BAC Information

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BAC

Clone NameB6Ng01-235L08
Chromosome4 (Build37)
Map Location 20,043,632 - 20,044,765
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC435772, Cngb3, LOC623122, Cpne3, LOC100040306, 2410005O16Rik, Wwp1, Slc7a13, Atp6v0d2, LOC667282, Ttpa, LOC667301, EG664800
Downstream geneE130310K16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-235L08.bB6Ng01-235L08.g
ACCGA047116GA047117
length1,135976
definitionB6Ng01-235L08.b B6Ng01-235L08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagacaccttcagaggccaaagggggaagtaagatcctctggaac
tacaattacaggcagttgtgagttactgaatgtggacaacttatcttggg
tcctttgccagggctgcaggcaagcactacacacttaatcatcctgagat
tgacttaacattgaagcatctcttttgccccttgcttatataaattttta
aaaatgacatcttgctattctgctcaaggtggctttatacttctggcctc
aagcaatccttccacctcaggctcctgtattagagtccaactcacctaat
cattttgaaattatcaggcactacctagatttggaggcaatgtatgctca
gagagtctatgagcagcactcttcagtttcccagatcattccctagagtg
ttgttgaataagcagtatctggggcacacggttcaggaagagggcacagt
aaagtctaatgataaaattttttataattttaagtttctcaaaaataatg
tatttttttccaagaaaaaaagtgaaaagagattgaccaacttaaaaaaa
aaaaatgtacttttttttttcatttagttgtcatagtgctggcaatcaaa
tctaggatcttggcttcagtgacagccatgtgctccaccactgaagtcca
tttccagacccgcttttaaacgttaaacttcacagcaacaacaacccctt
tcttcttctcctcctctttctcccttttcctctccttccttcttttcttt
ctcttccgtttttaatcttcgtgacagactctcactaagccacctaggct
gctcttgaatttgtgtttattcagccccaacctcccatgtagtagaggtt
ataggtctgtgccaccatgagtagctgagctcaactttaacacagaggaa
atagcagaatacaaaagtttaaatggagagaaactcgaagtaaattccac
atgaatcaggaacaagagacagatgtacaaaaagatcacacatgtaaaca
cacactacctgtccctgattccactttactaggcacttgttatactctag
gtacttgtcattaaatagcaataaattaaagaacttatggatcattagag
gatccctgtggaccagaagttcactgtttcgatga

gaattctttgtttagctctgagccccattttttatatttaaatttttatt
aatatatgcatataacatacaacacagtacacaagtaattacataataac
atatagaacatatagaaaattacaaacgtagctattgtcataggtggaca
tattcttttttttaatattttttttattatgtattttcctcaattacatt
tccaatgctatcccaaaagtcccccataccctcctcaccacttccctacc
cacccattcccattttttggccctggagttcccctgcagtggggcatata
aagtttgtatgtccaatgggcctctctttccattgatggccgactaggcc
atcttttgatacatatgcagctagagtccagagctctggggtactagtta
gttcataatattgttccacctttagctccttgggtactttctctagctcc
tccattgggagccctgtgatccatccattagctgactgtgagcatccact
tctgtgtttgctaggtcccggcatagtctcacatgagacagctatatctg
ggtcctttcagcaaaatcttgctagtgtatgcaatggtgtcagcgtttgg
aagctgattatggggtggatccctggatatggcagtctctagatggtcca
tccttttgtcacagctccaaactttgtctctgtaattccttccatgggtg
ttttgttcccaaattctaagaaggggcacagtgtccacaccatttttaaa
tggggttatttaagtttctggagttcagcttcttgagttctttgtaaata
ttggatattactcccctatcagatttaggattggtaaagatcctttccca
atctgttggtggcctttttgtcttgtaaacagtgtcatttgcctcataga
agctttgcaatttttgtctattcagagactgccccacttggggttctacc
tataaacaactaccaaaccagacact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_20043632_20044765
seq2: B6Ng01-235L08.b_44_1178

seq1  GAATTCAGACACCTTCAGAGGCCAAAGGGGGAAGTAAGATCCTCTGGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGACACCTTCAGAGGCCAAAGGGGGAAGTAAGATCCTCTGGAAC  50

seq1  TACAATTACAGGCAGTTGTGAGTTACTGAATGTGGACAACTTATCTTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATTACAGGCAGTTGTGAGTTACTGAATGTGGACAACTTATCTTGGG  100

seq1  TCCTTTGCCAGGGCTGCAGGCAAGCACTACACACTTAATCATCCTGAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGCCAGGGCTGCAGGCAAGCACTACACACTTAATCATCCTGAGAT  150

seq1  TGACTTAACATTGAAGCATCTCTTTTGCCCCTTGCTTATATAAATTTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTAACATTGAAGCATCTCTTTTGCCCCTTGCTTATATAAATTTTTA  200

