BAC Information

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BAC

Clone NameB6Ng01-236H07
Chromosome4 (Build37)
Map Location 92,805,145 - 92,806,220
singlet/doubletsinglet
Overlap genenone
Upstream gene1700011H22Rik, LOC68280, LOC620269
Downstream geneLOC384125, Tusc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-236H07.bB6Ng01-236H07.g
ACCGA047669GA047670
length1,0841,204
definitionB6Ng01-236H07.b B6Ng01-236H07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagaagctaacctgcataaccaaacaacccaatcaaacaatggg
tcataaaactaaacaaagaattcacaacagaggagtctcaaatgaattag
aagcacttacagaaatgttcaaagcctttagtgatcagggaaatgcatat
caaaaggaccatgagatgccatcttacactaatcagaatggctaagaaca
aaaactcaggtgacaaaacatattggtgaggatgtggataaaaaggaaca
ctgctccattgctggtgggattgccaactggtgcaaccactcttctttct
ccacatctgctggggtaagtggaatccattagtgtaagtggaatctcagg
gtcattttgatttgcatttctctgatcactaagggatttgaacatttctt
ttggtgcttctcagacattcaagatttctcggttgtgagttatctgttta
gttctatatcccatgttttgattgggttatttggttttttggtgattaac
ttcttgagttctttatatattttggagattagccctctatcggaataggt
ttagtgaagactttttctcaatctgtgggttgcaaatttgtcctattgac
tatgttcttttgcttacagaatctttccggtttcatgaggttccatttat
caattcttgatcttagaccatgagccattgaaattctgtttaggaaattt
ctcctggtgccaatgatttcaaggcgttttcccacactctcttctactag
attcagtgtatccgattttatgttgaagtccttaatccacttggacttga
gctttatacaaggagacaaatatgggtctattttcattcttctacataca
gacagccagtaagaccagcaccatttattgaagatgctttctatttttcc
attgtatatttttggtggctttgtcaaagatcaagtgacctcgagtatgt
ggttttattttaagtcttcaattctatttcatgatcaatgtgtttaatag
tggttttagagtcaactttgactgaggaaaaagagaggatagaatatagg
actagctgagggaaaggactatagcttgaggatg

gaattcacggatgtacatatggggtatatctatgtaaatgcaaggttttg
ttctgaatgagagagatttggtcactgatatctatatatgtgtatacata
catacatacatacatacatacatacatacatacatataaatgtttgtata
tctaatttacatatagtatatagtagatatattagaaaataaaaatttac
taatcgatagaaaattttgtcattacatctttaattcttggtaaggtgaa
ctgactccatttaaataaagatttaaatcaaatcttttagtcctgctgtt
aggggtcctatgtgaagaccaagctgcaatttatttacatatgtacaaaa
gacctaggttcatctggttggtgattcagtctccatgagcccctatggtc
ccaagttaattgagtctataggtcttcttgtggtgtatttccatggatct
ttggctccttcaatcctttctacctctctttttcaagattttcagagctc
tgcctgatatttggctgtgggtctctgtatctgtttctatcatttgcaca
gtaaaacctctcagaggagagttatgctaggttcctgtatgcaaatatag
catagcagaatatcattaatagtgtcagaggtgggctctctcttgtggca
tggatctcaatatgggccagtcattggttgggtagtccttcaattcctgc
tttctctttatccctgcatatcttatatgcagagaaatctgccagtcaaa
ggttttgtgtctgggttggtgtccttattatttcattggaagttttgcct
ggttataggaagtggctatttcacgttccatagcccctactgcttagagt
cttggccagagtcaccctcacagattcctgggagttttcattgaccagat
ttctagtttatcccatagatgccccatccccactaattacaattctttct
cctgtcttcttcagctataaagcatgacatcatgaaatttgaagtcaatg
tatgggactatggttatcttctgagtgagataccaagaccagaaagacac
acatggtatatactcactgtaatggatatagctataagtacaggaaacca
tgctacatcacaatccagtgctaagcatttagagaatccaagggaaattg
ttgaacttactgtgaggggattaatacatgaaccatcgtgagtgacgaat
tgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_92805145_92806220
seq2: B6Ng01-236H07.b_44_1112

seq1  GAATTCAAGAAGCTAACCTGCATAACCAAACAACCCAATCAAACAATGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAAGCTAACCTGCATAACCAAACAACCCAATCAAACAATGGG  50

seq1  TCATAAAACTAAACAAAGAATTCACAACAGAGGAGTCTCAAATGAATTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAAACTAAACAAAGAATTCACAACAGAGGAGTCTCAAATGAATTAG  100

