BAC Information

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BAC

Clone NameB6Ng01-237I13
Chromosome4 (Build37)
Map Location 92,451,484 - 92,452,655
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC620016, LOC654475, 4930577H14Rik, LOC664886, 1700011H22Rik, LOC68280
Downstream geneLOC620269, LOC384125, Tusc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-237I13.bB6Ng01-237I13.g
ACCGA048465GA048466
length1,1671,174
definitionB6Ng01-237I13.b B6Ng01-237I13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatactgaatggctgagaagcacctgaaaaaatt
ctcagcatccttaatcatcagggaattgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaattcaggtgacagca
gatattggtgaggatgtggagaaagaagaaaactcctccattgttggtgg
gattgcaaacttgtacaaccactctggaaatcagtctggtggttcctcag
aaaattggacatagtactacctgaggatcccgcaaacctctcctgggcat
atatccagaagatgttccaacttgtaataaggacacatactccactatgt
ttatagcagcctcatttataatatccagaagctggaaagaacccagatgt
ctctcaatagaggaatggatacagaaaatgtggtacatttacacaatgga
gtactactcagctattaaaaagaatgaatttatgaaaatcctaggcaaat
gcatggacctggagggcatcatcctgagtgaggtaacccaatcacaaaag
aactcacatgatatgtactcactgataactggatattagcccagaaacaa
gatacagtttgcaaaacacatgaatctcaagaagaacgaagaccaaagtg
tagacacttcttagaattgggaacaaaacacacacagaatgagttacaga
caaagtttggagctgagacgaaaggatggaccatctagagactgtcatcc
ctggggacccatcccataatcagcctccaaatgctgacaccattgcatat
actagcaagattttactgaaaggactctgctatatctgtgtcttgtgagg
ctatgctggtgcctggcaaacacagaagtggatgcttacagtcagctatt
ggatggaacacaggacccccaatggaggagctagagaaagtacccaagga
gctaaagtgtctgcaaccctatagtggaacaacaatatgaactatccagt
agctccggaggtcgtgtttctagctgcatatgtagcagaagatggcctag
tgggaccatcattttgaagaggagggtcccttgggtcttgcaccttatta
tggcgtcataactggaatgccatggctagaaagtgcgaggtggggttgga
gtatactcaagatgtgg
gaattctttaaaagatatatgacattagaattttggtgggtattgtgttg
aatctctaatgtaattttggttatatagccatgtttatattaattcgggg
tattccataccattagcaaggtttccgttttataatagtttgtttaattt
ctattttaagtgtcttgaagttttcattgtggattgttttgactatttta
tttgcttattttttattttttgatttgttgatgatattctttcttccctt
tgtttaaaaatagatttattgatcatatatattctgattatggctttttc
accctcaactactcccagtttctccctcttccattcaaaactactttctt
ctgtatttcattataaaagaacagatttctaaggataacaataaaacata
acaaaatacaattatattatatactttattttattatttttttctggggc
ttccatgaatcagggttttaaaattttttccataaaatttggatatggag
gattacacttttgtgtagtttgtttatcactcaacctctctataaatggt
ctctaaatctttgagtattctagtatattttatgatgtcttttaactata
gaaacatgtttacaaataaaagcaatcttattcttccttttccagtttta
taccttcaatgtcttccttttgtccaaattttcaagctaagttttctagt
actatatttaaataaaagagaatagagttcacatccttgtcttactctga
tttggggaaaaattatttcaatgaagagtgggaaaatgtatggatttgtc
attatttgcaaagtatatgtgcacataaaaaagtctaaattccacaacat
attttttcactaaatgtgaatttctctgattcagttgatataagtcaatt
gtaggacagtgtagaatattgtagaatgcaataatgggttattatagcct
ttaaagtgtaattataaatgcttactttacaagctgaatgtaagatttta
attttattatatacaaaatataattaagagtgttatacaaatactaatga
atttctatatttaggatccacataattattccaaacctggggattcaacc
tatttttaataatttggagaaataatattccaatattgatgccatttttc
tttgtgcagttcaaccttaattta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_92451484_92452655
seq2: B6Ng01-237I13.g_63_1236 (reverse)

seq1  TAAAATAAGGTTG-ACTGCACAAAGAAAAAT-GCATCAAATATT-GAATA  47
      |||| |||||||| ||||||||||||||||| ||||| |||||| |||||
seq2  TAAATTAAGGTTGAACTGCACAAAGAAAAATGGCATC-AATATTGGAATA  49

seq1  TTATTTCTCAAAATT-TATAAAATAGTTTTAAATCCCAGGTTTTGAATAA  96
      ||||||||| ||||| |  ||||||| || ||  ||||||||| ||||||
seq2  TTATTTCTCCAAATTATTAAAAATAGGTTGAATCCCCAGGTTTGGAATAA  99

