BAC Information

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BAC

Clone NameB6Ng01-232G13
Chromosome4 (Build37)
Map Location 54,206,754 - 54,207,931
singlet/doubletsinglet
Overlap genenone
Upstream gene4930522O17Rik, AI427809, LOC100041197, Slc44a1, Fsd1l, LOC666483, Fcmd, Tal2, LOC435784, Tmem38b, LOC670124, LOC100041280
Downstream geneLOC666901, LOC100041303, LOC384018, EG666920, Zfp462, LOC670211
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232G13.bB6Ng01-232G13.g
ACCGA044755GA044756
length1,1891,116
definitionB6Ng01-232G13.b B6Ng01-232G13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctggtctccctacacaagctacattctcagtgtaattggggggaa
aaaagagcaaagagaccaattcattgaatacttccgtctatatttggaga
agatacattttacatgcttcacgaggttaaatgtcccctgctcctgatta
caaaattctgattggcatattaatcagattataaaagtgggaggaggaag
aaccgctaaagagacagcggctgctcttttgctgctagatccattcagga
tataacattttttgctgagatatttattgtaaaatgttttttccctttcc
cctcttgcttttatttttagccaacattaccccagcatctgttccacctc
gtatgaggaatgcattgggataggggcgggaggccgaggagagaagtgta
cacacaaaaggtaggaaggcagaatggcaggaaaaggggcaaggtctcca
ctctcaccaaagatggaggacactgcagaatggcaggaagaggggcaagg
tctccaccctcaccaaaggcggaggacactggacagggctttgagtgtct
gctcttgacactcagattttcacattgaacttgagagacattcaggcaag
actctgattttatcagctgcgtaactacccagtcagtgcttgccccactt
ttgtttgcgtatgttcatgttcattgatgggagacccattacctttgaaa
gcagcggtagagaggaaatgaatagactgttgagctgggacacgttgcag
gaaataaaaaaggcaaaacaggagccagtgcaaattctgaggagcagcaa
ttcataggctgatgcggttctgagacacttgtgggttagaaagtcctttc
tttatccgtagatggagctcctgttcctcgttcctcttgtgacatatcta
ttgcctctccttggatttctcctctcagattctcctattcaagttaaatt
tccctgctagtttcatcacttctcccaagacagtgttgatcatcagcccc
agcttgacagacattcttactccatcatctccgtctattccaggatgtgg
gtttcagatcttaaattaagcagtttatctgaaaagggaacagcaaaccg
agacgatgcttgcttgcatggtgaatgcttccaattgtgcttcacccccc
gttgcccagagtccagtgttaaagccttggtgaccagga
gaattctatgctaaaaccatctggccctggactgtatttggtttggagac
ttttagttgctacttctacttcattgggggttatagttctgtttaaactg
catatctgttctttatttaactttggtaaacggtatatatgaagaaaatt
actcatttcttttagttttcaaattttgtgaagtacaggtttttaaagga
tatacttatacttctctgcctctcctccttgattcatccctaatttcatc
cctaattttgttaatttggatagtctctctaccttttaattaatttggct
aagagtttctcagtcttttgattgtctcaaaaaacaactctttgtttcat
tgattttttaatattgtgttttgtttgtttctgttttattgatttcattc
ctgagattgattattgcttgccatccacctcttttgggtgtaatttcagg
agtgctgttagattactagtataaaagctctacattttttaaatgtagga
atgtagtgctgtgaacttgccctgtcttcatgctttcccataagtttggg
tattttgtatactcattttcattcaattctagaaagtctttcatgccttt
attatgctgtatctttaccttttttgtttgtttgtttgttcagtatcaac
ttgttcagtttccatgactttgcaagctttcgggtgtttctgttgttgat
atccaactttaatctgtggtggtcaggtaggatatgcggtctaatttaaa
tttccttgtatacattgagactaactttgtgtctgaatatgtggcctatt
ttgggagaaagttccatgagctggtaagaagaaaccatactcttttgtgt
gagggtgaaatactctgcatctgttaggtccatttggtttataacatcag
ttagctctagcatttctctcttctgtttctgtctggatgatttgtccttt
ggtgagagtagggtattgaaagtttctactatcagtgtgtgggggtcatt
ctgtgattgagatgtagttgtgcatccttcaggaacttcgtctgaccttg
tgaatgtgcttctaatgttaagaattgcaatgtcttcttagaagaatcct
ttttctttatcggagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_54206754_54207931
seq2: B6Ng01-232G13.b_43_1231

seq1  GAATTCTGGTCTCCCTACACAAGCTACATTCTCAGTGTAATTGGGGGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGTCTCCCTACACAAGCTACATTCTCAGTGTAATTGGGGGGAA  50

seq1  AAAAGAGCAAAGAGACCAATTCATTGAATACTTCCGTCTATATTTGGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGCAAAGAGACCAATTCATTGAATACTTCCGTCTATATTTGGAGA  100

seq1  AGATACATTTTACATGCTTCACGAGGTTAAATGTCCCCTGCTCCTGATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACATTTTACATGCTTCACGAGGTTAAATGTCCCCTGCTCCTGATTA  150