seq1  AAGCACTTACAGAAATGTTCAAAGCCTTTAGTGATCAGGGAAATGCATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACTTACAGAAATGTTCAAAGCCTTTAGTGATCAGGGAAATGCATAT  150

seq1  CAAAAGGACCATGAGATGCCATCTTACACTAATCAGAATGGCTAAGAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGGACCATGAGATGCCATCTTACACTAATCAGAATGGCTAAGAACA  200

seq1  AAAACTCAGGTGACAAAACATATTGGTGAGGATGTGGATAAAAAGGAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCAGGTGACAAAACATATTGGTGAGGATGTGGATAAAAAGGAACA  250

seq1  CTGCTCCATTGCTGGTGGGATTGCCAACTGGTGCAACCACTCTTCTTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCATTGCTGGTGGGATTGCCAACTGGTGCAACCACTCTTCTTTCT  300

seq1  CCACATCTGCTGGGGTAAGTGGAATCCATTAGTGTAAGTGGAATCTCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATCTGCTGGGGTAAGTGGAATCCATTAGTGTAAGTGGAATCTCAGG  350

seq1  GTCATTTTGATTTGCATTTCTCTGATCACTAAGGGATTTGAACATTTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTTGATTTGCATTTCTCTGATCACTAAGGGATTTGAACATTTCTT  400

seq1  TTGGTGCTTCTCAGACATTCAAGATTTCTCGGTTGTGAGTTATCTGTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGCTTCTCAGACATTCAAGATTTCTCGGTTGTGAGTTATCTGTTTA  450

seq1  GTTCTATATCCCATGTTTTGATTGGGTTATTTGGTTTTTTGGTGATTAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTATATCCCATGTTTTGATTGGGTTATTTGGTTTTTTGGTGATTAAC  500

seq1  TTCTTGAGTTCTTTATATATTTTGGAGATTAGCCCTCTATCGGAATAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGAGTTCTTTATATATTTTGGAGATTAGCCCTCTATCGGAATAGGT  550

seq1  TTAGTGAAGACTTTTTCTCAATCTGTGGGTTGCAAATTTGTCCTATTGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGAAGACTTTTTCTCAATCTGTGGGTTGCAAATTTGTCCTATTGAC  600

seq1  TATGTTCTTTTGCTTACAGAATCTTTCCGGTTTCATGAGGTTCCATTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTCTTTTGCTTACAGAATCTTTCCGGTTTCATGAGGTTCCATTTAT  650

seq1  CAATTCTTGATCTTAGACCATGAGCCATTGAAATTCTGTTTAGGAAATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCTTGATCTTAGACCATGAGCCATTGAAATTCTGTTTAGGAAATTT  700

seq1  CTCCTGGTGCCAATGATTTCAAGGCGTTTTCCCACACTCTCTTCTACTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGGTGCCAATGATTTCAAGGCGTTTTCCCACACTCTCTTCTACTAG  750

seq1  ATTCAGTGTATCCGATTTTATGTTGAAGTCCTTAATCCACTTGGACTTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTGTATCCGATTTTATGTTGAAGTCCTTAATCCACTTGGACTTGA  800

seq1  GCTTTATACAAGGAGACAAATATGGGTCTATTTTCATTCTTCTACATACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTATACAAGGAGACAAATATGGGTCTATTTTCATTCTTCTACATACA  850

seq1  GACAGCCAGTAAGACCAGCACCATTTATTGAAGATGCTTTCTATTTTTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCCAGTAAGACCAGCACCATTTATTGAAGATGCTTTCTATTTTTCC  900

seq1  ATTGTATATTTTTGGTGGCTTTGTCAAAGATCAAGTGACCTCGAGTATGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATATTTTTGGTGGCTTTGTCAAAGATCAAGTGACCTCGAGTATGT  950

seq1  GGTTTTATTTTTAAGTCTTCAATTCTATTTCATTGATCAATGTGTTTTAA  1000
      ||||||| |||||||||||||||||||||||| ||||||||||| |||||
seq2  GGTTTTA-TTTTAAGTCTTCAATTCTATTTCA-TGATCAATGTG-TTTAA  997

seq1  TAGTTGGTTTTAAGAGTCAAACTTTGACTGAGGAAAAAAGAGAGGATAG-  1049
      ||| ||||||| |||||| |||||||||||||| ||||||||||||||| 
seq2  TAG-TGGTTTT-AGAGTC-AACTTTGACTGAGG-AAAAAGAGAGGATAGA  1043

seq1  ATATAGGACTAGCTGAAGGAAAAGGAC  1076
      ||||||||||||||| ||| |||||||
seq2  ATATAGGACTAGCTG-AGGGAAAGGAC  1069


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