BAC Information

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BAC

Clone NameB6Ng01-238C12
Chromosome4 (Build37)
Map Location 91,411,908 - 91,412,546
singlet/doubletsinglet
Overlap genenone
Upstream genePpia-ps4_804.1, LOC664840, LOC664848, LOC100042274, Elavl2, LOC664864
Downstream geneLOC620016, LOC654475, 4930577H14Rik, LOC664886, 1700011H22Rik, LOC68280
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-238C12.bB6Ng01-238C12.g
ACCGA048926GA048927
length1,199991
definitionB6Ng01-238C12.b B6Ng01-238C12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcataattgaggaataccaaatggctgagaagcatctaaaaaaaaa
tgttcaacagccttggtcatccaagaaatgcaaatcaaaacaaccctgaa
attccacctcacaccagtcagaatggctaagatcaaaaactcaggtgaca
gcagatgctggcgagggtgtggagaaagaggaacactccactgctggtgg
gattgcaagctgatagaaccactctggaaatcagtttggcgattcctcag
aaatttgaacatattactaccacaggatctagtgataccactcctgggca
tatactcagaagatgttccaacatgtaataaggacacattctccactatg
ttcatagcagccttatttataatagccagaagctggaaagaacacagatg
tccgtcaacagaggaatggatacagaaaacgtggtacatttacacaatgg
agctattaaaaaatttaaaactcagctattaaaaacaatggattttttaa
attcttaggcaaatggatggatctggaagatatcattcagagtgagtgaa
cccaatcacaaaagcacactcatgatatgagctcactgatagacgtgaat
tgtctaaatataatagataaaaattccaggtaagattcaaaagctgattc
atgacagaatgctaactattcagacacctggttgagcttaaggactttgg
catattagagtttagaaggctcacgatcacaacattgagtataactgagg
ggactgattggttattatcaaaatttattgaaaggaaaaaattttaaatg
atgatatacaaggaataaattggtccaacatcattagaaaataattcagc
attatttatatatgcttttaaatgtgtatactggcatggatataactgaa
gagactcatttgcttcatgaccacctctagaaaggcatgggagtatcttt
aggctgagtgaagacatttgactatttgactatggctttctgtgctgtaa
gtttatttttgagtgaaatgctattgcaataaacaatttgactataattt
atttttaaaatatttttatgaataaatagatcttctcagtggcacaagtg
tagtctcctgacttccgctagctagacatgcctgccttcgacttaaggat
tcatatgggaacctaggacacctggctttcccttgttggagaggcatgc
gaattcacttactttctaatttcattgtcatatgctacacaggcatttct
tcttctagcatattacagtgcaattagaaggtgtcatgaatgaagcagaa
aataaccactcaatagaaaccaagaattttacttgttatgtaaaattata
cagagcatacctaaacatcaatgagaaaaaatgaaaagaaaaatataaat
accttgaagtgagtcaataaagatacataatattttaagatttgtaggac
agagtaaaagcaattataaaagaaaattttggcccttctgcccagttctt
tttgctggggcagactcctagctggtctgctcctgtgaagacaccatatc
ctgacctatcctagagtatccatttcatttagagcagttgaggatctgct
gcatgcagagcagttgacaccgcagggcaactgacctgacagactgaaag
cctccctggagttctgctgcacaaagggaaacagaaaccacaatcagtag
gaaccccagaagaacaccttcacacaggataacaacttgactgctccact
gaagatgcaatagtctgaaagtctcccaggagacctactgcagccagtgc
aacagatcagcagcttctttccccttctgaaaagcccctagttggaaggc
cccacaggtggtctgctacagtaagggctgcaggcctacagggaaacctg
aagcaacccaggtacaaaagaggcagactccagaaagagccaccagggat
atccagatggtgagaggcaagtgcaagacaataagcaacagaagccaata
tacatggacatcatcagaacccatttctcccaccacagcaaggcctgaat
acaccaacacactggaaattaagaatctgtcctaaaatcctatttcctga
agaataatagaatcctttaagaggatatcaataactcgctgaaagaaata
caggaaaacacaggtaaacaggtgatggaattgaataagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_91411908_91412546
seq2: B6Ng01-238C12.g_69_707

seq1  GAATTCACTTACTTTCTAATTTCATTGTCATATGCTACACAGGCATTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTACTTTCTAATTTCATTGTCATATGCTACACAGGCATTTCT  50

seq1  TCTTCTAGCATATTACAGTGCAATTAGAAGGTGTCATGAATGAAGCAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTAGCATATTACAGTGCAATTAGAAGGTGTCATGAATGAAGCAGAA  100

seq1  AATAACCACTCAATAGAAACCAAGAATTTTACTTGTTATGTAAAATTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACCACTCAATAGAAACCAAGAATTTTACTTGTTATGTAAAATTATA  150

seq1  CAGAGCATACCTAAACATCAATGAGAAAAAATGAAAAGAAAAATATAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCATACCTAAACATCAATGAGAAAAAATGAAAAGAAAAATATAAAT  200

seq1  ACCTTGAAGTGAGTCAATAAAGATACATAATATTTTAAGATTTGTAGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGAAGTGAGTCAATAAAGATACATAATATTTTAAGATTTGTAGGAC  250

seq1  AGAGTAAAAGCAATTATAAAAGAAAATTTTGGCCCTTCTGCCCAGTTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAAAAGCAATTATAAAAGAAAATTTTGGCCCTTCTGCCCAGTTCTT  300

seq1  TTTGCTGGGGCAGACTCCTAGCTGGTCTGCTCCTGTGAAGACACCATATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGGGGCAGACTCCTAGCTGGTCTGCTCCTGTGAAGACACCATATC  350

seq1  CTGACCTATCCTAGAGTATCCATTTCATTTAGAGCAGTTGAGGATCTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCTATCCTAGAGTATCCATTTCATTTAGAGCAGTTGAGGATCTGCT  400

seq1  GCATGCAGAGCAGTTGACACCGCAGGGCAACTGACCTGACAGACTGAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCAGAGCAGTTGACACCGCAGGGCAACTGACCTGACAGACTGAAAG  450

seq1  CCTCCCTGGAGTTCTGCTGCACAAAGGGAAACAGAAACCACAATCAGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTGGAGTTCTGCTGCACAAAGGGAAACAGAAACCACAATCAGTAG  500

seq1  GAACCCCAGAAGAACACCTTCACACAGGATAACAACTTGACTGCTCCACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCCAGAAGAACACCTTCACACAGGATAACAACTTGACTGCTCCACT  550

seq1  GAAGATGCAATAGTCTGAAAGTCTCCCAGGAGACCTACTGCAGCCAGTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATGCAATAGTCTGAAAGTCTCCCAGGAGACCTACTGCAGCCAGTGC  600

seq1  AACAGATCAGCAGCTTCTTTCCCCTTCTGAAAAGCCCCT  639
      |||||||||||||||||||||||||||||||||||||||
seq2  AACAGATCAGCAGCTTCTTTCCCCTTCTGAAAAGCCCCT  639