttttatgacttcagctgtgttcttgtttggagtctcta
gccctggggtcattctaatattgtatgttatttttcatgttaagatctgt
aatacatgctggtttatgcctaattttaccatcttttattattgtagacc
cctacaatattgtaattggctcttcttcatgtggctgtgtgtccagttta
tcactcacacttcccttttgatgaccagagttatgtcttttgtttaagct
cccagattgcttcttcagtatactgagattaaaatatttcccatttcaat
ttttaaatgtgaagctgggtaagccttctttgaaaagtcttggctgttga
attggatatttttgtgatcttactccttattcttcttaatatttttccaa
ctttaaaaagctattccttaatttttacttgcttttttgggtgagcagaa
gtaatagtggaaatatcactaggctatttttctcatcctttcataaattt
ccattattacttttaaatataactaatttgtattttgtagaaaaactatg
tatatatatttataaatacaataccatatttggaggtaatgtctctcaac
tcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_84534892_84535985
seq2: B6Ng01-232E18.g_70_1173

seq1  GAATTCCATGGCTTAGTCTCTGCTAAAGAGAGTGTAGAAGGGATGCTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGGCTTAGTCTCTGCTAAAGAGAGTGTAGAAGGGATGCTGTA  50

seq1  TTTCTGGGAGTCCTTCCTGTTGTCTGGCTGTGTACTTGACAGGCTGCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGGAGTCCTTCCTGTTGTCTGGCTGTGTACTTGACAGGCTGCCCT  100

seq1  GAAAGAGAACTCCCTGAGCTGACTCGGTTCTCCTCATTACGTAACTGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGAACTCCCTGAGCTGACTCGGTTCTCCTCATTACGTAACTGCAG  150

seq1  AGAGTACTTGAAAACCTGAGATGACTTTGCCAGAGTAGAGGAAGTTGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTACTTGAAAACCTGAGATGACTTTGCCAGAGTAGAGGAAGTTGAGG  200

seq1  AATAAGTTGAAAGTTTTCATTTATTCTTCAATATTGCCCTGTAGGGATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGTTGAAAGTTTTCATTTATTCTTCAATATTGCCCTGTAGGGATGC  250

seq1  TCAGTCATTTAACTGTAGATTATGGTGCCTCTCCGTGGTCATTAGAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCATTTAACTGTAGATTATGGTGCCTCTCCGTGGTCATTAGAAACA  300

seq1  CCGGAGTGGTGCTGGTACCCCTCATCACCCATTTAGTATGCAGTAGTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGAGTGGTGCTGGTACCCCTCATCACCCATTTAGTATGCAGTAGTCCC  350

seq1  CTGACAGTTAGCACAGTGATTAACACACTTGCTTTCCTATTAAATGGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAGTTAGCACAGTGATTAACACACTTGCTTTCCTATTAAATGGATT  400

seq1  TCATTATGTTTCCTAAATGGGAAGCTAAACATATGGATATCTTTTCATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATGTTTCCTAAATGGGAAGCTAAACATATGGATATCTTTTCATCC  450

seq1  CCTTGTTTTTTTTTTTTTTTTTTTTTTCCTGGAATCAAGCTCCTCTAACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTTTTTTTTTTTTTTTTTTTTTTCCTGGAATCAAGCTCCTCTAACC  500

seq1  TGTGTATCCTTTTTTTATGACTTCAGCTGTGTTCTTGTTTGGAGTCTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATCCTTTTTTTATGACTTCAGCTGTGTTCTTGTTTGGAGTCTCTA  550

seq1  GCCCTGGGGTCATTCTAATATTGTATGTTATTTTTCATGTTAAGATCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGGGGTCATTCTAATATTGTATGTTATTTTTCATGTTAAGATCTGT  600

seq1  AATACATGCTGGTTTATGCCTAATTTTACCATCTTTTATTATTGTAGACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATGCTGGTTTATGCCTAATTTTACCATCTTTTATTATTGTAGACC  650

seq1  CCTACAATATTGTAATTGGCTCTTCTTCATGTGGCTGTGTGTCCAGTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACAATATTGTAATTGGCTCTTCTTCATGTGGCTGTGTGTCCAGTTTA  700

seq1  TCACTCACACTTCCCTTTTGATGACCAGAGTTATGTCTTTTGTTTAAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCACACTTCCCTTTTGATGACCAGAGTTATGTCTTTTGTTTAAGCT  750

seq1  CCCAGATTGCTTCTTCAGTATACTGAGATT-AAATATTTCCCATTTCAAT  799
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CCCAGATTGCTTCTTCAGTATACTGAGATTAAAATATTTCCCATTTCAAT  800

seq1  TTTT-AATGTGAAGCTGGGTAAGCCTTC-TTGAAAAGTCTTGGCTGTTGA  847
      |||| ||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTTTAAATGTGAAGCTGGGTAAGCCTTCTTTGAAAAGTCTTGGCTGTTGA  850

seq1  ATT-GATATTTTTGTGATCTTACTCCTTATTCTTCTTAATATTTTTCCAA  896
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGATATTTTTGTGATCTTACTCCTTATTCTTCTTAATATTTTTCCAA  900

seq1  C-TTAAAAAGCTA-TCCTTAATTTTTACTTGC-TTTTTGGTTGAGCAGAA  943
      | ||||||||||| |||||||||||||||||| ||||||| |||||||||
seq2  CTTTAAAAAGCTATTCCTTAATTTTTACTTGCTTTTTTGGGTGAGCAGAA  950

seq1  GTAAATAGT-GAAATATCACTAGGCTA-TTTTCTCATCC-TTCAT-AATT  989
      || |||||| ||||||||||||||||| ||||||||||| ||||| ||||
seq2  GT-AATAGTGGAAATATCACTAGGCTATTTTTCTCATCCTTTCATAAATT  999

seq1  TCCATTTATACTTTTAAAATATAACT-ATTTGTA-TTTGTAGAAAAATAT  1037
      ||||||  ||||||| |||||||||| ||||||| ||||||||||||  |
seq2  TCCATTATTACTTTT-AAATATAACTAATTTGTATTTTGTAGAAAAA-CT  1047

seq1  ATGTATATATA-TTATAAATAAACAAATACATA-TTGGAGGTAATGTACT  1085
      ||||||||||| ||||||||  ||||   |||| ||||||||||||| ||
seq2  ATGTATATATATTTATAAAT--ACAATACCATATTTGGAGGTAATGT-CT  1094

seq1  C-AAACTCAA  1094
      |  |||||||
seq2  CTCAACTCAA  1104