BAC Information

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BAC

Clone NameB6Ng01-237F04
Chromosome4 (Build37)
Map Location 90,596,872 - 90,598,001
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp352, LOC619842, LOC435792, Ppia-ps4_804.1
Downstream geneLOC664840, LOC664848, LOC100042274, Elavl2, LOC664864, LOC620016, LOC654475
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-237F04.bB6Ng01-237F04.g
ACCGA048313GA048314
length1,1951,127
definitionB6Ng01-237F04.b B6Ng01-237F04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctaaacagcccagactgttactaagactataaagtctctacaaa
ctgactgcaacatcttcaacagcacatgaagaagctgagctgatgcccat
gtagagcctttccccctacagtctagtgtatttgatacaggaaggcactc
ttcacaataaccaaagagaaatgcaaacatcaagccaaccaaccagaaac
ccttttatctacaatggtgtcctgcttgcaagatatgctagagtgattgt
ggcacaaaggtcatggggtaaccaccaatatctgatttgacctaagggtc
actccttgagatcgaaaccatacccactagtgcatggtttactaatgccc
gaagactaaatagcccagggatcaaaggtaaaactaaatactgttccttc
taaaacccaacaaaccaatcacaaactatagcagtaaaatgactcctaat
gcaattctgttatactcttagatcagggccttgctcaggtattcttatag
aggctttctcatgcagaagataggaacaaatacagagacccacagccaga
cactagacagagagtgaaagaccttagaatactcagttctgaactgaaca
tatccatcaaagccctaccctcagggctcagggaaccctgcagaagtgga
ggccgaaagagggtaagagccagaggggatggaggacactaagaaaacaa
gaaccgacacagacataaattcacagagacttgaggcagcatgcacaaag
cctacaaagatctgcattaagttgtttgcctctattatggcttccagtct
agtgtttctataagatttctgaatatgagaataagaggttctttgtttcc
tttgccttctactaggctctttttctgtttctttgttttacctaaatctg
atgtgttacttttcattttatcttatattttatttcactattatctttta
aaataaaatatacagtaaaggaatgaattggccacatactaccaaatagt
cacagtatgttattatgaaaagacttgtatatgagtgcataagagtacat
agatcagtaaaaatatgtgaattcctgataacatggctatgtttttattt
gcaaggcagattccataggtaggagtaggctctttaaattcgttcgtgcc
attgctgaaccctcatgagttacaggctgaacaccacaaaattat
gaattccaaagcaagtgaggcaagatctgtgttaatctgataatcctaaa
gaagaatcttgacaaaatgtcaaatactgtgcttatgagcctctgaaagt
ccctaaatctgaacaactacttcactaaagggatgaaagcgagggaagga
aggccatgcaatccttgatgcacccactaatgtggaggaaggaaatacta
atgaatgttaactactcatctggcccctcaggagttgactaataccctcg
agtaagactcttaaaagatatccagagttcccatttacaatgtagatcca
ttggtcctttactgttatgtctattattggcattctgctgaatactgaag
cttggtctgccttgagtagtggaagtaggactagttatgtaaatagtata
gtgaaaattaaaaaattaagttccttctagggtgtgggcaatgatctggc
cacctgagtacactgagaaaccatataatgggggtggttatactactaag
gtttaccttgtatatcatcattgtagagttctgcctaagattcagctcct
gcctataacactgtagccaacattgctcaattgaaacaattgaggaaacc
tttacatacaacatcagaccttgataatatattttgtttcattattctag
tatttccttaaccactaagtcccaagactaattcaatctgcctgtaacca
tcagctgtagactttcagaatagttcccccaaggctatcttaccaatttt
actgtttttaaagaagatatgagttaggattttgctttgtaatttagaac
actcctgttaaaaggtatctttacatagatgatataaagctaagtttgaa
tatgttacaaacttagaaaagcaactggatgaacaggggggaaaaagcag
tagaaaggttctaacaacacaatggaacatccattctgttatgggatggg
aaaaggccactggaagccacatggttattgaatgaaaccttagttccagt
ggtggagctatctcctgtgaatttctgtctgagaagtatgtgattactgt
gtgggcaatttccactgccatggcttcactgatgatagaccactattgtg
atgaacaggatagtttcttaatgcagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_90596872_90598001
seq2: B6Ng01-237F04.g_67_1193

seq1  GAATTCCAAAGCAAGTGAGGCAAGATCTGTGTTAATCTGATAATCCTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAGCAAGTGAGGCAAGATCTGTGTTAATCTGATAATCCTAAA  50

seq1  GAAGAATCTTGACAAAATGTCAAATACTGTGCTTATGAGCCTCTGAAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATCTTGACAAAATGTCAAATACTGTGCTTATGAGCCTCTGAAAGT  100

