BAC Information

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BAC

Clone NameB6Ng01-237L23
Chromosome4 (Build37)
Map Location 37,461,785 - 37,585,960
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042132, LOC545600, LOC621458
Downstream geneLOC277771, LOC100039448
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-237L23.bB6Ng01-237L23.g
ACCGA048622GA048623
length1,040501
definitionB6Ng01-237L23.b B6Ng01-237L23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,461,785 - 37,462,496)(37,585,454 - 37,585,960)
sequence
gaattcaaaattcagagattttaagattcaaaaatcataggaaacaattc
aaaatttcaaataagcattcaatattaaaatttaaataaaataatattaa
aattataagggactctatcaagtcatcaagtcacatacagcagcagatac
attctataagcaggtactatagattggtaaaggaattgttactcatgagg
atataagaattataaatcttgtctctgtaactccttccatgggtgattgt
ttccaattataagaaggaggaaagtgtccacactttggtcttcgttcttc
ttcagtttcatgtgttttgcatcttgtaccttatatctcgctatactaag
tttctgggctaatatccacttatcagtgagtacatttcatttgagttctt
ttgtgattgggttacctcactcaggatgatgccctccaggtccatccatt
tgcctaggaatttcataaattcattctttttaatagctgagtagtactcc
attgtgtaaatgaactacattttctgtagtttttatcatacagatctttg
acttccctagttaaagtcacaccaagatattttatattatttgtgactat
tgagaagggtgttgtttccctaatttctttctcagcctgtttattctttg
tgtagagaaaggccattgactagtttgagttaattttgtatccagctact
tcaccgaagctgtttatcaggtttaggagttctctggtggaatttttagg
gtcacttatatatactatcatatcatctgcaaaaagtgatattttgactt
cctcttttccaatttgtatccccttgatctccttttgttgtcgaattgct
ctggctaggacttcaagtactatgttgaagaggtagggagaaagtggaca
gccttgtctagtccctgattttagttggattgcttccagcttatcaccat
ttactttgatgttggctactgggtttgctgtagattgctttattatgtta
ggtatgggccttgaattcctgatctttccaagactttatc

agtctcatccaaaacttgataatatgtgtaaagcataactatatatttca
ctggtgtatgacatgtgtattgtctacctaatttacttcctttagtctcc
tctgtcacatctgaaatcttgagtaaaatcttcattcttggtatttctat
taatattctgtcttctgatctttttttccagaatttctcaatggaatctg
cttttctagaacctcccaacccccaccaaaatctttcaaattttatttct
gcagaacaacttcaaaagtctaagagccacattttcacattctcataagc
accttcctcttactacaaaggactttataaacttcatcaggaaatgtata
ataattaaataaatataggctccaatctttttgagtttgttattaaaatt
tcaatctcctcaatttattataatcatggactaggcaagattttattaat
gagaagggtattccaaagtactaaactgttgcctgaatttatggtgtgtg
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_37461785_37462496
seq2: B6Ng01-237L23.b_46_757

seq1  GAATTCAAAATTCAGAGATTTTAAGATTCAAAAATCATAGGAAACAATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAATTCAGAGATTTTAAGATTCAAAAATCATAGGAAACAATTC  50

seq1  AAAATTTCAAATAAGCATTCAATATTAAAATTTAAATAAAATAATATTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTCAAATAAGCATTCAATATTAAAATTTAAATAAAATAATATTAA  100

seq1  AATTATAAGGGACTCTATCAAGTCATCAAGTCACATACAGCAGCAGATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATAAGGGACTCTATCAAGTCATCAAGTCACATACAGCAGCAGATAC  150

seq1  ATTCTATAAGCAGGTACTATAGATTGGTAAAGGAATTGTTACTCATGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTATAAGCAGGTACTATAGATTGGTAAAGGAATTGTTACTCATGAGG  200

seq1  ATATAAGAATTATAAATCTTGTCTCTGTAACTCCTTCCATGGGTGATTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGAATTATAAATCTTGTCTCTGTAACTCCTTCCATGGGTGATTGT  250

seq1  TTCCAATTATAAGAAGGAGGAAAGTGTCCACACTTTGGTCTTCGTTCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAATTATAAGAAGGAGGAAAGTGTCCACACTTTGGTCTTCGTTCTTC  300

