BAC Information

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BAC

Clone NameB6Ng01-234F17
Chromosome4 (Build37)
Map Location 118,572,776 - 118,734,032
singlet/doubletdoublet
Overlap geneOlfr1329, Olfr1519, Lao1, LOC666703, OTTMUSG00000008833
Upstream geneIpo13, Artn, St3gal3, Jmjd2a, Ptprf, Hyi, BC059842, Med8, Elovl1, Cdc20, Mpl, Tie1, LOC545675, LOC666596, 2610528J11Rik, 6330530A05Rik, 1110020C03Rik, Ebna1bp2, LOC100041290, Olfr62, Olfr1343-ps1, Olfr1342, Olfr1341, Olfr1340, Olfr1339, Olfr1338, Olfr1524-ps1, Olfr1337, Olfr219-ps1, GA_x5J8B7W3BSW-40181-41086, Olfr1335, Olfr1333, GA_x5J8B7TQTH0-2-774, Olfr1332-ps1, Olfr1331, Olfr1330
Downstream geneSlc2a1, Zfp691, Ermap, Ccdc23, 4930538K18Rik, AU022252, Lepre1, Cldn19, Ybx1, Ppih, 1700041C02Rik, Ldha-ps2, LOC100041471, Ppcs, Zmynd12, BC057371, LOC666766, LOC384052, AA415398, Foxj3, Guca2a, Guca2b, Hivep3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-234F17.bB6Ng01-234F17.g
ACCGA046147GA046148
length1,065116
definitionB6Ng01-234F17.b B6Ng01-234F17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,732,980 - 118,734,032)(118,572,776 - 118,572,891)
sequence
gaattctagaagcactttgtagacaagaaatctcagtcatgggagcctag
cagtcctttactagatgtttgtcagcaatgaaatctctcaccagctccag
aaagccctataaggaaaaggcagtgagatgagatatttggaatgcagggt
ggaggggctgagggaagcctaagcctggtgttgagtttgactggatctgt
gcagagagatggagaagaaagactgggcaccaagggggtgaatggtacat
ctctatcggctataattaacatctccaagacacatctgcatgtgtgtgtg
tgtgtgtctgtgcacacatatgcatgtatgtatgccagtgcacatgtatg
catgtgtgtatctgcacatgtgtgcatgtttatgtgccagtgcaaatgca
tgcatgtgtgtgtgcctgtgcacaagtatacatgtgtatgtgtgcatctg
tgcctgtgcacatgtaagcatgttcttatagaggccagagatcatccttg
agtcttccctgggagtcattcaccttgttttctagatagcatatctcagt
gagacccacagatctcatattcagttaggctggctggccagtgagcccca
gggttcctcctgtctttgcctccccagcacaaatagtataagcccatgcc
accttggctggctttttaaggtggtgctaagtggtcgaactcaggtcttc
atacttgggtggcagacactttacctagcccccaaggcacattttgtgaa
catgatgcacagaccaggaacctttaaataaattatttttattacattta
tttagtgggggagggggcacccttggaggtcaggatacggcctgcaggag
tcagttctcttcttttgttcaggtttgtggaacccaaaggcaagccagcc
atcctttaccttttggagtcatcagcttccgagcacaaatcagccagggc
tctcccttaccttcctagcttcgacctacttaaggagtagtaataacatt
catttaaattaacttttgaatatctataattctaccctgtccatgtaatc
ggccatatttatcat
tatataggcatttgtccacagccaagagctgtatcaggcaagaagagcag
ggtagggaaggaaagaaaaaaggaaagagagagagagagagagagagaga
gagggagggagggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_118732980_118734032
seq2: B6Ng01-234F17.b_44_1108 (reverse)

seq1  ATGATAAATAATGACGA-TACATTGACA-GGTAG-ATTATAGATATT-AA  46
      ||||||||||  | ||| ||||| |||| ||||| |||||||||||| ||
seq2  ATGATAAATATGGCCGATTACATGGACAGGGTAGAATTATAGATATTCAA  50

seq1  AAG-TAATTTAAATGAATGTTATTACTACT-CTTAAGTAGGTCGAAGCTA  94
      ||| |||||||||||||||||||||||||| |||||||||||||||||||
seq2  AAGTTAATTTAAATGAATGTTATTACTACTCCTTAAGTAGGTCGAAGCTA  100

seq1  GGAAGGT-AGGGAGAG-CCTGGCTGATTTGTGCTCGGAAGCTGATGGCT-  141
      ||||||| |||||||| ||||||||||||||||||||||||||||| || 
seq2  GGAAGGTAAGGGAGAGCCCTGGCTGATTTGTGCTCGGAAGCTGATGACTC  150