seq1  CCCTAAATCTGAACAACTACTTCACTAAAGGGATGAAAGCGAGGGAAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAATCTGAACAACTACTTCACTAAAGGGATGAAAGCGAGGGAAGGA  150

seq1  AGGCCATGCAATCCTTGATGCACCCACTAATGTGGAGGAAGGAAATACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCATGCAATCCTTGATGCACCCACTAATGTGGAGGAAGGAAATACTA  200

seq1  ATGAATGTTAACTACTCATCTGGCCCCTCAGGAGTTGACTAATACCCTCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGTTAACTACTCATCTGGCCCCTCAGGAGTTGACTAATACCCTCG  250

seq1  AGTAAGACTCTTAAAAGATATCCAGAGTTCCCATTTACAATGTAGATCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGACTCTTAAAAGATATCCAGAGTTCCCATTTACAATGTAGATCCA  300

seq1  TTGGTCCTTTACTGTTATGTCTATTATTGGCATTCTGCTGAATACTGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCCTTTACTGTTATGTCTATTATTGGCATTCTGCTGAATACTGAAG  350

seq1  CTTGGTCTGCCTTGAGTAGTGGAAGTAGGACTAGTTATGTAAATAGTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTCTGCCTTGAGTAGTGGAAGTAGGACTAGTTATGTAAATAGTATA  400

seq1  GTGAAAATTAAAAAATTAAGTTCCTTCTAGGGTGTGGGCAATGATCTGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAATTAAAAAATTAAGTTCCTTCTAGGGTGTGGGCAATGATCTGGC  450

seq1  CACCTGAGTACACTGAGAAACCATATAATGGGGGTGGTTATACTACTAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGAGTACACTGAGAAACCATATAATGGGGGTGGTTATACTACTAAG  500

seq1  GTTTACCTTGTATATCATCATTGTAGAGTTCTGCCTAAGATTCAGCTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACCTTGTATATCATCATTGTAGAGTTCTGCCTAAGATTCAGCTCCT  550

seq1  GCCTATAACACTGTAGCCAACATTGCTCAATTGAAACAATTGAGGAAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTATAACACTGTAGCCAACATTGCTCAATTGAAACAATTGAGGAAACC  600

seq1  TTTACATACAACATCAGACCTTGATAATATATTTTGTTTCATTATTCTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATACAACATCAGACCTTGATAATATATTTTGTTTCATTATTCTAG  650

seq1  TATTTCCTTAACCACTAAGTCCCAAGACTAATTCAATCTGCCTGTAACCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCTTAACCACTAAGTCCCAAGACTAATTCAATCTGCCTGTAACCA  700

seq1  TCAGCTGTAGACTTTCAGAATAGTTCCCCCAAGGCTATCTTACCAATTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTGTAGACTTTCAGAATAGTTCCCCCAAGGCTATCTTACCAATTTT  750

seq1  ACTGTTTTTAAAGAAGATATGAGTTAGGATTTTGCTTTGTAATTTAGAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTTTTAAAGAAGATATGAGTTAGGATTTTGCTTTGTAATTTAGAAC  800

seq1  ACTCCTGTTAAAAGGTATCTTTACATAGATGATATAAAGCTAAGTTTGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTGTTAAAAGGTATCTTTACATAGATGATATAAAGCTAAGTTTGAA  850

seq1  TATGTTACAAACTTAGAAAAGCAACTGGATGAACAGGGGGGAAAAAGCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTACAAACTTAGAAAAGCAACTGGATGAACAGGGGGGAAAAAGCAG  900

seq1  TAGAAAGGTTCTAACAACACAATGGAACATCCATTCTGTTAT-GGATGGG  949
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TAGAAAGGTTCTAACAACACAATGGAACATCCATTCTGTTATGGGATGGG  950

seq1  AAAAGGCCACTGGAAGCCACATGGTTATTGAATGAAAACCTTAGTTCCAG  999
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AAAAGGCCACTGGAAGCCACATGGTTATTGAATG-AAACCTTAGTTCCAG  999

seq1  TGGT-GAGCTATCTCCTTGTGAATTTCTGTCTGAGGAAGTATGTGGATAC  1048
      |||| ||||||||||| ||||||||||||||||| ||||||||||  |||
seq2  TGGTGGAGCTATCTCC-TGTGAATTTCTGTCTGA-GAAGTATGTGATTAC  1047

seq1  TGTGTGGGCAATTTCCACTGCCATTGGCTTCACTGAATGATTAGA-CACT  1097
      ||||||||||||||||||||||| ||||||||||| |||| |||| ||||
seq2  TGTGTGGGCAATTTCCACTGCCA-TGGCTTCACTG-ATGA-TAGACCACT  1094

seq1  ATTGTTGATG-ACAGGATAGTTCCTTATTGCAGG  1130
      |||| ||||| ||||||||||| |||| ||||||
seq2  ATTG-TGATGAACAGGATAGTTTCTTAATGCAGG  1127