seq1  TTCAGTTTCATGTGTTTTGCATCTTGTACCTTATATCTCGCTATACTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTTCATGTGTTTTGCATCTTGTACCTTATATCTCGCTATACTAAG  350

seq1  TTTCTGGGCTAATATCCACTTATCAGTGAGTACATTTCATTTGAGTTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGGCTAATATCCACTTATCAGTGAGTACATTTCATTTGAGTTCTT  400

seq1  TTGTGATTGGGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGATTGGGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCATT  450

seq1  TGCCTAGGAATTTCATAAATTCATTCTTTTTAATAGCTGAGTAGTACTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTAGGAATTTCATAAATTCATTCTTTTTAATAGCTGAGTAGTACTCC  500

seq1  ATTGTGTAAATGAACTACATTTTCTGTAGTTTTTATCATACAGATCTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGTAAATGAACTACATTTTCTGTAGTTTTTATCATACAGATCTTTG  550

seq1  ACTTCCCTAGTTAAAGTCACACCAAGATATTTTATATTATTTGTGACTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCCTAGTTAAAGTCACACCAAGATATTTTATATTATTTGTGACTAT  600

seq1  TGAGAAGGGTGTTGTTTCCCTAATTTCTTTCTCAGCCTGTTTATTCTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGGGTGTTGTTTCCCTAATTTCTTTCTCAGCCTGTTTATTCTTTG  650

seq1  TGTAGAGAAAGGCCATTGACTAGTTTGAGTTAATTTTGTATCCAGCTACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAGAAAGGCCATTGACTAGTTTGAGTTAATTTTGTATCCAGCTACT  700

seq1  TCACCGAAGCTG  712
      ||||||||||||
seq2  TCACCGAAGCTG  712


seq1: chr4_37585454_37585960
seq2: B6Ng01-237L23.g_64_570 (reverse)

seq1  ACACACACCATAAATTCAGGCAACAGTTTAGTACTTTGGAATACCCTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACCATAAATTCAGGCAACAGTTTAGTACTTTGGAATACCCTTCT  50

seq1  CATTAATAAAATCTTGCCTAGTCCATGATTATAATAAATTGAGGAGATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAATAAAATCTTGCCTAGTCCATGATTATAATAAATTGAGGAGATTG  100

seq1  AAATTTTAATAACAAACTCAAAAAGATTGGAGCCTATATTTATTTAATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTAATAACAAACTCAAAAAGATTGGAGCCTATATTTATTTAATTA  150

seq1  TTATACATTTCCTGATGAAGTTTATAAAGTCCTTTGTAGTAAGAGGAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACATTTCCTGATGAAGTTTATAAAGTCCTTTGTAGTAAGAGGAAGG  200

seq1  TGCTTATGAGAATGTGAAAATGTGGCTCTTAGACTTTTGAAGTTGTTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTATGAGAATGTGAAAATGTGGCTCTTAGACTTTTGAAGTTGTTCTG  250

seq1  CAGAAATAAAATTTGAAAGATTTTGGTGGGGGTTGGGAGGTTCTAGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATAAAATTTGAAAGATTTTGGTGGGGGTTGGGAGGTTCTAGAAAA  300

seq1  GCAGATTCCATTGAGAAATTCTGGAAAAAAAGATCAGAAGACAGAATATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATTCCATTGAGAAATTCTGGAAAAAAAGATCAGAAGACAGAATATT  350

seq1  AATAGAAATACCAAGAATGAAGATTTTACTCAAGATTTCAGATGTGACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAAATACCAAGAATGAAGATTTTACTCAAGATTTCAGATGTGACAG  400

seq1  AGGAGACTAAAGGAAGTAAATTAGGTAGACAATACACATGTCATACACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGACTAAAGGAAGTAAATTAGGTAGACAATACACATGTCATACACCA  450

seq1  GTGAAATATATAGTTATGCTTTACACATATTATCAAGTTTTGGATGAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAATATATAGTTATGCTTTACACATATTATCAAGTTTTGGATGAGAC  500

seq1  TGAATTC  507
      |||||||
seq2  TGAATTC  507


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