BAC Information

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BAC

Clone NameB6Ng01-235C14
Chromosome4 (Build37)
Map Location 72,330,222 - 72,331,415
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667638, EG667649, Tle1
Downstream geneAldoa-ps2, EG384113, LOC667713, LOC100039698, OTTMUSG00000001246, LOC100039726, LOC667722, LOC623115, OTTMUSG00000000281, OTTMUSG00000000280, OTTMUSG00000000282, OTTMUSG00000000283, Gm428
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-235C14.bB6Ng01-235C14.g
ACCGA046713GA046714
length1,2071,092
definitionB6Ng01-235C14.b B6Ng01-235C14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagttgaactcaattgcagttcaccaaatgcactcgttgcactga
ttcaactccactcctctgaactgactcacaactgactcaacttccaactg
tttttctttctttgtgctgtttgtaaatagcttctttcctgtgctgttct
tgtgagacttgggcatattctatctctgattcattcatttaaatatttct
cagattctttattttgtctgcccctcactttcaaacatggctacttgctt
ctacaaactaatcttaccttaaaggtgtgtcgtcctgccagagagaataa
gggtctgtggcatttctgcatgccagctggtccatgtaggtctctgatgc
aatttcctgccagagcagccattctaatgaaccgaaactgttctacatat
atatatacatacacagcgtgtgcacacacatacacacatacacacacaca
cacacacacacacactatatatatatatatacatatatacatgcgtgtgt
atatatatatatatatatatatacatatatatatatatggtgttactttc
aaatattgtctaataaatttgtagataaacagagaaaaatcaggaaagga
aaacaaacaaaaaaggcactgccactgccacagctagataaccacaaaca
tcagaaaacaagaatagatactgaacaccttcattttaatacagtaattt
aagaatacatccagaagaactagtctaatattctattgtttattccatcc
cattaaaatgtcttcctaattattcatatttatgtggattcttatctgac
aacttctgaaatattttgacattcattctctcatattcagtgataaatgc
ataaacaaacagatgtaatcagcttttagaggagaaattcagtgggttca
gctgggatttcatgtcccacttttgggatgattcatatttttaaaatatg
gttgtttaaagtgcctctgttaaagacttgaaaattgtttcaatatacac
taatgcaaaggtattaaggcacagaaaggggatttttacatggtaattgc
cattatgattgacaaattgaatgtgttagttccatgcttggggagctctg
gaaaacaaaatattactccaggaatattattgggttgcaatcatatctcc
attatgaaaatattctaaccttggacatcaagagcctcatacatacatcc
atatatt

gaattcatgggcacagagggaaattttataaactgaaccccagaggctca
tgctctaagatcatgaattaattattgggatctcataaaactggaaagct
tctgtaaggcaaaagacatagtcaataagacaaatcagcaacctactgat
tggaaaaaaaatcttcactaaccccacatctgagagaggaataatattca
aaatatataaaaaattcaataagttaatcaccaaaaaaacccccaaacaa
cccaatcaaaaaattggcttatagaactaggctacgagaattcacaactg
aggaatctcaaatggccgagaaacacctaaagaaatgttcaaagtcctga
gtgatcagagaaatgcaaatcaaaatgaccaagagattctaccttacacc
aatcagaatggctaagatcaaaacatcaggtgacaacatatgttggagag
gatctggaaaaagaggattgctggtgggattgtaaacttgtacaaccact
ctggaaatcaatctggaggttcctcagaatattggaaatagatctacctg
aagacccagctgtacaactcttgggaatatacccaaaagatgccccacca
tgccacaggggtacccattccactatgttcatagtggccttatttgtgat
agccagaagcggaaaacaacctagatgtcccacgaccgaagaatgaatac
aaaaaaatgtggttcattcacacaatggaatactacttagctgcaaagga
ggacatcctgacttttgcaggtaaatggatggaactagaaaatatcatcc
tgagtgaggtaactcagacccaaaaggacatgcatggtatgtactcacta
ataagtgagtattagcgataaaaaaaataaaaaagaaaaataaacataaa
aaagaaatcagaaaagaaaaaaacctatacagccataaggaatacacaag
atagaatcacagaattgaaagggaaccagctgaaaagcccaggtgaggat
gcttcagtcacttggaagagagaaagaaagaaatccaagtgggatggagg
gaggacttggggaagaaaaggtggacaggaatgggggtttac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_72330222_72331415
seq2: B6Ng01-235C14.b_44_1250 (reverse)

seq1  AATATATGGATGTATGTAGGAGCTCTTTTAATGGTCCCAAGTAAGAAAAT  50
      |||||||||||||||||| |||  || || || |||| | || |||| ||
seq2  AATATATGGATGTATGTATGAG-GCTCTTGAT-GTCCAAGGTTAGAATAT  48

seq1  GATTCTATATTGAGATATGATTACAA-CCAAT-ATATTCTTGGAGTAATA  98
        |||   || ||||||||||| ||| ||||| |||||| ||||||||||
seq2  -TTTCATAATGGAGATATGATTGCAACCCAATAATATTCCTGGAGTAATA  97

seq1  TTTTGTTTTCAGAAGCTCAC--AGCATGGACTTAACACATTC-ATTTGTC  145
      ||||||||||   ||||| |  ||||||||  |||||||||| |||||||
seq2  TTTTGTTTTCCAGAGCTCCCCAAGCATGGAACTAACACATTCAATTTGTC  147