seq1  CAAAATTCTGATTGGCATATTAATCAGATTATAAAAGTGGGAGGAGGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTCTGATTGGCATATTAATCAGATTATAAAAGTGGGAGGAGGAAG  200

seq1  AACCGCTAAAGAGACAGCGGCTGCTCTTTTGCTGCTAGATCCATTCAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGCTAAAGAGACAGCGGCTGCTCTTTTGCTGCTAGATCCATTCAGGA  250

seq1  TATAACATTTTTTGCTGAGATATTTATTGTAAAATGTTTTTTCCCTTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACATTTTTTGCTGAGATATTTATTGTAAAATGTTTTTTCCCTTTCC  300

seq1  CCTCTTGCTTTTATTTTTAGCCAACATTACCCCAGCATCTGTTCCACCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTGCTTTTATTTTTAGCCAACATTACCCCAGCATCTGTTCCACCTC  350

seq1  GTATGAGGAATGCATTGGGATAGGGGCGGGAGGCCGAGGAGAGAAGTGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAGGAATGCATTGGGATAGGGGCGGGAGGCCGAGGAGAGAAGTGTA  400

seq1  CACACAAAAGGTAGGAAGGCAGAATGGCAGGAAAAGGGGCAAGGTCTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAAAAGGTAGGAAGGCAGAATGGCAGGAAAAGGGGCAAGGTCTCCA  450

seq1  CTCTCACCAAAGATGGAGGACACTGCAGAATGGCAGGAAGAGGGGCAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCACCAAAGATGGAGGACACTGCAGAATGGCAGGAAGAGGGGCAAGG  500

seq1  TCTCCACCCTCACCAAAGGCGGAGGACACTGGACAGGGCTTTGAGTGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCACCCTCACCAAAGGCGGAGGACACTGGACAGGGCTTTGAGTGTCT  550

seq1  GCTCTTGACACTCAGATTTTCACATTGAACTTGAGAGACATTCAGGCAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTGACACTCAGATTTTCACATTGAACTTGAGAGACATTCAGGCAAG  600

seq1  ACTCTGATTTTATCAGCTGCGTAACTACCCAGTCAGTGCTTGCCCCACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGATTTTATCAGCTGCGTAACTACCCAGTCAGTGCTTGCCCCACTT  650

seq1  TTGTTTGCGTATGTTCATGTTCATTGATGGGAGACCCATTACCTTTGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGCGTATGTTCATGTTCATTGATGGGAGACCCATTACCTTTGAAA  700

seq1  GCAGCGGTAGAGAGGAAATGAATAGACTGTTGAGCTGGGACACGTTGCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCGGTAGAGAGGAAATGAATAGACTGTTGAGCTGGGACACGTTGCAG  750

seq1  GAAATAAAAAAGGCAAAACAGGAGCCAGTGCAAATTCTGAGGAGCAGCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAAAAAGGCAAAACAGGAGCCAGTGCAAATTCTGAGGAGCAGCAA  800

seq1  TTCATAGGCTGATGCGGTTCTGAGACACTTGTGGGTTAGAAAGTCC-TTC  849
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTCATAGGCTGATGCGGTTCTGAGACACTTGTGGGTTAGAAAGTCCTTTC  850

seq1  TTTATCCGTAGATGGAGCTCCTGTTCCTCGTTCCTCTTGTGACATATCTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCCGTAGATGGAGCTCCTGTTCCTCGTTCCTCTTGTGACATATCTA  900

seq1  TTGCCTCTCCTTGGATTTCTCCTCTCAGATTCTCCTATTCAAGTTAAATT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTCTCCTTGGATTTCTCCTCTCAGATTCTCCTATTCAAGTTAAATT  950

seq1  TCCCTGCTAGTTTCATCACTTCTCCCAAGACAGTGTTGATCATCAGCCCC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGCTAGTTTCATCACTTCTCCCAAGACAGTGTTGATCATCAGCCCC  1000

seq1  AGCTTGACAGACATTCTTACTCCATCATCTCCGTCTATTCCA-GATGTGG  1048
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGCTTGACAGACATTCTTACTCCATCATCTCCGTCTATTCCAGGATGTGG  1050

seq1  GTTTCAGATC-TAAATTAAGCAGTTTATCTGAGA--GGGACAGCAAACGG  1095
      |||||||||| ||||||||||||||||||||| |  || ||||||||| |
seq2  GTTTCAGATCTTAAATTAAGCAGTTTATCTGAAAAGGGAACAGCAAACCG  1100

seq1  AGACGATGC-TGC-TGCATTGTG-ATGCTTTCCATTGTGCTTCACCCCC-  1141
      ||||||||| ||| ||||| ||| |||||| | |||||||||||||||| 
seq2  AGACGATGCTTGCTTGCATGGTGAATGCTTCCAATTGTGCTTCACCCCCC  1150

seq1  -GTGCCCCAAGT-CAGTGTTAAGGCCTTGGTGACCAGGA  1178
        |||||  ||| ||||||||| ||||||||||||||||
seq2  GTTGCCCAGAGTCCAGTGTTAAAGCCTTGGTGACCAGGA  1189