seq1  TTATGT-GATCTTAATTATAGAAATTTCATTTAGTATTTTGTATAACACT  145
      |||||| |||| ||| |||||||| |||| |||||| |||||||||||||
seq2  TTATGTGGATCCTAAATATAGAAA-TTCA-TTAGTA-TTTGTATAACACT  146

seq1  CTTAATTATATTTTGTATATAATAAAATTAAAATCTTACATTCAGCTTGT  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATTATATTTTGTATATAATAAAATTAAAATCTTACATTCAGCTTGT  196

seq1  AAAGTAAGCATTTATAATTACACTTTAAAGGCTATAATAA-CCATTATTG  244
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AAAGTAAGCATTTATAATTACACTTTAAAGGCTATAATAACCCATTATTG  246

seq1  CATTCTACAATATTCTACACTGTCCTACAATTGACTTATATCAACTGAAT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTACAATATTCTACACTGTCCTACAATTGACTTATATCAACTGAAT  296

seq1  CAGAGAAATTCACATTTAGTGAAAAAATATGTTGTGGAATTTAGACTTTT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAATTCACATTTAGTGAAAAAATATGTTGTGGAATTTAGACTTTT  346

seq1  TTATGTGCACATATACTTTGCAAATAATGACAAATCCATACATTTTCCCA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTGCACATATACTTTGCAAATAATGACAAATCCATACATTTTCCCA  396

seq1  CTCTTCATTGAAATAATTTTTCCCCAAATCAGAGTAAGACAAGGATGTGA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCATTGAAATAATTTTTCCCCAAATCAGAGTAAGACAAGGATGTGA  446

seq1  ACTCTATTCTCTTTTATTTAAATATAGTACTAGAAAACTTAGCTTGAAAA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTATTCTCTTTTATTTAAATATAGTACTAGAAAACTTAGCTTGAAAA  496

seq1  TTTGGACAAAAGGAAGACATTGAAGGTATAAAACTGGAAAAGGAAGAATA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGACAAAAGGAAGACATTGAAGGTATAAAACTGGAAAAGGAAGAATA  546

seq1  AGATTGCTTTTATTTGTAAACATGTTTCTATAGTTAAAAGACATCATAAA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGCTTTTATTTGTAAACATGTTTCTATAGTTAAAAGACATCATAAA  596

seq1  ATATACTAGAATACTCAAAGATTTAGAGACCATTTATAGAGAGGTTGAGT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTAGAATACTCAAAGATTTAGAGACCATTTATAGAGAGGTTGAGT  646

seq1  GATAAACAAACTACACAAAAGTGTAATCCTCCATATCCAAATTTTATGGA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAACAAACTACACAAAAGTGTAATCCTCCATATCCAAATTTTATGGA  696

seq1  AAAAATTTTAAAACCCTGATTCATGGAAGCCCCAGAAAAAAATAATAAAA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTTTAAAACCCTGATTCATGGAAGCCCCAGAAAAAAATAATAAAA  746

seq1  TAAAGTATATAATATAATTGTATTTTGTTATGTTTTATTGTTATCCTTAG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTATATAATATAATTGTATTTTGTTATGTTTTATTGTTATCCTTAG  796

seq1  AAATCTGTTCTTTTATAATGAAATACAGAAGAAAGTAGTTTTGAATGGAA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGTTCTTTTATAATGAAATACAGAAGAAAGTAGTTTTGAATGGAA  846

seq1  GAGGGAGAAACTGGGAGTAGTTGAGGGTGAAAAAGCCATAATCAGAATAT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGAAACTGGGAGTAGTTGAGGGTGAAAAAGCCATAATCAGAATAT  896

seq1  ATATGATCAATAAATCTATTTTTAAACAAAGGGAAGAAAGAATATCATCA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATCAATAAATCTATTTTTAAACAAAGGGAAGAAAGAATATCATCA  946

seq1  ACAAATCAAAAAATAAAAAATAAGCAAATAAAATAGTCAAAACAATCCAC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATCAAAAAATAAAAAATAAGCAAATAAAATAGTCAAAACAATCCAC  996

seq1  AATGAAAACTTCAAGACACTTAAAATAGAAATTAAACAAACTATTATAAA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAAACTTCAAGACACTTAAAATAGAAATTAAACAAACTATTATAAA  1046

seq1  ACGGAAACCTTGCTAATGGTATGGAATACCCCGAATTAATATAAACATGG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGAAACCTTGCTAATGGTATGGAATACCCCGAATTAATATAAACATGG  1096

seq1  CTATATAACCAAAATTACATTAGAGATTCAACACAATACCCACCAAAATT  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATAACCAAAATTACATTAGAGATTCAACACAATACCCACCAAAATT  1146

seq1  CTAATGTCATATATCTTTTAAAGAATTC  1172
      ||||||||||||||||||||||||||||
seq2  CTAATGTCATATATCTTTTAAAGAATTC  1174