seq1  AATCAT-ATGGCAATTACCATGTAAAAATCCCCTTTCTGTG-CTTAATAC  193
      |||||| |||||||||||||||||||||||||||||||||| ||||||||
seq2  AATCATAATGGCAATTACCATGTAAAAATCCCCTTTCTGTGCCTTAATAC  197

seq1  TTTTGCATTAGTGTATATTGAA--CATTTTCAAGTCTTTAACAGAGGCAC  241
       |||||||||||||||||||||   |||||||||||||||||||||||||
seq2  CTTTGCATTAGTGTATATTGAAACAATTTTCAAGTCTTTAACAGAGGCAC  247

seq1  TTAAAACAA-CATATTTTAAAAATATGAATCATCCC-AAAGT-GGACATG  288
      || |||||| |||||||||||||||||||||||||| ||||| |||||||
seq2  TTTAAACAACCATATTTTAAAAATATGAATCATCCCAAAAGTGGGACATG  297

seq1  AAAT-CCAGCTGAA-CCACTGAATTTCTCCTCT-AAAGCTGATTACATCT  335
      |||| ||||||||| |||||||||||||||||| ||||||||||||||||
seq2  AAATCCCAGCTGAACCCACTGAATTTCTCCTCTAAAAGCTGATTACATCT  347

seq1  GTTTGTTTATGCA-TTATCACTGAATATGAGAGAATGAATGTCAAAATAT  384
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTATGCATTTATCACTGAATATGAGAGAATGAATGTCAAAATAT  397

seq1  TTCAGAAGTTGTCAGATAAGAATCCACATAAATATGAATAATTAGGAAGA  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAAGTTGTCAGATAAGAATCCACATAAATATGAATAATTAGGAAGA  447

seq1  CATTTTAATGGGATGGAATAAACAATAGAATATTAGACTAGTTCTTCTGG  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAATGGGATGGAATAAACAATAGAATATTAGACTAGTTCTTCTGG  497

seq1  ATGTATTCTTAAATTACTGTATTAAAATGAAGGTGTTCAGTATCTATTCT  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATTCTTAAATTACTGTATTAAAATGAAGGTGTTCAGTATCTATTCT  547

seq1  TGTTTTCTGATGTTTGTGGTTATCTAGCTGTGGCAGTGGCAGTGCCTTTT  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCTGATGTTTGTGGTTATCTAGCTGTGGCAGTGGCAGTGCCTTTT  597

seq1  TTGTTTGTTTTCCTTTCCTGATTTTTCTCTGTTTATCTACAAATTTATTA  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTTTTCCTTTCCTGATTTTTCTCTGTTTATCTACAAATTTATTA  647

seq1  GACAATATTTGAAAGTAACACCATATATATATATATGTATATATATATAT  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATATTTGAAAGTAACACCATATATATATATATGTATATATATATAT  697

seq1  ATATATATATACACACGCATGTATATATGTATATATATATATATAGTGTG  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATACACACGCATGTATATATGTATATATATATATATAGTGTG  747

seq1  TGTGTGTGTGTGTGTGTGTGTATGTGTGTATGTGTGTGCACACGCTGTGT  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTATGTGTGTATGTGTGTGCACACGCTGTGT  797

seq1  ATGTATATATATATGTAGAACAGTTTCGGTTCATTAGAATGGCTGCTCTG  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATATATATATGTAGAACAGTTTCGGTTCATTAGAATGGCTGCTCTG  847

seq1  GCAGGAAATTGCATCAGAGACCTACATGGACCAGCTGGCATGCAGAAATG  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAAATTGCATCAGAGACCTACATGGACCAGCTGGCATGCAGAAATG  897

seq1  CCACAGACCCTTATTCTCTCTGGCAGGACGACACACCTTTAAGGTAAGAT  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGACCCTTATTCTCTCTGGCAGGACGACACACCTTTAAGGTAAGAT  947

seq1  TAGTTTGTAGAAGCAAGTAGCCATGTTTGAAAGTGAGGGGCAGACAAAAT  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTGTAGAAGCAAGTAGCCATGTTTGAAAGTGAGGGGCAGACAAAAT  997

seq1  AAAGAATCTGAGAAATATTTAAATGAATGAATCAGAGATAGAATATGCCC  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATCTGAGAAATATTTAAATGAATGAATCAGAGATAGAATATGCCC  1047

seq1  AAGTCTCACAAGAACAGCACAGGAAAGAAGCTATTTACAAACAGCACAAA  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTCACAAGAACAGCACAGGAAAGAAGCTATTTACAAACAGCACAAA  1097

seq1  GAAAGAAAAACAGTTGGAAGTTGAGTCAGTTGTGAGTCAGTTCAGAGGAG  1134
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAAACAGTTGGAAGTTGAGTCAGTTGTGAGTCAGTTCAGAGGAG  1147

seq1  TGGAGTTGAATCAGTGCAACGAGTGCATTTGGTGAACTGCAATTGAGTTC  1184
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTTGAATCAGTGCAACGAGTGCATTTGGTGAACTGCAATTGAGTTC  1197

seq1  AACTGAATTC  1194
      ||||||||||
seq2  AACTGAATTC  1207


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