seq1  AAAATGACATCTTGCTATTCTGCTCAAGGTGGCTTTATACTTCTGGCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGACATCTTGCTATTCTGCTCAAGGTGGCTTTATACTTCTGGCCTC  250

seq1  AAGCAATCCTTCCACCTCAGGCTCCTGTATTAGAGTCCAACTCACCTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAATCCTTCCACCTCAGGCTCCTGTATTAGAGTCCAACTCACCTAAT  300

seq1  CATTTTGAAATTATCAGGCACTACCTAGATTTGGAGGCAATGTATGCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGAAATTATCAGGCACTACCTAGATTTGGAGGCAATGTATGCTCA  350

seq1  GAGAGTCTATGAGCAGCACTCTTCAGTTTCCCAGATCATTCCCTAGAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTCTATGAGCAGCACTCTTCAGTTTCCCAGATCATTCCCTAGAGTG  400

seq1  TTGTTGAATAAGCAGTATCTGGGGCACACGGTTCAGGAAGAGGGCACAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGAATAAGCAGTATCTGGGGCACACGGTTCAGGAAGAGGGCACAGT  450

seq1  AAAGTCTAATGATAAAATTTTTTATAATTTTAAGTTTCTCAAAAATAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTAATGATAAAATTTTTTATAATTTTAAGTTTCTCAAAAATAATG  500

seq1  TATTTTTTTCCAAGAAAAAAAGTGAAAAGAGATTGACCAACTTAAAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTTCCAAGAAAAAAAGTGAAAAGAGATTGACCAACTTAAAAAAA  550

seq1  AAAAATGTACTTTTTTTTTTCATTTAGTTGTCATAGTGCTGGCAATCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGTACTTTTTTTTTTCATTTAGTTGTCATAGTGCTGGCAATCAAA  600

seq1  TCTAGGATCTTGGCTTCAGTGACAGCCATGTGCTCCACCACTGAAGTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGATCTTGGCTTCAGTGACAGCCATGTGCTCCACCACTGAAGTCCA  650

seq1  TTTCCAGACCCGCTTTTAAACGTTAAACTTCACAGCAACAACAACCCCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGACCCGCTTTTAAACGTTAAACTTCACAGCAACAACAACCCCTT  700

seq1  TCTTCTTCTCCTCCTCTTTCTCCCTTTTCCTCTCCTTCCTTCTTTTCTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTCTCCTCCTCTTTCTCCCTTTTCCTCTCCTTCCTTCTTTTCTTT  750

seq1  CTCTTCCGTTTTTAATCTTCGTGACAGACTCTCACTAAGCCACCTAGGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCGTTTTTAATCTTCGTGACAGACTCTCACTAAGCCACCTAGGCT  800

seq1  GCTCTTGAATTTGTGTTTATTCAGCCCCAACCTCCCATGTAGTAGAGGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTGAATTTGTGTTTATTCAGCCCCAACCTCCCATGTAGTAGAGGTT  850

seq1  ATAGGTCTGTGCCACCATGAGTAGCTGAGCTCAACTTTAACACAGAGGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTCTGTGCCACCATGAGTAGCTGAGCTCAACTTTAACACAGAGGAA  900

seq1  ATAGCAGAATACAAAAGTTTAAATGGAGAGAAACTCGAAGTAAA-TCCAC  949
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ATAGCAGAATACAAAAGTTTAAATGGAGAGAAACTCGAAGTAAATTCCAC  950

seq1  ATGAATCAGGAACAAGAGACAGATGTAC-AAAAGATCACACAATGTAAAC  998
      |||||||||||||||||||||||||||| |||||||||||| ||||||||
seq2  ATGAATCAGGAACAAGAGACAGATGTACAAAAAGATCACAC-ATGTAAAC  999

seq1  ACACACTACCTGT-CCTGA-TCCACTTTACTAAGCACT--GTATACTCTA  1044
      ||||||||||||| ||||| |||||||||||| |||||   |||||||||
seq2  ACACACTACCTGTCCCTGATTCCACTTTACTAGGCACTTGTTATACTCTA  1049

seq1  GGTACTTGTTCAATTAAATAGCAATAAAATAAAGACCTTATTGATCAATT  1094
      |||||||||   |||||||||||||||| |||||| ||||| |||||  |
seq2  GGTACTTGT--CATTAAATAGCAATAAATTAAAGAACTTATGGATCA--T  1095

seq1  AAGAAGAT-CCTGTGGAACAG-AGTTCAACTGTTTCAGATGA  1134
       ||| ||| |||||||| ||| ||||| |||||||| |||||
seq2  TAGAGGATCCCTGTGGACCAGAAGTTC-ACTGTTTC-GATGA  1135


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