BAC Information

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BAC

Clone NameB6Ng01-234L01
Chromosome4 (Build37)
Map Location 147,079,257 - 147,079,731
singlet/doubletsinglet
Overlap genenone
Upstream geneMGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100
Downstream geneLOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1, Frap1, Angptl7, Exosc10, LOC100043151, Srm, Masp2, Tardbp, Gm572
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-234L01.bB6Ng01-234L01.g
ACCGA046383GA046384
length4641,200
definitionB6Ng01-234L01.b B6Ng01-234L01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tgacagagatggagttccagttgatcgtgtcttttccactgggttttatc
aactgagttgttctacaaagtggtttcataaatgtaagcaaacactgcag
ggcattgacaataaaggtgttgctttttagaaactgacaataagtcttca
ttgttaacaagcagacttacacaactcactgtgtatgaagaggtcaagct
ggtgcctccaagaacattggctcttatgttccacagtcctcattatggaa
agggctttgcaagcaacaaaaagtgaaatatataacagaaccaacaaaaa
agacattgatctaaaatttgtccttcctccaaaatatgctaggtcaatga
tgtcatgaatttatcgtgaataaccaatcaatatctaatttgacttaaat
acccaaagcacccttgtgattatatatatatatatatatatgtgtgtgtg
tgtatatatatata
gaattcatacaggagagaaaccttacaaatgcagtgagtgtgacaaatgt
tttaccgaaccatcccatcttagtattcatcgtagaattcattcaggaga
gaaaccttacaaatgtagtgaatgcgacaaatgctttactgacaaaggca
gtctgagagttcatcagagaattcatacaggagagaaaccgtaccaatgc
agtgagtgtgacaaatgctttactgacaaaagcagtcttagagttcatca
tagaattcatgcaggagagaaaccttacaaatgtagtgaatgcgacaaat
gctttactgacaaaggctatctgagagttcatcatagaattcatgcagga
gagaaatcttacaaatgtagtgaatgtgacaaatgctttactcacaaagg
ctctctgagagttcatcatagaattcatgcaggagagaaaccttacaaat
gtagtgaatgtgacaaatgttttactgagaaaaacggtctgagaaggcat
cagagaattcatacaggagagaaaccttataaatgcagtgaatgtgacaa
atgctttacccgaaaatcacatcttagtattcatcagagaattcatacag
gagagaaactgtacaaatgcagtgaatgtgacaaatgctttacccaacaa
tgccatcttagtattcatcagaaaattcattcaggagagaatcttacaaa
tgcaatgaatgcgacaaatgctttactgacaaacacagtctgagaaggca
tcagataattcatacaggagagaaaccttacaaatgtaatgaatgtgaca
aatcctttactgaaaatggctgtctgagaattcatcagagaattcataca
ggagagaaaccttacaaatgtagtgaatgtgacaaatgctttactaaaaa
atcccagtttgaggattcatcagagatttcatacaggagagaaaccttta
caaatgtagtgaatgtgacaaatgttttattaaaaaatgcagtctgatat
ttcatcagagattcatacaggagagaaaccttacaatgtagtgaatgtga
caaagctttactgagaaagtcagatggcatcagagaactcatacagggag
attcttacaaatgtatggaatgttgaccaatgtttggctagaattcgatc
ctgctttaatccacaggaatttccatatcacatattagaagagaggctca

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_147079257_147079731
seq2: B6Ng01-234L01.b_43_512

seq1  GAATTCTGACAGAGATGGAGTTCCAGTTGATCTTGTCTTTTCCATTGGGT  50
      |||||||||||||||||||||||||||||||| ||||||||||| |||||
seq2  GAATTCTGACAGAGATGGAGTTCCAGTTGATCGTGTCTTTTCCACTGGGT  50

seq1  TTTATCAACTGAGTTGTTCTACAAAGTGGTTTCATAAAAATAAGCAAACA  100
      ||||||||||||||||||||||||||||||||||||||  ||||||||||
seq2  TTTATCAACTGAGTTGTTCTACAAAGTGGTTTCATAAATGTAAGCAAACA  100

seq1  CTGCATGGCATTGACAACAAAGGTGTTGCTTTTTACAAACTGACAATAAG  150
      ||||| ||||||||||| ||||||||||||||||| ||||||||||||||
seq2  CTGCAGGGCATTGACAATAAAGGTGTTGCTTTTTAGAAACTGACAATAAG  150

seq1  TCTTCATTGCTAAGGAGCAGACTTACACAACTCACTATGTGTGAAGAGGT  200
      ||||||||| |||  ||||||||||||||||||||| ||| |||||||||
seq2  TCTTCATTGTTAACAAGCAGACTTACACAACTCACTGTGTATGAAGAGGT  200

seq1  CAAGCATGTGCCTCCAAGCACATTGGCTTTTATGTTCCAGAGTACTGGTT  250
      |||||  ||||||||||| ||||||||| |||||||||| ||| ||  ||
seq2  CAAGCTGGTGCCTCCAAGAACATTGGCTCTTATGTTCCACAGTCCTCATT  250

seq1  ATGGGAAGGGTTTTGCTATCTACAAAAAGTGAAATGTATATATAGAACCA  300
      |||| ||||| ||||| | | |||||||||||||| |||| | |||||||
seq2  ATGGAAAGGGCTTTGCAAGCAACAAAAAGTGAAATATATA-ACAGAACCA  299

seq1  ACCAAAAAGACATTGATCTAAAATTTGTCCTTCCTCCAAAATATGCTAGG  350
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAAGACATTGATCTAAAATTTGTCCTTCCTCCAAAATATGCTAGG  349

seq1  TCAATGATGTCATGAATTTATTGTGAATAACCAATCAATATCTAATTTGA  400
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TCAATGATGTCATGAATTTATCGTGAATAACCAATCAATATCTAATTTGA  399

seq1  CTTAAATACCCAAAGCACCCTTGTGAAAAGTTTTATATATATATGTATAT  450
      ||||||||||||||||||||||||||    || ||||||||||| |||||
seq2  CTTAAATACCCAAAGCACCCTTGTGA----TTATATATATATATATATAT  445

seq1  ATATATATGCATTTATATATATACA  475
      || | | ||  | |||||||||| |
seq2  ATGTGTGTGTGTGTATATATATATA  470