seq1  CAAAAGGTAAAGG-TGGCTGGC-TGCCTTTGGGTTCCAC-AACCTGAACA  188
      ||||||||||||| |||||||| |||||||||||||||| ||||||||||
seq2  CAAAAGGTAAAGGATGGCTGGCTTGCCTTTGGGTTCCACAAACCTGAACA  200

seq1  AAAGAAGAGAACTGACTCCTGCAGGCCGTATCCTGACCTCCAAGGGTGCC  238
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGAGAACTGACTCCTGCAGGCCGTATCCTGACCTCCAAGGGTGCC  250

seq1  CCCTCCCCCACTAAATAAATGTAATAAAAATAATTTATTTAAAGGTTCCT  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCCCACTAAATAAATGTAATAAAAATAATTTATTTAAAGGTTCCT  300

seq1  GGTCTGTGCATCATGTTCACAAAATGTGCCTTGGGGGCTAGGTAAAGTGT  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGTGCATCATGTTCACAAAATGTGCCTTGGGGGCTAGGTAAAGTGT  350

seq1  CTGCCACCCAAGTATGAAGACCTGAGTTCGACCACTTAGCACCACCTTAA  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCACCCAAGTATGAAGACCTGAGTTCGACCACTTAGCACCACCTTAA  400

seq1  AAAGCCAGCCAAGGTGGCATGGGCTTATACTATTTGTGCTGGGGAGGCAA  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCAGCCAAGGTGGCATGGGCTTATACTATTTGTGCTGGGGAGGCAA  450

seq1  AGACAGGAGGAACCCTGGGGCTCACTGGCCAGCCAGCCTAACTGAATATG  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGAGGAACCCTGGGGCTCACTGGCCAGCCAGCCTAACTGAATATG  500

seq1  AGATCTGTGGGTCTCACTGAGATATGCTATCTAGAAAACAAGGTGAATGA  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTGTGGGTCTCACTGAGATATGCTATCTAGAAAACAAGGTGAATGA  550

seq1  CTCCCAGGGAAGACTCAAGGATGATCTCTGGCCTCTATAAGAACATGCTT  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAGGGAAGACTCAAGGATGATCTCTGGCCTCTATAAGAACATGCTT  600

seq1  ACATGTGCACAGGCACAGATGCACACATACACATGTATACTTGTGCACAG  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGCACAGGCACAGATGCACACATACACATGTATACTTGTGCACAG  650

seq1  GCACACACACATGCATGCATTTGCACTGGCACATAAACATGCACACATGT  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACACACATGCATGCATTTGCACTGGCACATAAACATGCACACATGT  700

seq1  GCAGATACACACATGCATACATGTGCACTGGCATACATACATGCATATGT  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATACACACATGCATACATGTGCACTGGCATACATACATGCATATGT  750

seq1  GTGCACAGACACACACACACACACATGCAGATGTGTCTTGGAGATGTTAA  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACAGACACACACACACACACATGCAGATGTGTCTTGGAGATGTTAA  800

seq1  TTATAGCCGATAGAGATGTACCATTCACCCCCTTGGTGCCCAGTCTTTCT  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGCCGATAGAGATGTACCATTCACCCCCTTGGTGCCCAGTCTTTCT  850

seq1  TCTCCATCTCTCTGCACAGATCCAGTCAAACTCAACACCAGGCTTAGGCT  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATCTCTCTGCACAGATCCAGTCAAACTCAACACCAGGCTTAGGCT  900

seq1  TCCCTCAGCCCCTCCACCCTGCATTCCAAATATCTCATCTCACTGCCTTT  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCAGCCCCTCCACCCTGCATTCCAAATATCTCATCTCACTGCCTTT  950

seq1  TCCTTATAGGGCTTTCTGGAGCTGGTGAGAGATTTCATTGCTGACAAACA  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTATAGGGCTTTCTGGAGCTGGTGAGAGATTTCATTGCTGACAAACA  1000

seq1  TCTAGTAAAGGACTGCTAGGCTCCCATGACTGAGATTTCTTGTCTACAAA  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTAAAGGACTGCTAGGCTCCCATGACTGAGATTTCTTGTCTACAAA  1050

seq1  GTGCTTCTAGAATTC  1053
      |||||||||||||||
seq2  GTGCTTCTAGAATTC  1065

seq1: chr4_118572776_118572891
seq2: B6Ng01-234F17.g_71_186

seq1  TATATAGGCATTTGTCCACAGCCAAGAGCTGTATCAGGCAAGAAGAGCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAGGCATTTGTCCACAGCCAAGAGCTGTATCAGGCAAGAAGAGCAG  50

seq1  GGTAGGGAAGGAAAGAAAAAAGGAAAGAGAGAGAGAGAGAGAGAGAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGGAAGGAAAGAAAAAAGGAAAGAGAGAGAGAGAGAGAGAGAGAGA  100

seq1  GAGGGAGGGAGGGAGG  116
      ||||||||||||||||
seq2  GAGGGAGGGAGGGAGG  116